RNA–Protein interactions for RNA: ENST00000524478.1

MMP3-203, Transcript of matrix metallopeptidase 3, humanhuman

TSL 4

Gene MMP3, Length 559 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3-203ENST00000524478 NOVP48745 357 aa11.19□□□□□ -0.62
MMP3-203ENST00000524478 PTPN11Q06124 597 aaPredicted RBP11.19□□□□□ -0.62
MMP3-203ENST00000524478 PWP2Q15269 919 aaKnown RBP11.19□□□□□ -0.62
MMP3-203ENST00000524478 PTGISQ16647 500 aa11.19□□□□□ -0.62
MMP3-203ENST00000524478 CCDC96Q2M329 555 aa11.19□□□□□ -0.62
MMP3-203ENST00000524478 LRRFIP1Q32MZ4 808 aaKnown RBP11.19□□□□□ -0.62
MMP3-203ENST00000524478 PTCRAQ6ISU1 281 aaPredicted RBP11.19□□□□□ -0.62
MMP3-203ENST00000524478 RCSD1Q6JBY9 416 aa11.19□□□□□ -0.62
MMP3-203ENST00000524478 CNKSR3Q6P9H4 555 aa11.19□□□□□ -0.62
MMP3-203ENST00000524478 LRRC8DQ7L1W4 858 aa11.19□□□□□ -0.62
MMP3-203ENST00000524478 RETREG2Q8NC44 543 aa11.19□□□□□ -0.62
MMP3-203ENST00000524478 CAGE1Q8TC20 777 aa11.19□□□□□ -0.62
MMP3-203ENST00000524478 SCFD2Q8WU76 684 aa11.19□□□□□ -0.62
MMP3-203ENST00000524478 FBXL18Q96ME1 805 aa11.19□□□□□ -0.62
MMP3-203ENST00000524478 TGS1Q96RS0 853 aaKnown RBP11.19□□□□□ -0.62
MMP3-203ENST00000524478 C17orf80Q9BSJ5 609 aa11.19□□□□□ -0.62
MMP3-203ENST00000524478 ZNF287Q9HBT7 754 aa11.19□□□□□ -0.62
MMP3-203ENST00000524478 INCENPQ9NQS7 918 aa11.19□□□□□ -0.62
MMP3-203ENST00000524478 ECHDC1Q9NTX5 307 aa11.19□□□□□ -0.62
MMP3-203ENST00000524478 MTMR7Q9Y216 660 aa11.19□□□□□ -0.62
MMP3-203ENST00000524478 CACNA1AO00555 2505 aa11.19□□□□□ -0.62
MMP3-203ENST00000524478 GRXCR2A6NFK2 248 aa11.18□□□□□ -0.62
MMP3-203ENST00000524478 H3BQ06 376 aaPredicted RBP11.18□□□□□ -0.62
MMP3-203ENST00000524478 NKRFO15226 690 aaKnown RBP eCLIP11.18□□□□□ -0.62
MMP3-203ENST00000524478 APPP05067 770 aa11.18□□□□□ -0.62
MMP3-203ENST00000524478 MMP3P08254 477 aa11.18□□□□□ -0.62
MMP3-203ENST00000524478 SELPP16109 830 aa11.18□□□□□ -0.62
MMP3-203ENST00000524478 CALML3P27482 149 aa11.18□□□□□ -0.62
MMP3-203ENST00000524478 PDE4AP27815 886 aa11.18□□□□□ -0.62
MMP3-203ENST00000524478 ZP2Q05996 745 aa11.18□□□□□ -0.62
MMP3-203ENST00000524478 PDE4BQ07343 736 aa11.18□□□□□ -0.62
MMP3-203ENST00000524478 ARHGAP1Q07960 439 aa11.18□□□□□ -0.62
MMP3-203ENST00000524478 TRIM71Q2Q1W2 868 aaKnown RBP11.18□□□□□ -0.62
MMP3-203ENST00000524478 SYDE2Q5VT97 1194 aa11.18□□□□□ -0.62
MMP3-203ENST00000524478 FAM117BQ6P1L5 589 aa11.18□□□□□ -0.62
MMP3-203ENST00000524478 BTNL9Q6UXG8 535 aa11.18□□□□□ -0.62
MMP3-203ENST00000524478 SESTD1Q86VW0 696 aa11.18□□□□□ -0.62
MMP3-203ENST00000524478 NEK9Q8TD19 979 aa11.18□□□□□ -0.62
MMP3-203ENST00000524478 BACH2Q9BYV9 841 aa11.18□□□□□ -0.62
MMP3-203ENST00000524478 LRRCC1Q9C099 1032 aa11.18□□□□□ -0.62
MMP3-203ENST00000524478 GPHNQ9NQX3 736 aaPredicted RBP11.18□□□□□ -0.62
MMP3-203ENST00000524478 ADD3Q9UEY8 706 aaKnown RBP11.18□□□□□ -0.62
MMP3-203ENST00000524478 NOD1Q9Y239 953 aa11.18□□□□□ -0.62
MMP3-203ENST00000524478 RBM19Q9Y4C8 960 aaKnown RBP11.18□□□□□ -0.62
MMP3-203ENST00000524478 RIF1Q5UIP0 2472 aaKnown RBP11.17□□□□□ -0.62
MMP3-203ENST00000524478 DMXL1Q9Y485 3027 aa11.17□□□□□ -0.62
MMP3-203ENST00000524478 FRMPD2Q68DX3 1309 aaPredicted RBP11.17□□□□□ -0.62
MMP3-203ENST00000524478 DCXO43602 365 aa11.17□□□□□ -0.62
MMP3-203ENST00000524478 CKBP12277 381 aa11.17□□□□□ -0.62
MMP3-203ENST00000524478 CHMP4BP1P59074 171 aa11.17□□□□□ -0.62
MMP3-203ENST00000524478 RPS6P62753 249 aaKnown RBP11.17□□□□□ -0.62
MMP3-203ENST00000524478 CTDSPL2Q05D32 466 aa11.17□□□□□ -0.62
MMP3-203ENST00000524478 PDE4DQ08499 809 aa11.17□□□□□ -0.62
MMP3-203ENST00000524478 COL19A1Q14993 1142 aa11.17□□□□□ -0.62
MMP3-203ENST00000524478 CCDC62Q6P9F0 684 aa11.17□□□□□ -0.62
MMP3-203ENST00000524478 SKAP1Q86WV1 359 aa11.17□□□□□ -0.62
MMP3-203ENST00000524478 DCAF4Q8WV16 495 aa11.17□□□□□ -0.62
MMP3-203ENST00000524478 AFG1LQ8WV93 481 aa11.17□□□□□ -0.62
MMP3-203ENST00000524478 SNX27Q96L92 541 aa11.17□□□□□ -0.62
MMP3-203ENST00000524478 UIMC1Q96RL1 719 aa11.17□□□□□ -0.62
MMP3-203ENST00000524478 PHOX2BQ99453 314 aa11.17□□□□□ -0.62
MMP3-203ENST00000524478 RAD9AQ99638 391 aa11.17□□□□□ -0.62
MMP3-203ENST00000524478 NAPBQ9H115 298 aa11.17□□□□□ -0.62
MMP3-203ENST00000524478 PATL2C9JE40 543 aaKnown RBP11.16□□□□□ -0.62
MMP3-203ENST00000524478 KPNA6O60684 536 aa11.16□□□□□ -0.62
MMP3-203ENST00000524478 ZFYP08048 801 aaPredicted RBP11.16□□□□□ -0.62
MMP3-203ENST00000524478 TXNP10599 105 aaKnown RBP11.16□□□□□ -0.62
MMP3-203ENST00000524478 HIC1Q14526 733 aa11.16□□□□□ -0.62
MMP3-203ENST00000524478 BRDTQ58F21 947 aaPredicted RBP11.16□□□□□ -0.62
MMP3-203ENST00000524478 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.16□□□□□ -0.62
MMP3-203ENST00000524478 RNF207Q6ZRF8 634 aa11.16□□□□□ -0.62
MMP3-203ENST00000524478 HFE2Q6ZVN8 426 aa11.16□□□□□ -0.62
MMP3-203ENST00000524478 CCDC155Q8N6L0 562 aa11.16□□□□□ -0.62
MMP3-203ENST00000524478 FBXO22Q8NEZ5 403 aa11.16□□□□□ -0.62
MMP3-203ENST00000524478 ZBED2Q9BTP6 218 aa11.16□□□□□ -0.62
MMP3-203ENST00000524478 LNPKQ9C0E8 428 aa11.16□□□□□ -0.62
MMP3-203ENST00000524478 GTF2IRD1Q9UHL9 959 aa11.16□□□□□ -0.62
MMP3-203ENST00000524478 PLXNA3P51805 1871 aa11.15□□□□□ -0.62
MMP3-203ENST00000524478 GVINP1Q7Z2Y8 2422 aa11.15□□□□□ -0.62
MMP3-203ENST00000524478 FAM186AA6NE01 2351 aa11.15□□□□□ -0.62
MMP3-203ENST00000524478 ABHD14A-ACY1A0A1B0GW23 586 aa11.15□□□□□ -0.62
MMP3-203ENST00000524478 POTEB3A0JP26 581 aa11.15□□□□□ -0.62
MMP3-203ENST00000524478 TSPY2A6NKD2 308 aa11.15□□□□□ -0.62
MMP3-203ENST00000524478 ZNF286BP0CG31 522 aa11.15□□□□□ -0.62
MMP3-203ENST00000524478 ALADP13716 330 aa11.15□□□□□ -0.62
MMP3-203ENST00000524478 HTRA4P83105 476 aaPredicted RBP11.15□□□□□ -0.62
MMP3-203ENST00000524478 ZMYM1Q5SVZ6 1142 aa11.15□□□□□ -0.62
MMP3-203ENST00000524478 POTEBQ6S5H4 581 aa11.15□□□□□ -0.62
MMP3-203ENST00000524478 MRPL38Q96DV4 380 aaKnown RBP11.15□□□□□ -0.62
MMP3-203ENST00000524478 COL20A1Q9P218 1284 aa11.15□□□□□ -0.62
MMP3-203ENST00000524478 HDAC6Q9UBN7 1215 aa11.15□□□□□ -0.62
MMP3-203ENST00000524478 WDR19Q8NEZ3 1342 aa11.14□□□□□ -0.63
MMP3-203ENST00000524478 C19orf67A6NJJ6 358 aa11.14□□□□□ -0.63
MMP3-203ENST00000524478 F2P00734 622 aa11.14□□□□□ -0.63
MMP3-203ENST00000524478 PDHBP11177 359 aa11.14□□□□□ -0.63
MMP3-203ENST00000524478 LY6KQ17RY6 165 aa11.14□□□□□ -0.63
MMP3-203ENST00000524478 TIGD5Q53EQ6 642 aa11.14□□□□□ -0.63
MMP3-203ENST00000524478 TCEAL5Q5H9L2 206 aa11.14□□□□□ -0.63
MMP3-203ENST00000524478 ZNF618Q5T7W0 954 aa11.14□□□□□ -0.63
MMP3-203ENST00000524478 VPS53Q5VIR6 699 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms