RNA–Protein interactions for RNA: ENST00000525592.1

TM9SF1-204, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 3

Gene TM9SF1, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-204ENST00000525592 DDX41Q9UJV9 622 aaKnown RBP23.15■■□□□ 1.3
TM9SF1-204ENST00000525592 FRMPD4Q14CM0 1322 aa23.14■■□□□ 1.3
TM9SF1-204ENST00000525592 PLEKHA8P1O95397 391 aa23.14■■□□□ 1.29
TM9SF1-204ENST00000525592 CCND2P30279 289 aa23.14■■□□□ 1.29
TM9SF1-204ENST00000525592 SMAD3P84022 425 aaKnown RBP23.14■■□□□ 1.29
TM9SF1-204ENST00000525592 AFG1LQ8WV93 481 aa23.14■■□□□ 1.29
TM9SF1-204ENST00000525592 PIBF1Q8WXW3 757 aa23.14■■□□□ 1.29
TM9SF1-204ENST00000525592 LRRC2Q9BYS8 371 aa23.14■■□□□ 1.29
TM9SF1-204ENST00000525592 MMP3P08254 477 aa23.13■■□□□ 1.29
TM9SF1-204ENST00000525592 MYCLP12524 364 aaPredicted RBP23.13■■□□□ 1.29
TM9SF1-204ENST00000525592 PTPN11Q06124 597 aaPredicted RBP23.13■■□□□ 1.29
TM9SF1-204ENST00000525592 SYNE3Q6ZMZ3 975 aa23.13■■□□□ 1.29
TM9SF1-204ENST00000525592 DHX32Q7L7V1 743 aaKnown RBP23.13■■□□□ 1.29
TM9SF1-204ENST00000525592 FCHSD1Q86WN1 690 aa23.13■■□□□ 1.29
TM9SF1-204ENST00000525592 SRBD1Q8N5C6 995 aaKnown RBP23.13■■□□□ 1.29
TM9SF1-204ENST00000525592 FANCBQ8NB91 859 aa23.13■■□□□ 1.29
TM9SF1-204ENST00000525592 NOC4LQ9BVI4 516 aaKnown RBP23.13■■□□□ 1.29
TM9SF1-204ENST00000525592 PIK3CDO00329 1044 aa23.12■■□□□ 1.29
TM9SF1-204ENST00000525592 HMGB1P09429 215 aaKnown RBP23.12■■□□□ 1.29
TM9SF1-204ENST00000525592 TGFB3P10600 412 aa23.12■■□□□ 1.29
TM9SF1-204ENST00000525592 CSF2RAP15509 400 aa23.12■■□□□ 1.29
TM9SF1-204ENST00000525592 RXRAP19793 462 aa23.12■■□□□ 1.29
TM9SF1-204ENST00000525592 CYP2C18P33260 490 aa23.12■■□□□ 1.29
TM9SF1-204ENST00000525592 EXOSC10Q01780 885 aaKnown RBP23.12■■□□□ 1.29
TM9SF1-204ENST00000525592 LAMC2Q13753 1193 aa23.12■■□□□ 1.29
TM9SF1-204ENST00000525592 NBPF20Q3BBV1 942 aa23.12■■□□□ 1.29
TM9SF1-204ENST00000525592 PSRC1Q6PGN9 363 aaPredicted RBP23.12■■□□□ 1.29
TM9SF1-204ENST00000525592 TMTC3Q6ZXV5 915 aa23.12■■□□□ 1.29
TM9SF1-204ENST00000525592 Q7L0L9 218 aa23.12■■□□□ 1.29
TM9SF1-204ENST00000525592 MICU3Q86XE3 530 aa23.12■■□□□ 1.29
TM9SF1-204ENST00000525592 RASEFQ8IZ41 740 aa23.12■■□□□ 1.29
TM9SF1-204ENST00000525592 IL31RAQ8NI17 732 aa23.12■■□□□ 1.29
TM9SF1-204ENST00000525592 STAM2O75886 525 aa23.11■■□□□ 1.29
TM9SF1-204ENST00000525592 RGS20O76081 388 aa23.11■■□□□ 1.29
TM9SF1-204ENST00000525592 CASTP20810 708 aaKnown RBP23.11■■□□□ 1.29
TM9SF1-204ENST00000525592 DGKDQ16760 1214 aa23.11■■□□□ 1.29
TM9SF1-204ENST00000525592 APOA5Q6Q788 366 aa23.11■■□□□ 1.29
TM9SF1-204ENST00000525592 PPTC7Q8NI37 304 aa23.11■■□□□ 1.29
TM9SF1-204ENST00000525592 CUL5Q93034 780 aa23.11■■□□□ 1.29
TM9SF1-204ENST00000525592 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.11■■□□□ 1.29
TM9SF1-204ENST00000525592 TRMT13Q9NUP7 481 aaKnown RBP23.11■■□□□ 1.29
TM9SF1-204ENST00000525592 MTMR10Q9NXD2 777 aa23.11■■□□□ 1.29
TM9SF1-204ENST00000525592 FAM47CQ5HY64 1035 aa23.1■■□□□ 1.29
TM9SF1-204ENST00000525592 IL23AQ9NPF7 189 aa23.1■■□□□ 1.29
TM9SF1-204ENST00000525592 RBM28Q9NW13 759 aaKnown RBP23.1■■□□□ 1.29
TM9SF1-204ENST00000525592 COL6A3P12111 3177 aa23.1■■□□□ 1.29
TM9SF1-204ENST00000525592 ADCK5Q3MIX3 580 aa23.09■■□□□ 1.29
TM9SF1-204ENST00000525592 GNPTABQ3T906 1256 aa23.09■■□□□ 1.29
TM9SF1-204ENST00000525592 TMEM240Q5SV17 173 aa23.09■■□□□ 1.29
TM9SF1-204ENST00000525592 ZNF697Q5TEC3 545 aa23.09■■□□□ 1.29
TM9SF1-204ENST00000525592 C16orf59Q7L2K0 433 aa23.09■■□□□ 1.29
TM9SF1-204ENST00000525592 DHX37Q8IY37 1157 aaKnown RBP23.09■■□□□ 1.29
TM9SF1-204ENST00000525592 CMTR1Q8N1G2 835 aaKnown RBP23.09■■□□□ 1.29
TM9SF1-204ENST00000525592 SMARCC2Q8TAQ2 1214 aa23.09■■□□□ 1.29
TM9SF1-204ENST00000525592 KCNB2Q92953 911 aa23.09■■□□□ 1.29
TM9SF1-204ENST00000525592 UMODL1Q5DID0 1318 aa23.08■■□□□ 1.29
TM9SF1-204ENST00000525592 REC8O95072 547 aa23.08■■□□□ 1.29
TM9SF1-204ENST00000525592 HOXD8P13378 290 aaPredicted RBP23.08■■□□□ 1.29
TM9SF1-204ENST00000525592 RCAN1P53805 252 aa23.08■■□□□ 1.29
TM9SF1-204ENST00000525592 XRRA1Q6P2D8 792 aa23.08■■□□□ 1.29
TM9SF1-204ENST00000525592 SESTD1Q86VW0 696 aa23.08■■□□□ 1.29
TM9SF1-204ENST00000525592 RAB11FIP4Q86YS3 637 aa23.08■■□□□ 1.29
TM9SF1-204ENST00000525592 KATNAL1Q9BW62 490 aa23.08■■□□□ 1.29
TM9SF1-204ENST00000525592 WNT8AQ9H1J5 351 aa23.08■■□□□ 1.29
TM9SF1-204ENST00000525592 MYH7BA7E2Y1 1941 aa23.08■■□□□ 1.28
TM9SF1-204ENST00000525592 MEIS2O14770 477 aa23.07■■□□□ 1.28
TM9SF1-204ENST00000525592 ZBTB43O43298 467 aa23.07■■□□□ 1.28
TM9SF1-204ENST00000525592 UBA1P22314 1058 aaKnown RBP23.07■■□□□ 1.28
TM9SF1-204ENST00000525592 HSPA4P34932 840 aa23.07■■□□□ 1.28
TM9SF1-204ENST00000525592 CELF3Q5SZQ8 465 aaKnown RBP23.07■■□□□ 1.28
TM9SF1-204ENST00000525592 RASIP1Q5U651 963 aa23.07■■□□□ 1.28
TM9SF1-204ENST00000525592 MYSM1Q5VVJ2 828 aa23.07■■□□□ 1.28
TM9SF1-204ENST00000525592 USP17L6PQ6QN14 398 aa23.07■■□□□ 1.28
TM9SF1-204ENST00000525592 KAT2BQ92831 832 aa23.07■■□□□ 1.28
TM9SF1-204ENST00000525592 TCEANC2Q96MN5 208 aa23.07■■□□□ 1.28
TM9SF1-204ENST00000525592 INPP4AQ96PE3 977 aaPredicted RBP23.07■■□□□ 1.28
TM9SF1-204ENST00000525592 MTIF3Q9H2K0 278 aaKnown RBP23.07■■□□□ 1.28
TM9SF1-204ENST00000525592 STXBP5LQ9Y2K9 1186 aa23.07■■□□□ 1.28
TM9SF1-204ENST00000525592 TMEM265A0A087WTH1 108 aa23.06■■□□□ 1.28
TM9SF1-204ENST00000525592 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.06■■□□□ 1.28
TM9SF1-204ENST00000525592 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.06■■□□□ 1.28
TM9SF1-204ENST00000525592 PITPNM1O00562 1244 aa23.06■■□□□ 1.28
TM9SF1-204ENST00000525592 PPFIA4O75335 1185 aa23.06■■□□□ 1.28
TM9SF1-204ENST00000525592 GGPS1O95749 300 aa23.06■■□□□ 1.28
TM9SF1-204ENST00000525592 F2P00734 622 aa23.06■■□□□ 1.28
TM9SF1-204ENST00000525592 CYP2C9P11712 490 aa23.06■■□□□ 1.28
TM9SF1-204ENST00000525592 ICAM3P32942 547 aa23.06■■□□□ 1.28
TM9SF1-204ENST00000525592 CCL23P55773 120 aa23.06■■□□□ 1.28
TM9SF1-204ENST00000525592 MRPS9P82933 396 aaKnown RBP23.06■■□□□ 1.28
TM9SF1-204ENST00000525592 RTN1Q16799 776 aa23.06■■□□□ 1.28
TM9SF1-204ENST00000525592 PCNX4Q63HM2 1172 aa23.06■■□□□ 1.28
TM9SF1-204ENST00000525592 ZNF365Q70YC5 407 aa23.06■■□□□ 1.28
TM9SF1-204ENST00000525592 TEX2Q8IWB9 1127 aa23.06■■□□□ 1.28
TM9SF1-204ENST00000525592 RPUSD2Q8IZ73 545 aaKnown RBP23.06■■□□□ 1.28
TM9SF1-204ENST00000525592 PSTPIP2Q9H939 334 aa23.06■■□□□ 1.28
TM9SF1-204ENST00000525592 PFKMP08237 780 aa23.05■■□□□ 1.28
TM9SF1-204ENST00000525592 ACRP10323 421 aa23.05■■□□□ 1.28
TM9SF1-204ENST00000525592 CCDC82Q8N4S0 544 aa23.05■■□□□ 1.28
TM9SF1-204ENST00000525592 HERVK_113Q902F9 699 aa23.05■■□□□ 1.28
TM9SF1-204ENST00000525592 SPATA33Q96N06 139 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms