RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 TMOD1P28289 359 aa14.57□□□□□ -0.08
CAPN1-202ENST00000524773 ACTN3Q08043 901 aaPredicted RBP14.57□□□□□ -0.08
CAPN1-202ENST00000524773 HLTFQ14527 1009 aaKnown RBP eCLIP14.57□□□□□ -0.08
CAPN1-202ENST00000524773 CEP85LQ5SZL2 805 aa14.57□□□□□ -0.08
CAPN1-202ENST00000524773 TXNRD3Q86VQ6 643 aa14.57□□□□□ -0.08
CAPN1-202ENST00000524773 NSUN4Q96CB9 384 aaKnown RBP14.57□□□□□ -0.08
CAPN1-202ENST00000524773 ALS2CR12Q96Q35 445 aa14.57□□□□□ -0.08
CAPN1-202ENST00000524773 MMTAG2Q9BU76 263 aaKnown RBP14.57□□□□□ -0.08
CAPN1-202ENST00000524773 TCP11L1Q9NUJ3 509 aa14.57□□□□□ -0.08
CAPN1-202ENST00000524773 E7EVH7 732 aa14.56□□□□□ -0.08
CAPN1-202ENST00000524773 ECM2O94769 699 aaPredicted RBP14.56□□□□□ -0.08
CAPN1-202ENST00000524773 KLRC1P26715 233 aa14.56□□□□□ -0.08
CAPN1-202ENST00000524773 DDB1Q16531 1140 aa14.56□□□□□ -0.08
CAPN1-202ENST00000524773 NELFCDQ8IXH7 590 aa14.56□□□□□ -0.08
CAPN1-202ENST00000524773 AP1M1Q9BXS5 423 aa14.56□□□□□ -0.08
CAPN1-202ENST00000524773 MAD2L2Q9UI95 211 aa14.56□□□□□ -0.08
CAPN1-202ENST00000524773 THRAP3Q9Y2W1 955 aaKnown RBP14.56□□□□□ -0.08
CAPN1-202ENST00000524773 PLCH1Q4KWH8 1693 aa14.56□□□□□ -0.08
CAPN1-202ENST00000524773 ITGB4P16144 1822 aa14.56□□□□□ -0.08
CAPN1-202ENST00000524773 ERFEQ4G0M1 354 aa14.56□□□□□ -0.08
CAPN1-202ENST00000524773 USP17L2Q6R6M4 530 aa14.56□□□□□ -0.08
CAPN1-202ENST00000524773 KCNK18Q7Z418 384 aa14.56□□□□□ -0.08
CAPN1-202ENST00000524773 BRIP1Q9BX63 1249 aa14.56□□□□□ -0.08
CAPN1-202ENST00000524773 UBA5Q9GZZ9 404 aa14.56□□□□□ -0.08
CAPN1-202ENST00000524773 TLR2O60603 784 aa14.55□□□□□ -0.08
CAPN1-202ENST00000524773 KIAA0754O94854 1291 aa14.55□□□□□ -0.08
CAPN1-202ENST00000524773 NR1D1P20393 614 aa14.55□□□□□ -0.08
CAPN1-202ENST00000524773 CALML3P27482 149 aa14.55□□□□□ -0.08
CAPN1-202ENST00000524773 NAPAP54920 295 aa14.55□□□□□ -0.08
CAPN1-202ENST00000524773 BAP1Q92560 729 aa14.55□□□□□ -0.08
CAPN1-202ENST00000524773 ERGIC2Q96RQ1 377 aa14.55□□□□□ -0.08
CAPN1-202ENST00000524773 NCAPGQ9BPX3 1015 aa14.55□□□□□ -0.08
CAPN1-202ENST00000524773 TSGA10Q9BZW7 698 aa14.55□□□□□ -0.08
CAPN1-202ENST00000524773 BCORQ6W2J9 1755 aa14.55□□□□□ -0.08
CAPN1-202ENST00000524773 M0R2N6 131 aa14.55□□□□□ -0.08
CAPN1-202ENST00000524773 STXBP3O00186 592 aa14.55□□□□□ -0.08
CAPN1-202ENST00000524773 RAD51CO43502 376 aa14.55□□□□□ -0.08
CAPN1-202ENST00000524773 POLR2FP61218 127 aaKnown RBP14.55□□□□□ -0.08
CAPN1-202ENST00000524773 DIXDC1Q155Q3 683 aa14.55□□□□□ -0.08
CAPN1-202ENST00000524773 ZNF473Q8WTR7 871 aaKnown RBP14.55□□□□□ -0.08
CAPN1-202ENST00000524773 TBC1D5Q92609 795 aa14.55□□□□□ -0.08
CAPN1-202ENST00000524773 ADAMTS1Q9UHI8 967 aa14.55□□□□□ -0.08
CAPN1-202ENST00000524773 PLAAQ9Y263 795 aa14.55□□□□□ -0.08
CAPN1-202ENST00000524773 MYH3P11055 1940 aa14.55□□□□□ -0.08
CAPN1-202ENST00000524773 BICDL2A1A5D9 508 aa14.55□□□□□ -0.08
CAPN1-202ENST00000524773 DCDC2CA8MYV0 355 aa14.55□□□□□ -0.08
CAPN1-202ENST00000524773 OR52Z1P0C646 297 aa14.55□□□□□ -0.08
CAPN1-202ENST00000524773 TCP1P17987 556 aaKnown RBP14.55□□□□□ -0.08
CAPN1-202ENST00000524773 FLT3P36888 993 aa14.55□□□□□ -0.08
CAPN1-202ENST00000524773 KCNMA1Q12791 1236 aa14.55□□□□□ -0.08
CAPN1-202ENST00000524773 CAVIN4Q5BKX8 364 aa14.55□□□□□ -0.08
CAPN1-202ENST00000524773 GPR101Q96P66 508 aaPredicted RBP14.55□□□□□ -0.08
CAPN1-202ENST00000524773 PYM1Q9BRP8 204 aaKnown RBP14.55□□□□□ -0.08
CAPN1-202ENST00000524773 MKNK2Q9HBH9 465 aa14.55□□□□□ -0.08
CAPN1-202ENST00000524773 BCL9O00512 1426 aa14.54□□□□□ -0.08
CAPN1-202ENST00000524773 KIF5BP33176 963 aa14.54□□□□□ -0.08
CAPN1-202ENST00000524773 GRIK5Q16478 980 aa14.54□□□□□ -0.08
CAPN1-202ENST00000524773 EMBQ6PCB8 327 aa14.54□□□□□ -0.08
CAPN1-202ENST00000524773 ZSCAN29Q8IWY8 852 aaPredicted RBP14.54□□□□□ -0.08
CAPN1-202ENST00000524773 SUGP1Q8IWZ8 645 aaKnown RBP14.54□□□□□ -0.08
CAPN1-202ENST00000524773 IQCKQ8N0W5 287 aa14.54□□□□□ -0.08
CAPN1-202ENST00000524773 NOX5Q96PH1 765 aa14.54□□□□□ -0.08
CAPN1-202ENST00000524773 CCT8L2Q96SF2 557 aa14.54□□□□□ -0.08
CAPN1-202ENST00000524773 CCSER1Q9C0I3 900 aa14.54□□□□□ -0.08
CAPN1-202ENST00000524773 ATP6V1AP38606 617 aa14.54□□□□□ -0.08
CAPN1-202ENST00000524773 CRKLP46109 303 aaKnown RBP14.54□□□□□ -0.08
CAPN1-202ENST00000524773 FNTAP49354 379 aa14.54□□□□□ -0.08
CAPN1-202ENST00000524773 HGSNATQ68CP4 663 aa14.54□□□□□ -0.08
CAPN1-202ENST00000524773 FAM133AQ8N9E0 248 aa14.54□□□□□ -0.08
CAPN1-202ENST00000524773 RETREG2Q8NC44 543 aa14.54□□□□□ -0.08
CAPN1-202ENST00000524773 TBCKQ8TEA7 893 aa14.54□□□□□ -0.08
CAPN1-202ENST00000524773 MYCBPQ99417 103 aaPredicted RBP14.54□□□□□ -0.08
CAPN1-202ENST00000524773 MINPP1Q9UNW1 487 aa14.54□□□□□ -0.08
CAPN1-202ENST00000524773 A0A087X0T9 212 aa14.53□□□□□ -0.08
CAPN1-202ENST00000524773 NPHP3-ACAD11A0A0J9YXS1 232 aa14.53□□□□□ -0.08
CAPN1-202ENST00000524773 SMCO2A6NFE2 343 aa14.53□□□□□ -0.08
CAPN1-202ENST00000524773 NTSR2O95665 410 aa14.53□□□□□ -0.08
CAPN1-202ENST00000524773 FAM228BP0C875 321 aa14.53□□□□□ -0.08
CAPN1-202ENST00000524773 RAPGEF1Q13905 1077 aa14.53□□□□□ -0.08
CAPN1-202ENST00000524773 QPCTQ16769 361 aa14.53□□□□□ -0.08
CAPN1-202ENST00000524773 CFAP221Q4G0U5 840 aa14.53□□□□□ -0.08
CAPN1-202ENST00000524773 INTS5Q6P9B9 1019 aaKnown RBP14.53□□□□□ -0.08
CAPN1-202ENST00000524773 TMED8Q6PL24 325 aaPredicted RBP14.53□□□□□ -0.08
CAPN1-202ENST00000524773 ZNF662Q6ZS27 426 aa14.53□□□□□ -0.08
CAPN1-202ENST00000524773 SPATA31A5Q5VU36 1347 aa14.53□□□□□ -0.08
CAPN1-202ENST00000524773 SPATA31A7Q8IWB4 1347 aa14.53□□□□□ -0.08
CAPN1-202ENST00000524773 MEFVO15553 781 aaPredicted RBP14.53□□□□□ -0.08
CAPN1-202ENST00000524773 TDP2O95551 362 aa14.53□□□□□ -0.08
CAPN1-202ENST00000524773 ACTN1P12814 892 aa14.53□□□□□ -0.08
CAPN1-202ENST00000524773 IL6STP40189 918 aaPredicted RBP14.53□□□□□ -0.08
CAPN1-202ENST00000524773 SF3B2Q13435 895 aaKnown RBP14.53□□□□□ -0.08
CAPN1-202ENST00000524773 EP400NLQ6ZTU2 488 aa14.53□□□□□ -0.08
CAPN1-202ENST00000524773 IFT20Q8IY31 132 aa14.53□□□□□ -0.08
CAPN1-202ENST00000524773 LSM14BQ9BX40 385 aaKnown RBP14.53□□□□□ -0.08
CAPN1-202ENST00000524773 CRNKL1Q9BZJ0 848 aaKnown RBP14.53□□□□□ -0.08
CAPN1-202ENST00000524773 NEUROG2Q9H2A3 272 aa14.53□□□□□ -0.08
CAPN1-202ENST00000524773 BLOC1S4Q9NUP1 217 aa14.53□□□□□ -0.08
CAPN1-202ENST00000524773 NUP98P52948 1817 aa14.53□□□□□ -0.08
CAPN1-202ENST00000524773 DOCK2Q92608 1830 aa14.52□□□□□ -0.08
CAPN1-202ENST00000524773 KCNK3O14649 394 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms