RNA–Protein interactions for RNA: ENST00000526055.5

TSPAN4-216, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 469 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-216ENST00000526055 ZBTB43O43298 467 aa21.27■■□□□ 1
TSPAN4-216ENST00000526055 TGFB3P10600 412 aa21.27■■□□□ 1
TSPAN4-216ENST00000526055 ITGB8P26012 769 aa21.27■■□□□ 1
TSPAN4-216ENST00000526055 FCHSD1Q86WN1 690 aa21.27■■□□□ 1
TSPAN4-216ENST00000526055 FBXL16Q8N461 479 aa21.27■■□□□ 1
TSPAN4-216ENST00000526055 PIBF1Q8WXW3 757 aa21.27■■□□□ 1
TSPAN4-216ENST00000526055 COPS5Q92905 334 aa21.27■■□□□ 1
TSPAN4-216ENST00000526055 DDX41Q9UJV9 622 aaKnown RBP21.27■■□□□ 1
TSPAN4-216ENST00000526055 MRVI1Q9Y6F6 885 aa21.27■■□□□ 1
TSPAN4-216ENST00000526055 SOX1O00570 391 aaPredicted RBP21.26■□□□□ 0.99
TSPAN4-216ENST00000526055 MYL3P08590 195 aa21.26■□□□□ 0.99
TSPAN4-216ENST00000526055 MYCLP12524 364 aaPredicted RBP21.26■□□□□ 0.99
TSPAN4-216ENST00000526055 PSMA5P28066 241 aa21.26■□□□□ 0.99
TSPAN4-216ENST00000526055 FPGSQ05932 587 aa21.26■□□□□ 0.99
TSPAN4-216ENST00000526055 ARHGAP1Q07960 439 aa21.26■□□□□ 0.99
TSPAN4-216ENST00000526055 LY6KQ17RY6 165 aa21.26■□□□□ 0.99
TSPAN4-216ENST00000526055 XRRA1Q6P2D8 792 aa21.26■□□□□ 0.99
TSPAN4-216ENST00000526055 SNX14Q9Y5W7 946 aa21.26■□□□□ 0.99
TSPAN4-216ENST00000526055 KIAA1217Q5T5P2 1943 aa21.25■□□□□ 0.99
TSPAN4-216ENST00000526055 LAMA2P24043 3122 aaKnown RBP21.25■□□□□ 0.99
TSPAN4-216ENST00000526055 SUPT20HL2P0C7V6 817 aa21.25■□□□□ 0.99
TSPAN4-216ENST00000526055 FGD1P98174 961 aa21.25■□□□□ 0.99
TSPAN4-216ENST00000526055 PTPN11Q06124 597 aaPredicted RBP21.25■□□□□ 0.99
TSPAN4-216ENST00000526055 LAMC2Q13753 1193 aa21.25■□□□□ 0.99
TSPAN4-216ENST00000526055 RTN1Q16799 776 aa21.25■□□□□ 0.99
TSPAN4-216ENST00000526055 MFSD5Q6N075 450 aa21.25■□□□□ 0.99
TSPAN4-216ENST00000526055 NFRKBQ6P4R8 1299 aa21.25■□□□□ 0.99
TSPAN4-216ENST00000526055 BLOC1S2Q6QNY1 142 aa21.25■□□□□ 0.99
TSPAN4-216ENST00000526055 SMARCC2Q8TAQ2 1214 aa21.25■□□□□ 0.99
TSPAN4-216ENST00000526055 TCEANC2Q96MN5 208 aa21.25■□□□□ 0.99
TSPAN4-216ENST00000526055 JAKMIP1Q96N16 626 aaKnown RBP21.25■□□□□ 0.99
TSPAN4-216ENST00000526055 BRPF3Q9ULD4 1205 aa21.25■□□□□ 0.99
TSPAN4-216ENST00000526055 CCDC196A0A1B0GTZ2 297 aa21.24■□□□□ 0.99
TSPAN4-216ENST00000526055 RGS20O76081 388 aa21.24■□□□□ 0.99
TSPAN4-216ENST00000526055 MMP3P08254 477 aa21.24■□□□□ 0.99
TSPAN4-216ENST00000526055 CASTP20810 708 aaKnown RBP21.24■□□□□ 0.99
TSPAN4-216ENST00000526055 PSMC6P62333 389 aa21.24■□□□□ 0.99
TSPAN4-216ENST00000526055 PPIGQ13427 754 aaKnown RBP eCLIP21.24■□□□□ 0.99
TSPAN4-216ENST00000526055 GNPTABQ3T906 1256 aa21.24■□□□□ 0.99
TSPAN4-216ENST00000526055 CMTR1Q8N1G2 835 aaKnown RBP21.24■□□□□ 0.99
TSPAN4-216ENST00000526055 TMEM199Q8N511 208 aa21.24■□□□□ 0.99
TSPAN4-216ENST00000526055 PPTC7Q8NI37 304 aa21.24■□□□□ 0.99
TSPAN4-216ENST00000526055 AFG1LQ8WV93 481 aa21.24■□□□□ 0.99
TSPAN4-216ENST00000526055 ALDH8A1Q9H2A2 487 aaPredicted RBP21.24■□□□□ 0.99
TSPAN4-216ENST00000526055 PSTPIP2Q9H939 334 aa21.24■□□□□ 0.99
TSPAN4-216ENST00000526055 SCN10AQ9Y5Y9 1956 aa21.24■□□□□ 0.99
TSPAN4-216ENST00000526055 KLF18A0A0U1RQI7 1052 aa21.23■□□□□ 0.99
TSPAN4-216ENST00000526055 hCG_1984214I3L0E3 225 aa21.23■□□□□ 0.99
TSPAN4-216ENST00000526055 MEIS2O14770 477 aa21.23■□□□□ 0.99
TSPAN4-216ENST00000526055 SHHQ15465 462 aa21.23■□□□□ 0.99
TSPAN4-216ENST00000526055 DGKDQ16760 1214 aa21.23■□□□□ 0.99
TSPAN4-216ENST00000526055 RAB11FIP4Q86YS3 637 aa21.23■□□□□ 0.99
TSPAN4-216ENST00000526055 DHX37Q8IY37 1157 aaKnown RBP21.23■□□□□ 0.99
TSPAN4-216ENST00000526055 ZNF713Q8N859 430 aaPredicted RBP21.23■□□□□ 0.99
TSPAN4-216ENST00000526055 IL31RAQ8NI17 732 aa21.23■□□□□ 0.99
TSPAN4-216ENST00000526055 LRCH3Q96II8 777 aa21.23■□□□□ 0.99
TSPAN4-216ENST00000526055 CNTNAP5Q8WYK1 1306 aa21.23■□□□□ 0.99
TSPAN4-216ENST00000526055 GOLGA8AA7E2F4 631 aa21.22■□□□□ 0.99
TSPAN4-216ENST00000526055 GOLGA8BA8MQT2 603 aa21.22■□□□□ 0.99
TSPAN4-216ENST00000526055 B4GALT4O60513 344 aa21.22■□□□□ 0.99
TSPAN4-216ENST00000526055 RPS6KB1P23443 525 aa21.22■□□□□ 0.99
TSPAN4-216ENST00000526055 ICAM3P32942 547 aa21.22■□□□□ 0.99
TSPAN4-216ENST00000526055 FUT2Q10981 343 aa21.22■□□□□ 0.99
TSPAN4-216ENST00000526055 PCNX4Q63HM2 1172 aa21.22■□□□□ 0.99
TSPAN4-216ENST00000526055 PPP1R18Q6NYC8 613 aa21.22■□□□□ 0.99
TSPAN4-216ENST00000526055 CCDC82Q8N4S0 544 aa21.22■□□□□ 0.99
TSPAN4-216ENST00000526055 INPP4AQ96PE3 977 aaPredicted RBP21.22■□□□□ 0.99
TSPAN4-216ENST00000526055 AGXT2Q9BYV1 514 aa21.22■□□□□ 0.99
TSPAN4-216ENST00000526055 HIPK3Q9H422 1215 aa21.22■□□□□ 0.99
TSPAN4-216ENST00000526055 COL6A3P12111 3177 aa21.21■□□□□ 0.99
TSPAN4-216ENST00000526055 HOXD8P13378 290 aaPredicted RBP21.21■□□□□ 0.99
TSPAN4-216ENST00000526055 NBPF20Q3BBV1 942 aa21.21■□□□□ 0.99
TSPAN4-216ENST00000526055 C9orf50Q5SZB4 431 aa21.21■□□□□ 0.99
TSPAN4-216ENST00000526055 CELF3Q5SZQ8 465 aaKnown RBP21.21■□□□□ 0.99
TSPAN4-216ENST00000526055 USP17L6PQ6QN14 398 aa21.21■□□□□ 0.99
TSPAN4-216ENST00000526055 Q6ZUG5 572 aa21.21■□□□□ 0.99
TSPAN4-216ENST00000526055 KATNAL1Q9BW62 490 aa21.21■□□□□ 0.99
TSPAN4-216ENST00000526055 NID2Q14112 1375 aa21.21■□□□□ 0.99
TSPAN4-216ENST00000526055 PPFIA4O75335 1185 aa21.2■□□□□ 0.98
TSPAN4-216ENST00000526055 METAP2P50579 478 aaKnown RBP eCLIP21.2■□□□□ 0.98
TSPAN4-216ENST00000526055 MRPS9P82933 396 aaKnown RBP21.2■□□□□ 0.98
TSPAN4-216ENST00000526055 MYSM1Q5VVJ2 828 aa21.2■□□□□ 0.98
TSPAN4-216ENST00000526055 HEATR3Q7Z4Q2 680 aa21.2■□□□□ 0.98
TSPAN4-216ENST00000526055 SESTD1Q86VW0 696 aa21.2■□□□□ 0.98
TSPAN4-216ENST00000526055 NOC4LQ9BVI4 516 aaKnown RBP21.2■□□□□ 0.98
TSPAN4-216ENST00000526055 USP26Q9BXU7 913 aa21.2■□□□□ 0.98
TSPAN4-216ENST00000526055 GLT8D2Q9H1C3 349 aa21.2■□□□□ 0.98
TSPAN4-216ENST00000526055 TRPV6Q9H1D0 765 aa21.2■□□□□ 0.98
TSPAN4-216ENST00000526055 FAM217BQ9NTX9 383 aaPredicted RBP21.2■□□□□ 0.98
TSPAN4-216ENST00000526055 FIBPO43427 364 aa21.19■□□□□ 0.98
TSPAN4-216ENST00000526055 UBA1P22314 1058 aaKnown RBP21.19■□□□□ 0.98
TSPAN4-216ENST00000526055 NEDD9Q14511 834 aa21.19■□□□□ 0.98
TSPAN4-216ENST00000526055 FAM109BQ6ICB4 259 aaPredicted RBP21.19■□□□□ 0.98
TSPAN4-216ENST00000526055 BRF1Q92994 677 aa21.19■□□□□ 0.98
TSPAN4-216ENST00000526055 PPP1R12CQ9BZL4 782 aa21.19■□□□□ 0.98
TSPAN4-216ENST00000526055 EHMT1Q9H9B1 1298 aa21.19■□□□□ 0.98
TSPAN4-216ENST00000526055 hCG_1642624A0A1W2PR95 340 aa21.18■□□□□ 0.98
TSPAN4-216ENST00000526055 SPDYE3A6NKU9 549 aa21.18■□□□□ 0.98
TSPAN4-216ENST00000526055 SPATA31C2B4DYI2 1134 aa21.18■□□□□ 0.98
TSPAN4-216ENST00000526055 GGPS1O95749 300 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms