RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 X6R8D5 127 aa7.04□□□□□ -1.28
CSDE1-210ENST00000525878 TESK1Q15569 626 aa7.03□□□□□ -1.28
CSDE1-210ENST00000525878 FAM26FQ5R3K3 315 aa7.03□□□□□ -1.28
CSDE1-210ENST00000525878 E4F1Q66K89 784 aaPredicted RBP7.03□□□□□ -1.28
CSDE1-210ENST00000525878 CCDC103Q8IW40 242 aa7.03□□□□□ -1.28
CSDE1-210ENST00000525878 LGR4Q9BXB1 951 aa7.03□□□□□ -1.28
CSDE1-210ENST00000525878 KRTAP3-1Q9BYR8 98 aa7.03□□□□□ -1.28
CSDE1-210ENST00000525878 ACBD3Q9H3P7 528 aa7.03□□□□□ -1.28
CSDE1-210ENST00000525878 KIAA1522Q9P206 1035 aaPredicted RBP7.03□□□□□ -1.28
CSDE1-210ENST00000525878 SCG5P05408 212 aa7.02□□□□□ -1.29
CSDE1-210ENST00000525878 INSRRP14616 1297 aa7.02□□□□□ -1.29
CSDE1-210ENST00000525878 ITGA1P56199 1179 aa7.02□□□□□ -1.29
CSDE1-210ENST00000525878 ADAM17P78536 824 aa7.02□□□□□ -1.29
CSDE1-210ENST00000525878 RGL3Q3MIN7 710 aa7.02□□□□□ -1.29
CSDE1-210ENST00000525878 MROH9Q5TGP6 573 aa7.02□□□□□ -1.29
CSDE1-210ENST00000525878 NLRP10Q86W26 655 aa7.02□□□□□ -1.29
CSDE1-210ENST00000525878 FAM126BQ8IXS8 530 aa7.02□□□□□ -1.29
CSDE1-210ENST00000525878 TTLL6Q8N841 843 aa7.02□□□□□ -1.29
CSDE1-210ENST00000525878 TMEFF2Q9UIK5 374 aaPredicted RBP7.02□□□□□ -1.29
CSDE1-210ENST00000525878 PALD1Q9ULE6 856 aa7.02□□□□□ -1.29
CSDE1-210ENST00000525878 TIMM13Q9Y5L4 95 aaPredicted RBP7.02□□□□□ -1.29
CSDE1-210ENST00000525878 PLATP00750 562 aa7.01□□□□□ -1.29
CSDE1-210ENST00000525878 ATF4P18848 351 aaPredicted RBP7.01□□□□□ -1.29
CSDE1-210ENST00000525878 FPR2P25090 351 aa7.01□□□□□ -1.29
CSDE1-210ENST00000525878 TBC1D10BQ4KMP7 808 aaPredicted RBP7.01□□□□□ -1.29
CSDE1-210ENST00000525878 CD300LDQ6UXZ3 194 aa7.01□□□□□ -1.29
CSDE1-210ENST00000525878 KREMEN2Q8NCW0 462 aa7.01□□□□□ -1.29
CSDE1-210ENST00000525878 ANAPC16Q96DE5 110 aa7.01□□□□□ -1.29
CSDE1-210ENST00000525878 SSBP3Q9BWW4 388 aaPredicted RBP7.01□□□□□ -1.29
CSDE1-210ENST00000525878 SMPD4Q9NXE4 827 aa7.01□□□□□ -1.29
CSDE1-210ENST00000525878 TBX1O43435 398 aa7□□□□□ -1.29
CSDE1-210ENST00000525878 HOXC12P31275 282 aa7□□□□□ -1.29
CSDE1-210ENST00000525878 RPL11P62913 178 aaKnown RBP7□□□□□ -1.29
CSDE1-210ENST00000525878 KIAA2012Q0VF49 1180 aa7□□□□□ -1.29
CSDE1-210ENST00000525878 CR1LQ2VPA4 569 aa7□□□□□ -1.29
CSDE1-210ENST00000525878 ZC3H18Q86VM9 953 aaKnown RBP7□□□□□ -1.29
CSDE1-210ENST00000525878 TTC9BQ8N6N2 239 aa7□□□□□ -1.29
CSDE1-210ENST00000525878 BTN2A2Q8WVV5 523 aa7□□□□□ -1.29
CSDE1-210ENST00000525878 GPR20Q99678 358 aa7□□□□□ -1.29
CSDE1-210ENST00000525878 C1QTNF3Q9BXJ4 246 aa7□□□□□ -1.29
CSDE1-210ENST00000525878 TMPRSS5Q9H3S3 457 aa7□□□□□ -1.29
CSDE1-210ENST00000525878 BTG4Q9NY30 223 aa7□□□□□ -1.29
CSDE1-210ENST00000525878 INPP5FQ9Y2H2 1132 aa7□□□□□ -1.29
CSDE1-210ENST00000525878 MROH6A6NGR9 719 aa6.99□□□□□ -1.29
CSDE1-210ENST00000525878 C1QTNF3-AMACRE9PGA6 284 aa6.99□□□□□ -1.29
CSDE1-210ENST00000525878 CAPNS1P04632 268 aa6.99□□□□□ -1.29
CSDE1-210ENST00000525878 ITGAVP06756 1048 aa6.99□□□□□ -1.29
CSDE1-210ENST00000525878 BCL6P41182 706 aa6.99□□□□□ -1.29
CSDE1-210ENST00000525878 GTF2A2P52657 109 aa6.99□□□□□ -1.29
CSDE1-210ENST00000525878 PUM1Q14671 1186 aaKnown RBP eCLIP6.99□□□□□ -1.296e-8■□□□□ 8.8
CSDE1-210ENST00000525878 ACBD5Q5T8D3 534 aaPredicted RBP6.99□□□□□ -1.29
CSDE1-210ENST00000525878 CEP68Q76N32 757 aa6.99□□□□□ -1.29
CSDE1-210ENST00000525878 MILR1Q7Z6M3 343 aa6.99□□□□□ -1.29
CSDE1-210ENST00000525878 ZNF227Q86WZ6 799 aa6.99□□□□□ -1.29
CSDE1-210ENST00000525878 DIO2Q92813 273 aa6.99□□□□□ -1.29
CSDE1-210ENST00000525878 SAMD11Q96NU1 681 aa6.99□□□□□ -1.29
CSDE1-210ENST00000525878 NGRNQ9NPE2 291 aaKnown RBP6.99□□□□□ -1.29
CSDE1-210ENST00000525878 ZNF652Q9Y2D9 606 aa6.99□□□□□ -1.29
CSDE1-210ENST00000525878 UNCXA6NJT0 531 aa6.98□□□□□ -1.29
CSDE1-210ENST00000525878 KCNAB2Q13303 367 aa6.98□□□□□ -1.29
CSDE1-210ENST00000525878 ADAM9Q13443 819 aa6.98□□□□□ -1.29
CSDE1-210ENST00000525878 C6orf15Q6UXA7 325 aaPredicted RBP6.98□□□□□ -1.29
CSDE1-210ENST00000525878 STK32CQ86UX6 486 aa6.98□□□□□ -1.29
CSDE1-210ENST00000525878 LGI4Q8N135 537 aa6.98□□□□□ -1.29
CSDE1-210ENST00000525878 TXNDC5Q8NBS9 432 aaKnown RBP6.98□□□□□ -1.29
CSDE1-210ENST00000525878 RCBTB1Q8NDN9 531 aa6.98□□□□□ -1.29
CSDE1-210ENST00000525878 FBXL7Q9UJT9 491 aa6.98□□□□□ -1.29
CSDE1-210ENST00000525878 INVSQ9Y283 1065 aa6.98□□□□□ -1.29
CSDE1-210ENST00000525878 SMAD7O15105 426 aaKnown RBP6.97□□□□□ -1.29
CSDE1-210ENST00000525878 STAT5AP42229 794 aa6.97□□□□□ -1.29
CSDE1-210ENST00000525878 CPZQ66K79 652 aa6.97□□□□□ -1.29
CSDE1-210ENST00000525878 MCTP2Q6DN12 878 aa6.97□□□□□ -1.29
CSDE1-210ENST00000525878 FAM178BQ8IXR5 827 aa6.97□□□□□ -1.29
CSDE1-210ENST00000525878 PPP1R14AQ96A00 147 aa6.97□□□□□ -1.29
CSDE1-210ENST00000525878 TRMT2BQ96GJ1 504 aaKnown RBP6.97□□□□□ -1.29
CSDE1-210ENST00000525878 CCDC140Q96MF4 163 aa6.97□□□□□ -1.29
CSDE1-210ENST00000525878 C9orf118A6NHY6 69 aa6.96□□□□□ -1.3
CSDE1-210ENST00000525878 DDX3XO00571 662 aaKnown RBP eCLIP6.96□□□□□ -1.36e-27■■■□□ 16.5
CSDE1-210ENST00000525878 MEFVO15553 781 aaPredicted RBP6.96□□□□□ -1.3
CSDE1-210ENST00000525878 TADA3O75528 432 aa6.96□□□□□ -1.3
CSDE1-210ENST00000525878 CPP00450 1065 aa6.96□□□□□ -1.3
CSDE1-210ENST00000525878 ZNF28P17035 718 aa6.96□□□□□ -1.3
CSDE1-210ENST00000525878 TNFRSF1AP19438 455 aa6.96□□□□□ -1.3
CSDE1-210ENST00000525878 SF1Q15637 639 aaKnown RBP6.96□□□□□ -1.3
CSDE1-210ENST00000525878 EMC4Q5J8M3 183 aa6.96□□□□□ -1.3
CSDE1-210ENST00000525878 DENND5AQ6IQ26 1287 aa6.96□□□□□ -1.3
CSDE1-210ENST00000525878 C1orf159Q96HA4 380 aa6.96□□□□□ -1.3
CSDE1-210ENST00000525878 TMEM169Q96HH4 297 aa6.96□□□□□ -1.3
CSDE1-210ENST00000525878 CCSER2Q9H7U1 834 aa6.96□□□□□ -1.3
CSDE1-210ENST00000525878 H7BY64 318 aa6.95□□□□□ -1.3
CSDE1-210ENST00000525878 MYO1BO43795 1136 aa6.95□□□□□ -1.3
CSDE1-210ENST00000525878 SUSD5O60279 629 aa6.95□□□□□ -1.3
CSDE1-210ENST00000525878 SNRPB2P08579 225 aaKnown RBP6.95□□□□□ -1.3
CSDE1-210ENST00000525878 GFRA1P56159 465 aa6.95□□□□□ -1.3
CSDE1-210ENST00000525878 NKX3-2P78367 333 aa6.95□□□□□ -1.3
CSDE1-210ENST00000525878 PRSS53Q2L4Q9 553 aa6.95□□□□□ -1.3
CSDE1-210ENST00000525878 BORAQ6PGQ7 559 aa6.95□□□□□ -1.3
CSDE1-210ENST00000525878 FAM124AQ86V42 546 aa6.95□□□□□ -1.3
CSDE1-210ENST00000525878 ACTR10Q9NZ32 417 aa6.95□□□□□ -1.3
CSDE1-210ENST00000525878 TCRBV5S2A0A599 114 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms