RNA–Protein interactions for RNA: ENST00000526445.1

PDE4DIP-222, Transcript of phosphodiesterase 4D interacting protein, human

TSL 4

Gene PDE4DIP, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDE4DIP-222	ENST00000526445	GOLGA8B	A8MQT2	603 aa		13.16	□□□□□ -0.3
PDE4DIP-222	ENST00000526445	DCDC2C	A8MYV0	355 aa		13.16	□□□□□ -0.3
PDE4DIP-222	ENST00000526445	PQBP1	O60828	265 aa	Known RBP	13.16	□□□□□ -0.3
PDE4DIP-222	ENST00000526445	STAM2	O75886	525 aa		13.16	□□□□□ -0.3
PDE4DIP-222	ENST00000526445	CD4	P01730	458 aa		13.16	□□□□□ -0.3
PDE4DIP-222	ENST00000526445	TGFB3	P10600	412 aa		13.16	□□□□□ -0.3
PDE4DIP-222	ENST00000526445	CAST	P20810	708 aa	Known RBP	13.16	□□□□□ -0.3
PDE4DIP-222	ENST00000526445	FXR1	P51114	621 aa	Known RBP eCLIP	13.16	□□□□□ -0.3
PDE4DIP-222	ENST00000526445	FGD1	P98174	961 aa		13.16	□□□□□ -0.3
PDE4DIP-222	ENST00000526445	PURA	Q00577	322 aa	Known RBP	13.16	□□□□□ -0.3
PDE4DIP-222	ENST00000526445	ARHGAP1	Q07960	439 aa		13.16	□□□□□ -0.3
PDE4DIP-222	ENST00000526445	APOBR	Q0VD83	1088 aa		13.16	□□□□□ -0.3
PDE4DIP-222	ENST00000526445	ITGA7	Q13683	1181 aa		13.16	□□□□□ -0.3
PDE4DIP-222	ENST00000526445	LY6K	Q17RY6	165 aa		13.16	□□□□□ -0.3
PDE4DIP-222	ENST00000526445	USP17L6P	Q6QN14	398 aa		13.16	□□□□□ -0.3
PDE4DIP-222	ENST00000526445	FAM126B	Q8IXS8	530 aa		13.16	□□□□□ -0.3
PDE4DIP-222	ENST00000526445	IL31RA	Q8NI17	732 aa		13.16	□□□□□ -0.3
PDE4DIP-222	ENST00000526445	BRF1	Q92994	677 aa		13.16	□□□□□ -0.3
PDE4DIP-222	ENST00000526445	VTI1A	Q96AJ9	217 aa		13.16	□□□□□ -0.3
PDE4DIP-222	ENST00000526445	IL17RA	Q96F46	866 aa		13.16	□□□□□ -0.3
PDE4DIP-222	ENST00000526445	PSTPIP2	Q9H939	334 aa		13.16	□□□□□ -0.3
PDE4DIP-222	ENST00000526445	POLR3E	Q9NVU0	708 aa		13.16	□□□□□ -0.3
PDE4DIP-222	ENST00000526445	TBX21	Q9UL17	535 aa		13.16	□□□□□ -0.3
PDE4DIP-222	ENST00000526445		V9GY48	417 aa	Predicted RBP	13.16	□□□□□ -0.3
PDE4DIP-222	ENST00000526445	RANBP2	P49792	3224 aa	Known RBP	13.16	□□□□□ -0.3
PDE4DIP-222	ENST00000526445	hCG_1642624	A0A1W2PR95	340 aa		13.15	□□□□□ -0.3
PDE4DIP-222	ENST00000526445	hCG_1984214	I3L0E3	225 aa		13.15	□□□□□ -0.3
PDE4DIP-222	ENST00000526445	GH1	P01241	217 aa		13.15	□□□□□ -0.3
PDE4DIP-222	ENST00000526445	MYCL	P12524	364 aa	Predicted RBP	13.15	□□□□□ -0.3
PDE4DIP-222	ENST00000526445	ITGB8	P26012	769 aa		13.15	□□□□□ -0.3
PDE4DIP-222	ENST00000526445	CCND2	P30279	289 aa		13.15	□□□□□ -0.3
PDE4DIP-222	ENST00000526445	ADD1	P35611	737 aa	Known RBP	13.15	□□□□□ -0.3
PDE4DIP-222	ENST00000526445	METAP2	P50579	478 aa	Known RBP eCLIP	13.15	□□□□□ -0.3
PDE4DIP-222	ENST00000526445	MRPS9	P82933	396 aa	Known RBP	13.15	□□□□□ -0.3
PDE4DIP-222	ENST00000526445	MDM2	Q00987	491 aa	Predicted RBP	13.15	□□□□□ -0.3
PDE4DIP-222	ENST00000526445	BRDT	Q58F21	947 aa	Predicted RBP	13.15	□□□□□ -0.3
PDE4DIP-222	ENST00000526445	XRRA1	Q6P2D8	792 aa		13.15	□□□□□ -0.3
PDE4DIP-222	ENST00000526445	ZNF713	Q8N859	430 aa	Predicted RBP	13.15	□□□□□ -0.3
PDE4DIP-222	ENST00000526445	CUL5	Q93034	780 aa		13.15	□□□□□ -0.3
PDE4DIP-222	ENST00000526445	INPP4A	Q96PE3	977 aa	Predicted RBP	13.15	□□□□□ -0.3
PDE4DIP-222	ENST00000526445	LBHD1	Q9BQE6	289 aa	Predicted RBP	13.15	□□□□□ -0.3
PDE4DIP-222	ENST00000526445	MTG1	Q9BT17	334 aa	Predicted RBP	13.15	□□□□□ -0.3
PDE4DIP-222	ENST00000526445	UBE2O	Q9C0C9	1292 aa	Known RBP	13.15	□□□□□ -0.3
PDE4DIP-222	ENST00000526445	PCDH10	Q9P2E7	1040 aa		13.15	□□□□□ -0.3
PDE4DIP-222	ENST00000526445	SLC34A2	O95436	690 aa		13.14	□□□□□ -0.31
PDE4DIP-222	ENST00000526445	HOXD8	P13378	290 aa	Predicted RBP	13.14	□□□□□ -0.31
PDE4DIP-222	ENST00000526445	PDIA3	P30101	505 aa	Known RBP	13.14	□□□□□ -0.31
PDE4DIP-222	ENST00000526445	ICAM3	P32942	547 aa		13.14	□□□□□ -0.31
PDE4DIP-222	ENST00000526445	LAMC2	Q13753	1193 aa		13.14	□□□□□ -0.31
PDE4DIP-222	ENST00000526445	TOB2	Q14106	344 aa	Predicted RBP	13.14	□□□□□ -0.31
PDE4DIP-222	ENST00000526445	PCNX4	Q63HM2	1172 aa		13.14	□□□□□ -0.31
PDE4DIP-222	ENST00000526445	WWC2	Q6AWC2	1192 aa		13.14	□□□□□ -0.31
PDE4DIP-222	ENST00000526445	TYW1B	Q6NUM6	668 aa		13.14	□□□□□ -0.31
PDE4DIP-222	ENST00000526445	TDH	Q8IZJ6	230 aa		13.14	□□□□□ -0.31
PDE4DIP-222	ENST00000526445	SMARCC2	Q8TAQ2	1214 aa		13.14	□□□□□ -0.31
PDE4DIP-222	ENST00000526445	AFG1L	Q8WV93	481 aa		13.14	□□□□□ -0.31
PDE4DIP-222	ENST00000526445	BAD	Q92934	168 aa		13.14	□□□□□ -0.31
PDE4DIP-222	ENST00000526445	PRDM5	Q9NQX1	630 aa	Predicted RBP	13.14	□□□□□ -0.31
PDE4DIP-222	ENST00000526445	TMEM39A	Q9NV64	488 aa		13.14	□□□□□ -0.31
PDE4DIP-222	ENST00000526445	CYP46A1	Q9Y6A2	500 aa		13.14	□□□□□ -0.31
PDE4DIP-222	ENST00000526445	MRVI1	Q9Y6F6	885 aa		13.14	□□□□□ -0.31
PDE4DIP-222	ENST00000526445	KIAA1217	Q5T5P2	1943 aa		13.13	□□□□□ -0.31
PDE4DIP-222	ENST00000526445	SPATA31C2	B4DYI2	1134 aa		13.13	□□□□□ -0.31
PDE4DIP-222	ENST00000526445	STXBP3	O00186	592 aa		13.13	□□□□□ -0.31
PDE4DIP-222	ENST00000526445	PRPF3	O43395	683 aa	Known RBP	13.13	□□□□□ -0.31
PDE4DIP-222	ENST00000526445	EIF5B	O60841	1220 aa	Known RBP	13.13	□□□□□ -0.31
PDE4DIP-222	ENST00000526445	TIMP1	P01033	207 aa		13.13	□□□□□ -0.31
PDE4DIP-222	ENST00000526445	MMP3	P08254	477 aa		13.13	□□□□□ -0.31
PDE4DIP-222	ENST00000526445	ANAPC15	P60006	121 aa		13.13	□□□□□ -0.31
PDE4DIP-222	ENST00000526445	PSMC6	P62333	389 aa		13.13	□□□□□ -0.31
PDE4DIP-222	ENST00000526445	SP2	Q02086	613 aa		13.13	□□□□□ -0.31
PDE4DIP-222	ENST00000526445	NTRK3	Q16288	839 aa		13.13	□□□□□ -0.31
PDE4DIP-222	ENST00000526445	PFKFB3	Q16875	520 aa	Predicted RBP	13.13	□□□□□ -0.31
PDE4DIP-222	ENST00000526445	LRIT3	Q3SXY7	679 aa		13.13	□□□□□ -0.31
PDE4DIP-222	ENST00000526445	CELF3	Q5SZQ8	465 aa	Known RBP	13.13	□□□□□ -0.31
PDE4DIP-222	ENST00000526445	MYSM1	Q5VVJ2	828 aa		13.13	□□□□□ -0.31
PDE4DIP-222	ENST00000526445	PPP1R18	Q6NYC8	613 aa		13.13	□□□□□ -0.31
PDE4DIP-222	ENST00000526445	HEATR3	Q7Z4Q2	680 aa		13.13	□□□□□ -0.31
PDE4DIP-222	ENST00000526445	PPTC7	Q8NI37	304 aa		13.13	□□□□□ -0.31
PDE4DIP-222	ENST00000526445	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	13.13	□□□□□ -0.31	8e-6	■■■□□ 18.6
PDE4DIP-222	ENST00000526445	RIC8A	Q9NPQ8	531 aa		13.13	□□□□□ -0.31
PDE4DIP-222	ENST00000526445	BARHL2	Q9NY43	387 aa		13.13	□□□□□ -0.31
PDE4DIP-222	ENST00000526445	LTBP2	Q14767	1821 aa		13.13	□□□□□ -0.31
PDE4DIP-222	ENST00000526445	TLR3	O15455	904 aa	Known RBP	13.12	□□□□□ -0.31
PDE4DIP-222	ENST00000526445	MYL3	P08590	195 aa		13.12	□□□□□ -0.31
PDE4DIP-222	ENST00000526445	PTPN11	Q06124	597 aa	Predicted RBP	13.12	□□□□□ -0.31
PDE4DIP-222	ENST00000526445	SEMA3F	Q13275	785 aa		13.12	□□□□□ -0.31
PDE4DIP-222	ENST00000526445	PKN1	Q16512	942 aa		13.12	□□□□□ -0.31
PDE4DIP-222	ENST00000526445	NFRKB	Q6P4R8	1299 aa		13.12	□□□□□ -0.31
PDE4DIP-222	ENST00000526445	KAT2B	Q92831	832 aa		13.12	□□□□□ -0.31
PDE4DIP-222	ENST00000526445	ZNF274	Q96GC6	653 aa	Predicted RBP	13.12	□□□□□ -0.31
PDE4DIP-222	ENST00000526445	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	13.12	□□□□□ -0.31
PDE4DIP-222	ENST00000526445	SCN10A	Q9Y5Y9	1956 aa		13.11	□□□□□ -0.31
PDE4DIP-222	ENST00000526445	B4GALT4	O60513	344 aa		13.11	□□□□□ -0.31
PDE4DIP-222	ENST00000526445	PPFIA4	O75335	1185 aa		13.11	□□□□□ -0.31
PDE4DIP-222	ENST00000526445	SCG2	P13521	617 aa		13.11	□□□□□ -0.31
PDE4DIP-222	ENST00000526445	RAG1	P15918	1043 aa		13.11	□□□□□ -0.31
PDE4DIP-222	ENST00000526445	IFNAR1	P17181	557 aa		13.11	□□□□□ -0.31
PDE4DIP-222	ENST00000526445	UBA1	P22314	1058 aa	Known RBP	13.11	□□□□□ -0.31
PDE4DIP-222	ENST00000526445	CLK2	P49760	499 aa	Known RBP	13.11	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms