RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 DDX41Q9UJV9 622 aaKnown RBP13.75□□□□□ -0.21
CLN8-207ENST00000524258 SMCO2A6NFE2 343 aa13.74□□□□□ -0.21
CLN8-207ENST00000524258 DYNC1LI2O43237 492 aaPredicted RBP13.74□□□□□ -0.21
CLN8-207ENST00000524258 FDPSP14324 419 aaKnown RBP13.74□□□□□ -0.21
CLN8-207ENST00000524258 ACLYP53396 1101 aa13.74□□□□□ -0.21
CLN8-207ENST00000524258 BEX3Q00994 111 aa13.74□□□□□ -0.21
CLN8-207ENST00000524258 SP2Q02086 613 aa13.74□□□□□ -0.21
CLN8-207ENST00000524258 PCNX4Q63HM2 1172 aa13.74□□□□□ -0.21
CLN8-207ENST00000524258 RNF180Q86T96 592 aa13.74□□□□□ -0.21
CLN8-207ENST00000524258 TLK2Q86UE8 772 aa13.74□□□□□ -0.21
CLN8-207ENST00000524258 NECAB1Q8N987 351 aa13.74□□□□□ -0.21
CLN8-207ENST00000524258 SMARCC2Q8TAQ2 1214 aa13.74□□□□□ -0.21
CLN8-207ENST00000524258 GTF3C6Q969F1 213 aa13.74□□□□□ -0.21
CLN8-207ENST00000524258 SENP6Q9GZR1 1112 aaPredicted RBP13.74□□□□□ -0.21
CLN8-207ENST00000524258 SLKQ9H2G2 1235 aaPredicted RBP13.74□□□□□ -0.21
CLN8-207ENST00000524258 BCAS3Q9H6U6 928 aa13.74□□□□□ -0.21
CLN8-207ENST00000524258 PCDHA6Q9UN73 950 aa13.74□□□□□ -0.21
CLN8-207ENST00000524258 PCDHA8Q9Y5H6 950 aa13.74□□□□□ -0.21
CLN8-207ENST00000524258 ALPK3Q96L96 1907 aa13.74□□□□□ -0.21
CLN8-207ENST00000524258 A0A1W2PQ45 241 aaPredicted RBP13.73□□□□□ -0.21
CLN8-207ENST00000524258 A0A1W2PQY0 241 aa13.73□□□□□ -0.21
CLN8-207ENST00000524258 A6NJR5 290 aa13.73□□□□□ -0.21
CLN8-207ENST00000524258 KBTBD13C9JR72 458 aa13.73□□□□□ -0.21
CLN8-207ENST00000524258 NKRFO15226 690 aaKnown RBP eCLIP13.73□□□□□ -0.21
CLN8-207ENST00000524258 TXNP10599 105 aaKnown RBP13.73□□□□□ -0.21
CLN8-207ENST00000524258 MYCLP12524 364 aaPredicted RBP13.73□□□□□ -0.21
CLN8-207ENST00000524258 CCND2P30279 289 aa13.73□□□□□ -0.21
CLN8-207ENST00000524258 ICAM3P32942 547 aa13.73□□□□□ -0.21
CLN8-207ENST00000524258 ARHGAP1Q07960 439 aa13.73□□□□□ -0.21
CLN8-207ENST00000524258 SSRP1Q08945 709 aaKnown RBP13.73□□□□□ -0.21
CLN8-207ENST00000524258 LY6KQ17RY6 165 aa13.73□□□□□ -0.21
CLN8-207ENST00000524258 C1orf53Q5VUE5 145 aa13.73□□□□□ -0.21
CLN8-207ENST00000524258 XRRA1Q6P2D8 792 aa13.73□□□□□ -0.21
CLN8-207ENST00000524258 SLC39A5Q6ZMH5 540 aa13.73□□□□□ -0.21
CLN8-207ENST00000524258 SEPT14Q6ZU15 432 aa13.73□□□□□ -0.21
CLN8-207ENST00000524258 CUL5Q93034 780 aa13.73□□□□□ -0.21
CLN8-207ENST00000524258 MPHOSPH6Q99547 160 aaKnown RBP13.73□□□□□ -0.21
CLN8-207ENST00000524258 SH3GLB2Q9NR46 395 aa13.73□□□□□ -0.21
CLN8-207ENST00000524258 TMEM260Q9NX78 707 aa13.73□□□□□ -0.21
CLN8-207ENST00000524258 RANBP2P49792 3224 aaKnown RBP13.73□□□□□ -0.21
CLN8-207ENST00000524258 GRIN2DO15399 1336 aa13.72□□□□□ -0.21
CLN8-207ENST00000524258 STK36Q9NRP7 1315 aa13.72□□□□□ -0.21
CLN8-207ENST00000524258 MOXD2PA6NHM9 499 aa13.72□□□□□ -0.21
CLN8-207ENST00000524258 SPATA31C2B4DYI2 1134 aa13.72□□□□□ -0.21
CLN8-207ENST00000524258 M0R2N6 131 aa13.72□□□□□ -0.21
CLN8-207ENST00000524258 CD2BP2O95400 341 aaKnown RBP13.72□□□□□ -0.21
CLN8-207ENST00000524258 ASGR1P07306 291 aa13.72□□□□□ -0.21
CLN8-207ENST00000524258 C6orf222P0C671 652 aaPredicted RBP13.72□□□□□ -0.21
CLN8-207ENST00000524258 ITGB5P18084 799 aa13.72□□□□□ -0.21
CLN8-207ENST00000524258 CDK7P50613 346 aa13.72□□□□□ -0.21
CLN8-207ENST00000524258 ADCY7P51828 1080 aa13.72□□□□□ -0.21
CLN8-207ENST00000524258 TTLL4Q14679 1199 aa13.72□□□□□ -0.21
CLN8-207ENST00000524258 FSCN1Q16658 493 aaKnown RBP13.72□□□□□ -0.21
CLN8-207ENST00000524258 GNASQ5JWF2 1037 aa13.72□□□□□ -0.21
CLN8-207ENST00000524258 SLC43A3Q8NBI5 491 aa13.72□□□□□ -0.21
CLN8-207ENST00000524258 NSUN7Q8NE18 718 aaKnown RBP13.72□□□□□ -0.21
CLN8-207ENST00000524258 EMID1Q96A84 441 aaPredicted RBP13.72□□□□□ -0.21
CLN8-207ENST00000524258 FERMT2Q96AC1 680 aa13.72□□□□□ -0.21
CLN8-207ENST00000524258 PGBD1Q96JS3 809 aa13.72□□□□□ -0.21
CLN8-207ENST00000524258 HTATIP2Q9BUP3 242 aa13.72□□□□□ -0.21
CLN8-207ENST00000524258 VPS54Q9P1Q0 977 aa13.72□□□□□ -0.21
CLN8-207ENST00000524258 LIMCH1Q9UPQ0 1083 aa13.72□□□□□ -0.21
CLN8-207ENST00000524258 UBIAD1Q9Y5Z9 338 aa13.72□□□□□ -0.21
CLN8-207ENST00000524258 STAM2O75886 525 aa13.71□□□□□ -0.21
CLN8-207ENST00000524258 DEXIO95424 95 aa13.71□□□□□ -0.21
CLN8-207ENST00000524258 FOSP01100 380 aaPredicted RBP13.71□□□□□ -0.21
CLN8-207ENST00000524258 TGFB3P10600 412 aa13.71□□□□□ -0.21
CLN8-207ENST00000524258 HOXD8P13378 290 aaPredicted RBP13.71□□□□□ -0.21
CLN8-207ENST00000524258 SREBF1P36956 1147 aa13.71□□□□□ -0.21
CLN8-207ENST00000524258 RABEP1Q15276 862 aa13.71□□□□□ -0.21
CLN8-207ENST00000524258 NOL8Q76FK4 1167 aaKnown RBP13.71□□□□□ -0.21
CLN8-207ENST00000524258 ANO3Q9BYT9 981 aa13.71□□□□□ -0.21
CLN8-207ENST00000524258 GLT8D2Q9H1C3 349 aa13.71□□□□□ -0.21
CLN8-207ENST00000524258 RTEL1Q9NZ71 1219 aa13.71□□□□□ -0.21
CLN8-207ENST00000524258 KIAA1217Q5T5P2 1943 aa13.7□□□□□ -0.22
CLN8-207ENST00000524258 ELP1O95163 1332 aa13.7□□□□□ -0.22
CLN8-207ENST00000524258 CPLX1O14810 134 aa13.7□□□□□ -0.22
CLN8-207ENST00000524258 JAK2O60674 1132 aa13.7□□□□□ -0.22
CLN8-207ENST00000524258 MYCNP04198 464 aaPredicted RBP13.7□□□□□ -0.22
CLN8-207ENST00000524258 UBA1P22314 1058 aaKnown RBP13.7□□□□□ -0.22
CLN8-207ENST00000524258 ATN1P54259 1190 aaPredicted RBP13.7□□□□□ -0.22
CLN8-207ENST00000524258 AP3B2Q13367 1082 aa13.7□□□□□ -0.22
CLN8-207ENST00000524258 CELF3Q5SZQ8 465 aaKnown RBP13.7□□□□□ -0.22
CLN8-207ENST00000524258 MYSM1Q5VVJ2 828 aa13.7□□□□□ -0.22
CLN8-207ENST00000524258 CXCL17Q6UXB2 119 aa13.7□□□□□ -0.22
CLN8-207ENST00000524258 TRIM22Q8IYM9 498 aa13.7□□□□□ -0.22
CLN8-207ENST00000524258 FAM177A1Q8N128 213 aaPredicted RBP13.7□□□□□ -0.22
CLN8-207ENST00000524258 PCSK9Q8NBP7 692 aaKnown RBP13.7□□□□□ -0.22
CLN8-207ENST00000524258 OR6J1Q8NGC5 347 aa13.7□□□□□ -0.22
CLN8-207ENST00000524258 CYP2W1Q8TAV3 490 aa13.7□□□□□ -0.22
CLN8-207ENST00000524258 RASGRP4Q8TDF6 673 aa13.7□□□□□ -0.22
CLN8-207ENST00000524258 AP5M1Q9H0R1 490 aa13.7□□□□□ -0.22
CLN8-207ENST00000524258 SPC25Q9HBM1 224 aa13.7□□□□□ -0.22
CLN8-207ENST00000524258 GJB4Q9NTQ9 266 aa13.7□□□□□ -0.22
CLN8-207ENST00000524258 TELO2Q9Y4R8 837 aa13.7□□□□□ -0.22
CLN8-207ENST00000524258 H0YGN5 161 aa13.69□□□□□ -0.22
CLN8-207ENST00000524258 ATP9AO75110 1047 aa13.69□□□□□ -0.22
CLN8-207ENST00000524258 GH1P01241 217 aa13.69□□□□□ -0.22
CLN8-207ENST00000524258 CYP3A4P08684 503 aa13.69□□□□□ -0.22
CLN8-207ENST00000524258 RTP1P59025 263 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms