RNA–Protein interactions for RNA: ENST00000524292.5

CTNNA1-242, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-242ENST00000524292 SMPD1P17405 629 aa9.93□□□□□ -0.82
CTNNA1-242ENST00000524292 ITGB8P26012 769 aa9.93□□□□□ -0.82
CTNNA1-242ENST00000524292 CDK7P50613 346 aa9.93□□□□□ -0.82
CTNNA1-242ENST00000524292 PDE4DQ08499 809 aa9.93□□□□□ -0.82
CTNNA1-242ENST00000524292 TRDNQ13061 729 aa9.93□□□□□ -0.82
CTNNA1-242ENST00000524292 PPIGQ13427 754 aaKnown RBP eCLIP9.93□□□□□ -0.82
CTNNA1-242ENST00000524292 USH1GQ495M9 461 aa9.93□□□□□ -0.82
CTNNA1-242ENST00000524292 BRDTQ58F21 947 aaPredicted RBP9.93□□□□□ -0.82
CTNNA1-242ENST00000524292 TTC22Q5TAA0 569 aa9.93□□□□□ -0.82
CTNNA1-242ENST00000524292 TAPT1Q6NXT6 567 aa9.93□□□□□ -0.82
CTNNA1-242ENST00000524292 CXCL17Q6UXB2 119 aa9.93□□□□□ -0.82
CTNNA1-242ENST00000524292 SLC30A10Q6XR72 485 aa9.93□□□□□ -0.82
CTNNA1-242ENST00000524292 KIAA1211Q6ZU35 1233 aa9.93□□□□□ -0.82
CTNNA1-242ENST00000524292 NYAP1Q6ZVC0 841 aa9.93□□□□□ -0.82
CTNNA1-242ENST00000524292 TMEM199Q8N511 208 aa9.93□□□□□ -0.82
CTNNA1-242ENST00000524292 ENAHQ8N8S7 591 aaPredicted RBP9.93□□□□□ -0.82
CTNNA1-242ENST00000524292 DNERQ8NFT8 737 aa9.93□□□□□ -0.82
CTNNA1-242ENST00000524292 CLEC4DQ8WXI8 215 aa9.93□□□□□ -0.82
CTNNA1-242ENST00000524292 MAF1Q9H063 256 aa9.93□□□□□ -0.82
CTNNA1-242ENST00000524292 TBX21Q9UL17 535 aa9.93□□□□□ -0.82
CTNNA1-242ENST00000524292 ABCB11O95342 1321 aa9.92□□□□□ -0.82
CTNNA1-242ENST00000524292 CTAGE5O15320 804 aa9.92□□□□□ -0.82
CTNNA1-242ENST00000524292 PARP1P09874 1014 aaKnown RBP9.92□□□□□ -0.82
CTNNA1-242ENST00000524292 CPT1AP50416 773 aa9.92□□□□□ -0.82
CTNNA1-242ENST00000524292 RPS6P62753 249 aaKnown RBP9.92□□□□□ -0.82
CTNNA1-242ENST00000524292 ITGA7Q13683 1181 aa9.92□□□□□ -0.82
CTNNA1-242ENST00000524292 PPP2R5BQ15173 497 aa9.92□□□□□ -0.82
CTNNA1-242ENST00000524292 CDC37Q16543 378 aaPredicted RBP9.92□□□□□ -0.82
CTNNA1-242ENST00000524292 DUSP28Q4G0W2 176 aa9.92□□□□□ -0.82
CTNNA1-242ENST00000524292 SWT1Q5T5J6 900 aaKnown RBP9.92□□□□□ -0.82
CTNNA1-242ENST00000524292 IFIT1BQ5T764 474 aaKnown RBP9.92□□□□□ -0.82
CTNNA1-242ENST00000524292 MFSD5Q6N075 450 aa9.92□□□□□ -0.82
CTNNA1-242ENST00000524292 FAM126BQ8IXS8 530 aa9.92□□□□□ -0.82
CTNNA1-242ENST00000524292 ANKS1AQ92625 1134 aa9.92□□□□□ -0.82
CTNNA1-242ENST00000524292 PURBQ96QR8 312 aaKnown RBP9.92□□□□□ -0.82
CTNNA1-242ENST00000524292 WDR11Q9BZH6 1224 aa9.92□□□□□ -0.82
CTNNA1-242ENST00000524292 UBA5Q9GZZ9 404 aa9.92□□□□□ -0.82
CTNNA1-242ENST00000524292 PDGFCQ9NRA1 345 aa9.92□□□□□ -0.82
CTNNA1-242ENST00000524292 POLR3EQ9NVU0 708 aa9.92□□□□□ -0.82
CTNNA1-242ENST00000524292 ZSWIM5Q9P217 1185 aa9.92□□□□□ -0.82
CTNNA1-242ENST00000524292 DDX49Q9Y6V7 483 aaKnown RBP9.92□□□□□ -0.82
CTNNA1-242ENST00000524292 RCCD1A6NED2 376 aa9.91□□□□□ -0.82
CTNNA1-242ENST00000524292 NKRFO15226 690 aaKnown RBP eCLIP9.91□□□□□ -0.82
CTNNA1-242ENST00000524292 RNF40O75150 1001 aa9.91□□□□□ -0.82
CTNNA1-242ENST00000524292 PSRC1Q6PGN9 363 aaPredicted RBP9.91□□□□□ -0.82
CTNNA1-242ENST00000524292 METTL3Q86U44 580 aaKnown RBP9.91□□□□□ -0.82
CTNNA1-242ENST00000524292 MCF2L2Q86YR7 1114 aa9.91□□□□□ -0.82
CTNNA1-242ENST00000524292 ADGRF4Q8IZF3 695 aa9.91□□□□□ -0.82
CTNNA1-242ENST00000524292 RGS22Q8NE09 1264 aa9.91□□□□□ -0.82
CTNNA1-242ENST00000524292 OR6J1Q8NGC5 347 aa9.91□□□□□ -0.82
CTNNA1-242ENST00000524292 SCFD2Q8WU76 684 aa9.91□□□□□ -0.82
CTNNA1-242ENST00000524292 FAM161BQ96MY7 647 aa9.91□□□□□ -0.82
CTNNA1-242ENST00000524292 PPP1R12CQ9BZL4 782 aa9.91□□□□□ -0.82
CTNNA1-242ENST00000524292 HIPK3Q9H422 1215 aa9.91□□□□□ -0.82
CTNNA1-242ENST00000524292 A0A0C4DFX4 3053 aa9.91□□□□□ -0.82
CTNNA1-242ENST00000524292 LCTP09848 1927 aa9.9□□□□□ -0.82
CTNNA1-242ENST00000524292 TMEM265A0A087WTH1 108 aa9.9□□□□□ -0.82
CTNNA1-242ENST00000524292 RBM47A0AV96 593 aaKnown RBP9.9□□□□□ -0.82
CTNNA1-242ENST00000524292 ERICH2A1L162 156 aa9.9□□□□□ -0.82
CTNNA1-242ENST00000524292 CD4P01730 458 aa9.9□□□□□ -0.82
CTNNA1-242ENST00000524292 GSPT1P15170 499 aaKnown RBP9.9□□□□□ -0.82
CTNNA1-242ENST00000524292 EDNRBP24530 442 aa9.9□□□□□ -0.82
CTNNA1-242ENST00000524292 EPHB4P54760 987 aa9.9□□□□□ -0.82
CTNNA1-242ENST00000524292 SART3Q15020 963 aaKnown RBP9.9□□□□□ -0.82
CTNNA1-242ENST00000524292 RALYLQ86SE5 291 aaKnown RBP9.9□□□□□ -0.82
CTNNA1-242ENST00000524292 FBXO11Q86XK2 927 aa9.9□□□□□ -0.82
CTNNA1-242ENST00000524292 SLC43A3Q8NBI5 491 aa9.9□□□□□ -0.82
CTNNA1-242ENST00000524292 GUCD1Q96NT3 240 aa9.9□□□□□ -0.82
CTNNA1-242ENST00000524292 MTIF3Q9H2K0 278 aaKnown RBP9.9□□□□□ -0.82
CTNNA1-242ENST00000524292 CPVLQ9H3G5 476 aa9.9□□□□□ -0.82
CTNNA1-242ENST00000524292 TMEM134Q9H6X4 195 aa9.9□□□□□ -0.82
CTNNA1-242ENST00000524292 MRPL11Q9Y3B7 192 aaKnown RBP9.9□□□□□ -0.82
CTNNA1-242ENST00000524292 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.89□□□□□ -0.83
CTNNA1-242ENST00000524292 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.89□□□□□ -0.83
CTNNA1-242ENST00000524292 KPNA6O60684 536 aa9.89□□□□□ -0.83
CTNNA1-242ENST00000524292 MYL3P08590 195 aa9.89□□□□□ -0.83
CTNNA1-242ENST00000524292 SUPT20HL2P0C7V6 817 aa9.89□□□□□ -0.83
CTNNA1-242ENST00000524292 CSF2RAP15509 400 aa9.89□□□□□ -0.83
CTNNA1-242ENST00000524292 PTGS1P23219 599 aa9.89□□□□□ -0.83
CTNNA1-242ENST00000524292 CHMLP26374 656 aa9.89□□□□□ -0.83
CTNNA1-242ENST00000524292 CYP2C18P33260 490 aa9.89□□□□□ -0.83
CTNNA1-242ENST00000524292 PSMC6P62333 389 aa9.89□□□□□ -0.83
CTNNA1-242ENST00000524292 IRX6P78412 446 aaPredicted RBP9.89□□□□□ -0.83
CTNNA1-242ENST00000524292 TRAF1Q13077 416 aa9.89□□□□□ -0.83
CTNNA1-242ENST00000524292 TTLL4Q14679 1199 aa9.89□□□□□ -0.83
CTNNA1-242ENST00000524292 QRICH1Q2TAL8 776 aa9.89□□□□□ -0.83
CTNNA1-242ENST00000524292 NSUN6Q8TEA1 469 aaKnown RBP9.89□□□□□ -0.83
CTNNA1-242ENST00000524292 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.89□□□□□ -0.83
CTNNA1-242ENST00000524292 MTG1Q9BT17 334 aaPredicted RBP9.89□□□□□ -0.83
CTNNA1-242ENST00000524292 SEMA6BQ9H3T3 888 aa9.89□□□□□ -0.83
CTNNA1-242ENST00000524292 VAT1LQ9HCJ6 419 aa9.89□□□□□ -0.83
CTNNA1-242ENST00000524292 KLRF2D3W0D1 207 aa9.88□□□□□ -0.83
CTNNA1-242ENST00000524292 IFIT3O14879 490 aaKnown RBP9.88□□□□□ -0.83
CTNNA1-242ENST00000524292 B4GALT4O60513 344 aa9.88□□□□□ -0.83
CTNNA1-242ENST00000524292 TXNP10599 105 aaKnown RBP9.88□□□□□ -0.83
CTNNA1-242ENST00000524292 PURAQ00577 322 aaKnown RBP9.88□□□□□ -0.83
CTNNA1-242ENST00000524292 STXBP2Q15833 593 aa9.88□□□□□ -0.83
CTNNA1-242ENST00000524292 FAM47CQ5HY64 1035 aa9.88□□□□□ -0.83
CTNNA1-242ENST00000524292 TMEM240Q5SV17 173 aa9.88□□□□□ -0.83
CTNNA1-242ENST00000524292 ARHGEF16Q5VV41 709 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms