RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 PAXBP1Q9Y5B6 917 aa18.17■□□□□ 0.5
SNRNP35-204ENST00000527158 KDM3AQ9Y4C1 1321 aa18.17■□□□□ 0.5
SNRNP35-204ENST00000527158 SLC26A4O43511 780 aa18.17■□□□□ 0.5
SNRNP35-204ENST00000527158 TBC1D5Q92609 795 aa18.17■□□□□ 0.5
SNRNP35-204ENST00000527158 LARP4BQ92615 738 aaKnown RBP18.17■□□□□ 0.5
SNRNP35-204ENST00000527158 KLRG1Q96E93 195 aa18.17■□□□□ 0.5
SNRNP35-204ENST00000527158 AGBL1Q96MI9 1066 aa18.17■□□□□ 0.5
SNRNP35-204ENST00000527158 NT5C3AQ9H0P0 336 aa18.17■□□□□ 0.5
SNRNP35-204ENST00000527158 RPAP3Q9H6T3 665 aaPredicted RBP18.17■□□□□ 0.5
SNRNP35-204ENST00000527158 IMPACTQ9P2X3 320 aa18.17■□□□□ 0.5
SNRNP35-204ENST00000527158 PNMA2Q9UL42 364 aa18.17■□□□□ 0.5
SNRNP35-204ENST00000527158 FAM86B1E9PN63 330 aa18.16■□□□□ 0.5
SNRNP35-204ENST00000527158 RHOBTB3O94955 611 aa18.16■□□□□ 0.5
SNRNP35-204ENST00000527158 FAM86B2P0C5J1 330 aa18.16■□□□□ 0.5
SNRNP35-204ENST00000527158 ZNF18P17022 549 aa18.16■□□□□ 0.5
SNRNP35-204ENST00000527158 FILIP1Q7Z7B0 1213 aa18.16■□□□□ 0.5
SNRNP35-204ENST00000527158 ETNPPLQ8TBG4 499 aa18.16■□□□□ 0.5
SNRNP35-204ENST00000527158 MED15Q96RN5 788 aa18.16■□□□□ 0.5
SNRNP35-204ENST00000527158 RWDD2AQ9UIY3 292 aa18.16■□□□□ 0.5
SNRNP35-204ENST00000527158 ZHX2Q9Y6X8 837 aa18.16■□□□□ 0.5
SNRNP35-204ENST00000527158 CTIFO43310 598 aaKnown RBP18.15■□□□□ 0.5
SNRNP35-204ENST00000527158 KLRC4O43908 158 aa18.15■□□□□ 0.5
SNRNP35-204ENST00000527158 FDX1P10109 184 aa18.15■□□□□ 0.5
SNRNP35-204ENST00000527158 CCT6AP40227 531 aaKnown RBP18.15■□□□□ 0.5
SNRNP35-204ENST00000527158 STX17P56962 302 aa18.15■□□□□ 0.5
SNRNP35-204ENST00000527158 ASIC1P78348 528 aa18.15■□□□□ 0.5
SNRNP35-204ENST00000527158 DGKZQ13574 1117 aa18.15■□□□□ 0.5
SNRNP35-204ENST00000527158 STIM1Q13586 685 aa18.15■□□□□ 0.5
SNRNP35-204ENST00000527158 TPD52L1Q16890 204 aaPredicted RBP18.15■□□□□ 0.5
SNRNP35-204ENST00000527158 CCDC144BQ3MJ40 725 aa18.15■□□□□ 0.5
SNRNP35-204ENST00000527158 TMEM119Q4V9L6 283 aa18.15■□□□□ 0.5
SNRNP35-204ENST00000527158 MCF2L2Q86YR7 1114 aa18.15■□□□□ 0.5
SNRNP35-204ENST00000527158 RAD54LQ92698 747 aa18.15■□□□□ 0.5
SNRNP35-204ENST00000527158 NUDT12Q9BQG2 462 aa18.15■□□□□ 0.5
SNRNP35-204ENST00000527158 SLC38A10Q9HBR0 1119 aa18.15■□□□□ 0.5
SNRNP35-204ENST00000527158 BLOC1S4Q9NUP1 217 aa18.15■□□□□ 0.5
SNRNP35-204ENST00000527158 PPP1R9AQ9ULJ8 1098 aa18.15■□□□□ 0.5
SNRNP35-204ENST00000527158 CTNND2Q9UQB3 1225 aa18.15■□□□□ 0.5
SNRNP35-204ENST00000527158 STK24Q9Y6E0 443 aa18.15■□□□□ 0.5
SNRNP35-204ENST00000527158 ZNF536O15090 1300 aa18.15■□□□□ 0.5
SNRNP35-204ENST00000527158 C19orf81C9J6K1 198 aa18.15■□□□□ 0.5
SNRNP35-204ENST00000527158 ZBED4O75132 1171 aa18.15■□□□□ 0.5
SNRNP35-204ENST00000527158 PAK1Q13153 545 aa18.15■□□□□ 0.5
SNRNP35-204ENST00000527158 ERMNQ8TAM6 284 aa18.15■□□□□ 0.5
SNRNP35-204ENST00000527158 LENG9Q96B70 501 aa18.15■□□□□ 0.5
SNRNP35-204ENST00000527158 DCPSQ96C86 337 aaKnown RBP18.15■□□□□ 0.5
SNRNP35-204ENST00000527158 EXOC1Q9NV70 894 aa18.15■□□□□ 0.5
SNRNP35-204ENST00000527158 SBF1O95248 1867 aa18.15■□□□□ 0.5
SNRNP35-204ENST00000527158 GSDMDP57764 484 aa18.14■□□□□ 0.49
SNRNP35-204ENST00000527158 MCM6Q14566 821 aa18.14■□□□□ 0.49
SNRNP35-204ENST00000527158 HSP90AA4PQ58FG1 418 aa18.14■□□□□ 0.49
SNRNP35-204ENST00000527158 C9orf131Q5VYM1 1079 aa18.14■□□□□ 0.49
SNRNP35-204ENST00000527158 CPXCR1Q8N123 301 aa18.14■□□□□ 0.49
SNRNP35-204ENST00000527158 UIMC1Q96RL1 719 aa18.14■□□□□ 0.49
SNRNP35-204ENST00000527158 SAMSN1Q9NSI8 373 aaKnown RBP18.14■□□□□ 0.49
SNRNP35-204ENST00000527158 FZD1Q9UP38 647 aa18.14■□□□□ 0.49
SNRNP35-204ENST00000527158 GDAQ9Y2T3 454 aa18.14■□□□□ 0.49
SNRNP35-204ENST00000527158 DOCK1Q14185 1865 aa18.14■□□□□ 0.49
SNRNP35-204ENST00000527158 YBX3P16989 372 aaKnown RBP eCLIP18.14■□□□□ 0.49
SNRNP35-204ENST00000527158 PRCPP42785 496 aa18.14■□□□□ 0.49
SNRNP35-204ENST00000527158 HYIQ5T013 277 aa18.14■□□□□ 0.49
SNRNP35-204ENST00000527158 HAUS3Q68CZ6 603 aa18.14■□□□□ 0.49
SNRNP35-204ENST00000527158 GIMAP8Q8ND71 665 aaPredicted RBP18.14■□□□□ 0.49
SNRNP35-204ENST00000527158 NELFBQ8WX92 580 aa18.14■□□□□ 0.49
SNRNP35-204ENST00000527158 RABGAP1Q9Y3P9 1069 aa18.14■□□□□ 0.49
SNRNP35-204ENST00000527158 RIOK3O14730 519 aaKnown RBP18.13■□□□□ 0.49
SNRNP35-204ENST00000527158 MSH4O15457 936 aa18.13■□□□□ 0.49
SNRNP35-204ENST00000527158 PDE4DQ08499 809 aa18.13■□□□□ 0.49
SNRNP35-204ENST00000527158 NOL9Q5SY16 702 aaKnown RBP18.13■□□□□ 0.49
SNRNP35-204ENST00000527158 TMC6Q7Z403 805 aa18.13■□□□□ 0.49
SNRNP35-204ENST00000527158 SULF1Q8IWU6 871 aa18.13■□□□□ 0.49
SNRNP35-204ENST00000527158 SMAP1Q8IYB5 467 aaPredicted RBP18.13■□□□□ 0.49
SNRNP35-204ENST00000527158 ADSSL1Q8N142 457 aa18.13■□□□□ 0.49
SNRNP35-204ENST00000527158 RAVER2Q9HCJ3 691 aaKnown RBP18.13■□□□□ 0.49
SNRNP35-204ENST00000527158 ALAS1P13196 640 aa18.13■□□□□ 0.49
SNRNP35-204ENST00000527158 HSD17B4P51659 736 aa18.13■□□□□ 0.49
SNRNP35-204ENST00000527158 DPY19L2Q6NUT2 758 aa18.13■□□□□ 0.49
SNRNP35-204ENST00000527158 CYP2W1Q8TAV3 490 aa18.13■□□□□ 0.49
SNRNP35-204ENST00000527158 MAPK8IP1Q9UQF2 711 aa18.13■□□□□ 0.49
SNRNP35-204ENST00000527158 PVALEFA0A1B0GWK0 134 aa18.12■□□□□ 0.49
SNRNP35-204ENST00000527158 PPP1R2P41236 205 aa18.12■□□□□ 0.49
SNRNP35-204ENST00000527158 PRKG1Q13976 671 aa18.12■□□□□ 0.49
SNRNP35-204ENST00000527158 CNNM4Q6P4Q7 775 aa18.12■□□□□ 0.49
SNRNP35-204ENST00000527158 LRRC8AQ8IWT6 810 aa18.12■□□□□ 0.49
SNRNP35-204ENST00000527158 SAMD3Q8N6K7 520 aa18.12■□□□□ 0.49
SNRNP35-204ENST00000527158 CACTINQ8WUQ7 758 aaKnown RBP18.12■□□□□ 0.49
SNRNP35-204ENST00000527158 C12orf42Q96LP6 360 aa18.12■□□□□ 0.49
SNRNP35-204ENST00000527158 KCND1Q9NSA2 647 aa18.12■□□□□ 0.49
SNRNP35-204ENST00000527158 MAP3K20Q9NYL2 800 aaKnown RBP18.12■□□□□ 0.49
SNRNP35-204ENST00000527158 TMOD4Q9NZQ9 345 aa18.12■□□□□ 0.49
SNRNP35-204ENST00000527158 KIAA1024Q9UPX6 916 aa18.12■□□□□ 0.49
SNRNP35-204ENST00000527158 IGLV3-22A0A075B6J6 115 aa18.11■□□□□ 0.49
SNRNP35-204ENST00000527158 MYMKA6NI61 221 aa18.11■□□□□ 0.49
SNRNP35-204ENST00000527158 PSMA7O14818 248 aa18.11■□□□□ 0.49
SNRNP35-204ENST00000527158 STAT3P40763 770 aa18.11■□□□□ 0.49
SNRNP35-204ENST00000527158 HMGCS2P54868 508 aa18.11■□□□□ 0.49
SNRNP35-204ENST00000527158 ECM1Q16610 540 aa18.11■□□□□ 0.49
SNRNP35-204ENST00000527158 NCAPH2Q6IBW4 605 aa18.11■□□□□ 0.49
SNRNP35-204ENST00000527158 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.11■□□□□ 0.49
SNRNP35-204ENST00000527158 CLEC4DQ8WXI8 215 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms