RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 ARID5BQ14865 1188 aa14.39□□□□□ -0.11
PCDHGB1-201ENST00000523390 SBK1Q52WX2 424 aa14.39□□□□□ -0.11
PCDHGB1-201ENST00000523390 C3orf67Q6ZVT6 689 aa14.39□□□□□ -0.11
PCDHGB1-201ENST00000523390 GOLGA5Q8TBA6 731 aa14.39□□□□□ -0.11
PCDHGB1-201ENST00000523390 CCDC114Q96M63 670 aa14.39□□□□□ -0.11
PCDHGB1-201ENST00000523390 NACC1Q96RE7 527 aa14.39□□□□□ -0.11
PCDHGB1-201ENST00000523390 WRNIP1Q96S55 665 aa14.39□□□□□ -0.11
PCDHGB1-201ENST00000523390 FERMT1Q9BQL6 677 aa14.39□□□□□ -0.11
PCDHGB1-201ENST00000523390 SPP2Q13103 211 aa14.39□□□□□ -0.11
PCDHGB1-201ENST00000523390 EXOC3L4Q17RC7 722 aa14.39□□□□□ -0.11
PCDHGB1-201ENST00000523390 PEX26Q7Z412 305 aa14.39□□□□□ -0.11
PCDHGB1-201ENST00000523390 IQCDQ96DY2 449 aa14.39□□□□□ -0.11
PCDHGB1-201ENST00000523390 SLC4A9Q96Q91 983 aa14.39□□□□□ -0.11
PCDHGB1-201ENST00000523390 PLEKHA4Q9H4M7 779 aa14.39□□□□□ -0.11
PCDHGB1-201ENST00000523390 ZNF215Q9UL58 517 aaPredicted RBP14.39□□□□□ -0.11
PCDHGB1-201ENST00000523390 PRR29P0C7W0 189 aa14.38□□□□□ -0.11
PCDHGB1-201ENST00000523390 RPS6KA1Q15418 735 aa14.38□□□□□ -0.11
PCDHGB1-201ENST00000523390 APBB1IPQ7Z5R6 666 aaPredicted RBP14.38□□□□□ -0.11
PCDHGB1-201ENST00000523390 KLHL7Q8IXQ5 586 aa14.38□□□□□ -0.11
PCDHGB1-201ENST00000523390 ZNF579Q8NAF0 562 aaKnown RBP14.38□□□□□ -0.11
PCDHGB1-201ENST00000523390 BBXQ8WY36 941 aaPredicted RBP14.38□□□□□ -0.11
PCDHGB1-201ENST00000523390 ATP6V0A1Q93050 837 aa14.38□□□□□ -0.11
PCDHGB1-201ENST00000523390 USTQ9Y2C2 406 aa14.38□□□□□ -0.11
PCDHGB1-201ENST00000523390 HNRNPDLO14979 420 aaKnown RBP14.38□□□□□ -0.11
PCDHGB1-201ENST00000523390 TDP2O95551 362 aa14.38□□□□□ -0.11
PCDHGB1-201ENST00000523390 TUBBP07437 444 aa14.38□□□□□ -0.11
PCDHGB1-201ENST00000523390 POTEDQ86YR6 584 aa14.38□□□□□ -0.11
PCDHGB1-201ENST00000523390 POMGNT1Q8WZA1 660 aa14.38□□□□□ -0.11
PCDHGB1-201ENST00000523390 EMILIN3Q9NT22 766 aa14.38□□□□□ -0.11
PCDHGB1-201ENST00000523390 SUGT1Q9Y2Z0 365 aa14.38□□□□□ -0.11
PCDHGB1-201ENST00000523390 ZHX2Q9Y6X8 837 aa14.38□□□□□ -0.11
PCDHGB1-201ENST00000523390 GOLGA6L7A0A1B0GV03 622 aa14.38□□□□□ -0.11
PCDHGB1-201ENST00000523390 BUB1O43683 1085 aa14.38□□□□□ -0.11
PCDHGB1-201ENST00000523390 MYL1P05976 194 aa14.38□□□□□ -0.11
PCDHGB1-201ENST00000523390 CDC25BP30305 580 aa14.38□□□□□ -0.11
PCDHGB1-201ENST00000523390 CA8P35219 290 aa14.38□□□□□ -0.11
PCDHGB1-201ENST00000523390 MKRN3Q13064 507 aaKnown RBP14.38□□□□□ -0.11
PCDHGB1-201ENST00000523390 STRIP1Q5VSL9 837 aa14.38□□□□□ -0.11
PCDHGB1-201ENST00000523390 MTMR4Q9NYA4 1195 aa14.38□□□□□ -0.11
PCDHGB1-201ENST00000523390 RWDD2AQ9UIY3 292 aa14.38□□□□□ -0.11
PCDHGB1-201ENST00000523390 ARHGAP4P98171 946 aa14.37□□□□□ -0.11
PCDHGB1-201ENST00000523390 CDC42EP5Q6NZY7 148 aa14.37□□□□□ -0.11
PCDHGB1-201ENST00000523390 ZBTB8OSQ8IWT0 167 aa14.37□□□□□ -0.11
PCDHGB1-201ENST00000523390 PIGOQ8TEQ8 1089 aa14.37□□□□□ -0.11
PCDHGB1-201ENST00000523390 CEP170P1Q96L14 293 aa14.37□□□□□ -0.11
PCDHGB1-201ENST00000523390 ANKFY1Q9P2R3 1169 aa14.37□□□□□ -0.11
PCDHGB1-201ENST00000523390 KCNG1Q9UIX4 513 aa14.37□□□□□ -0.11
PCDHGB1-201ENST00000523390 IKBKGQ9Y6K9 419 aa14.37□□□□□ -0.11
PCDHGB1-201ENST00000523390 RASA1P20936 1047 aa14.37□□□□□ -0.11
PCDHGB1-201ENST00000523390 FGFR2P21802 821 aa14.37□□□□□ -0.11
PCDHGB1-201ENST00000523390 LIN9Q5TKA1 542 aa14.37□□□□□ -0.11
PCDHGB1-201ENST00000523390 KIAA1524Q8TCG1 905 aa14.37□□□□□ -0.11
PCDHGB1-201ENST00000523390 RAVER2Q9HCJ3 691 aaKnown RBP14.37□□□□□ -0.11
PCDHGB1-201ENST00000523390 RIC8AQ9NPQ8 531 aa14.37□□□□□ -0.11
PCDHGB1-201ENST00000523390 SFI1A8K8P3 1242 aa14.37□□□□□ -0.11
PCDHGB1-201ENST00000523390 CALCOCO2Q13137 446 aa14.37□□□□□ -0.11
PCDHGB1-201ENST00000523390 AP3B2Q13367 1082 aa14.37□□□□□ -0.11
PCDHGB1-201ENST00000523390 MAN2A1Q16706 1144 aa14.37□□□□□ -0.11
PCDHGB1-201ENST00000523390 ERCC6LQ2NKX8 1250 aa14.37□□□□□ -0.11
PCDHGB1-201ENST00000523390 CFAP58Q5T655 872 aa14.37□□□□□ -0.11
PCDHGB1-201ENST00000523390 RNF187Q5TA31 235 aaPredicted RBP14.37□□□□□ -0.11
PCDHGB1-201ENST00000523390 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.37□□□□□ -0.11
PCDHGB1-201ENST00000523390 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.37□□□□□ -0.11
PCDHGB1-201ENST00000523390 SAR1BQ9Y6B6 198 aa14.37□□□□□ -0.11
PCDHGB1-201ENST00000523390 ZRSR2Q15696 482 aaKnown RBP14.37□□□□□ -0.11
PCDHGB1-201ENST00000523390 SLC10A5Q5PT55 438 aa14.37□□□□□ -0.11
PCDHGB1-201ENST00000523390 DCUN1D2Q6PH85 259 aa14.37□□□□□ -0.11
PCDHGB1-201ENST00000523390 PCIF1Q9H4Z3 704 aa14.37□□□□□ -0.11
PCDHGB1-201ENST00000523390 SCAF8Q9UPN6 1271 aaKnown RBP14.37□□□□□ -0.11
PCDHGB1-201ENST00000523390 OPA1O60313 960 aa14.36□□□□□ -0.11
PCDHGB1-201ENST00000523390 EZRP15311 586 aaKnown RBP14.36□□□□□ -0.11
PCDHGB1-201ENST00000523390 TUBB2AQ13885 445 aa14.36□□□□□ -0.11
PCDHGB1-201ENST00000523390 VSTM4Q8IW00 320 aa14.36□□□□□ -0.11
PCDHGB1-201ENST00000523390 FAM186BQ8IYM0 893 aa14.36□□□□□ -0.11
PCDHGB1-201ENST00000523390 TUBB2BQ9BVA1 445 aa14.36□□□□□ -0.11
PCDHGB1-201ENST00000523390 HAUS4Q9H6D7 363 aa14.36□□□□□ -0.11
PCDHGB1-201ENST00000523390 TRIM49BA6NDI0 452 aa14.36□□□□□ -0.11
PCDHGB1-201ENST00000523390 ZNF354CQ86Y25 554 aa14.36□□□□□ -0.11
PCDHGB1-201ENST00000523390 CCDC26Q8TAB7 109 aa14.36□□□□□ -0.11
PCDHGB1-201ENST00000523390 DDX12PQ92771 950 aa14.36□□□□□ -0.11
PCDHGB1-201ENST00000523390 VPS18Q9P253 973 aa14.36□□□□□ -0.11
PCDHGB1-201ENST00000523390 HPS5Q9UPZ3 1129 aa14.36□□□□□ -0.11
PCDHGB1-201ENST00000523390 TNS2Q63HR2 1409 aa14.36□□□□□ -0.11
PCDHGB1-201ENST00000523390 PRPF6O94906 941 aaKnown RBP14.36□□□□□ -0.11
PCDHGB1-201ENST00000523390 KRT31Q15323 416 aa14.36□□□□□ -0.11
PCDHGB1-201ENST00000523390 NRBP2Q9NSY0 501 aa14.36□□□□□ -0.11
PCDHGB1-201ENST00000523390 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.36□□□□□ -0.11
PCDHGB1-201ENST00000523390 E9PMD0 336 aa14.36□□□□□ -0.11
PCDHGB1-201ENST00000523390 GAP43P17677 238 aa14.36□□□□□ -0.11
PCDHGB1-201ENST00000523390 FAM47CQ5HY64 1035 aa14.36□□□□□ -0.11
PCDHGB1-201ENST00000523390 SLC7A3Q8WY07 619 aa14.36□□□□□ -0.11
PCDHGB1-201ENST00000523390 MTRF1LQ9UGC7 380 aaKnown RBP14.36□□□□□ -0.11
PCDHGB1-201ENST00000523390 RNF207Q6ZRF8 634 aa14.35□□□□□ -0.11
PCDHGB1-201ENST00000523390 DPP9Q86TI2 863 aa14.35□□□□□ -0.11
PCDHGB1-201ENST00000523390 UBL4BQ8N7F7 174 aa14.35□□□□□ -0.11
PCDHGB1-201ENST00000523390 ZNF526Q8TF50 670 aaPredicted RBP14.35□□□□□ -0.11
PCDHGB1-201ENST00000523390 PPP1R13BQ96KQ4 1090 aa14.35□□□□□ -0.11
PCDHGB1-201ENST00000523390 GDAP1L1Q96MZ0 367 aa14.35□□□□□ -0.11
PCDHGB1-201ENST00000523390 UBE2Q2LH0YL09 131 aa14.35□□□□□ -0.11
PCDHGB1-201ENST00000523390 COL23A1Q86Y22 540 aaPredicted RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms