RNA–Protein interactions for RNA: ENST00000523308.5

DENND3-221, Transcript of DENN domain containing 3, humanhuman

TSL 2 BASIC

Gene DENND3, Length 2,959 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-221ENST00000523308 SMIM5Q71RC9 77 aa13.8□□□□□ -0.2
DENND3-221ENST00000523308 TRMT44Q8IYL2 757 aaKnown RBP13.8□□□□□ -0.2
DENND3-221ENST00000523308 IGDCC4Q8TDY8 1250 aa13.8□□□□□ -0.2
DENND3-221ENST00000523308 OXCT2Q9BYC2 517 aaPredicted RBP13.8□□□□□ -0.2
DENND3-221ENST00000523308 ZCWPW1Q9H0M4 648 aa13.8□□□□□ -0.2
DENND3-221ENST00000523308 VCX3BQ9H321 246 aa13.8□□□□□ -0.2
DENND3-221ENST00000523308 LY9Q9HBG7 655 aa13.8□□□□□ -0.2
DENND3-221ENST00000523308 ZNF335Q9H4Z2 1342 aaPredicted RBP13.79□□□□□ -0.2
DENND3-221ENST00000523308 MYH7P12883 1935 aa13.79□□□□□ -0.2
DENND3-221ENST00000523308 MINDY4BA8MYZ0 360 aa13.79□□□□□ -0.2
DENND3-221ENST00000523308 GFPT2O94808 682 aa13.79□□□□□ -0.2
DENND3-221ENST00000523308 IFNL3Q8IZI9 196 aa13.79□□□□□ -0.2
DENND3-221ENST00000523308 LCORLQ8N3X6 602 aa13.79□□□□□ -0.2
DENND3-221ENST00000523308 ASIC4Q96FT7 647 aa13.79□□□□□ -0.2
DENND3-221ENST00000523308 ACAD8Q9UKU7 415 aa13.79□□□□□ -0.2
DENND3-221ENST00000523308 SLC12A7Q9Y666 1083 aa13.79□□□□□ -0.2
DENND3-221ENST00000523308 TBX4P57082 545 aa13.79□□□□□ -0.2
DENND3-221ENST00000523308 SMC1AQ14683 1233 aaKnown RBP13.79□□□□□ -0.2
DENND3-221ENST00000523308 NT5DC4Q86YG4 428 aa13.79□□□□□ -0.2
DENND3-221ENST00000523308 HOMER1Q86YM7 354 aa13.79□□□□□ -0.2
DENND3-221ENST00000523308 SDR42E1Q8WUS8 393 aa13.79□□□□□ -0.2
DENND3-221ENST00000523308 HSD3B7Q9H2F3 369 aa13.79□□□□□ -0.2
DENND3-221ENST00000523308 FANCLQ9NW38 375 aa13.79□□□□□ -0.2
DENND3-221ENST00000523308 FAM205CA6NFA0 338 aa13.78□□□□□ -0.2
DENND3-221ENST00000523308 CYP19A1P11511 503 aaPredicted RBP13.78□□□□□ -0.2
DENND3-221ENST00000523308 TRIM28Q13263 835 aaKnown RBP13.78□□□□□ -0.2
DENND3-221ENST00000523308 PTPAQ15257 358 aa13.78□□□□□ -0.2
DENND3-221ENST00000523308 USP49Q70CQ1 688 aa13.78□□□□□ -0.2
DENND3-221ENST00000523308 METTL16Q86W50 562 aaKnown RBP13.78□□□□□ -0.2
DENND3-221ENST00000523308 SPATA5Q8NB90 893 aa13.78□□□□□ -0.2
DENND3-221ENST00000523308 ANKRD49Q8WVL7 239 aa13.78□□□□□ -0.2
DENND3-221ENST00000523308 TANGO6Q9C0B7 1094 aa13.78□□□□□ -0.2
DENND3-221ENST00000523308 PAIP2BQ9ULR5 123 aaKnown RBP13.78□□□□□ -0.2
DENND3-221ENST00000523308 PCDHA5Q9Y5H7 936 aa13.78□□□□□ -0.2
DENND3-221ENST00000523308 CYP2D7A0A087X1C5 515 aa13.78□□□□□ -0.2
DENND3-221ENST00000523308 H0Y3Z8 333 aa13.78□□□□□ -0.2
DENND3-221ENST00000523308 COBLO75128 1261 aa13.78□□□□□ -0.2
DENND3-221ENST00000523308 HSPA8P11142 646 aaKnown RBP13.78□□□□□ -0.2
DENND3-221ENST00000523308 FERP16591 822 aa13.78□□□□□ -0.2
DENND3-221ENST00000523308 CASP1P29466 404 aa13.78□□□□□ -0.2
DENND3-221ENST00000523308 UBASH3AP57075 661 aa13.78□□□□□ -0.2
DENND3-221ENST00000523308 POLR2FP61218 127 aaKnown RBP13.78□□□□□ -0.2
DENND3-221ENST00000523308 NTRK3Q16288 839 aa13.78□□□□□ -0.2
DENND3-221ENST00000523308 GBP7Q8N8V2 638 aaPredicted RBP13.78□□□□□ -0.2
DENND3-221ENST00000523308 CNNM3Q8NE01 707 aa13.78□□□□□ -0.2
DENND3-221ENST00000523308 OXER1Q8TDS5 423 aa13.78□□□□□ -0.2
DENND3-221ENST00000523308 MPHOSPH8Q99549 860 aa13.78□□□□□ -0.2
DENND3-221ENST00000523308 YIPF3Q9GZM5 350 aa13.78□□□□□ -0.2
DENND3-221ENST00000523308 ABCC6O95255 1503 aa13.78□□□□□ -0.2
DENND3-221ENST00000523308 GOLGB1Q14789 3259 aaKnown RBP13.78□□□□□ -0.2
DENND3-221ENST00000523308 TCRBV5S4A2TA0A5A2 114 aa13.77□□□□□ -0.2
DENND3-221ENST00000523308 PRDM1O75626 825 aa13.77□□□□□ -0.2
DENND3-221ENST00000523308 STAM2O75886 525 aa13.77□□□□□ -0.2
DENND3-221ENST00000523308 RBP3P10745 1247 aa13.77□□□□□ -0.2
DENND3-221ENST00000523308 USP5P45974 858 aa13.77□□□□□ -0.2
DENND3-221ENST00000523308 CCT8P50990 548 aa13.77□□□□□ -0.2
DENND3-221ENST00000523308 C10orf76Q5T2E6 689 aa13.77□□□□□ -0.2
DENND3-221ENST00000523308 NCCRP1Q6ZVX7 275 aaPredicted RBP13.77□□□□□ -0.2
DENND3-221ENST00000523308 DPH6Q7L8W6 267 aa13.77□□□□□ -0.2
DENND3-221ENST00000523308 ZNF280CQ8ND82 737 aa13.77□□□□□ -0.2
DENND3-221ENST00000523308 USP6NLQ92738 828 aa13.77□□□□□ -0.2
DENND3-221ENST00000523308 HVCN1Q96D96 273 aa13.77□□□□□ -0.2
DENND3-221ENST00000523308 PPP1R13BQ96KQ4 1090 aa13.77□□□□□ -0.2
DENND3-221ENST00000523308 SLC4A4Q9Y6R1 1079 aa13.77□□□□□ -0.2
DENND3-221ENST00000523308 KCNQ4P56696 695 aa13.77□□□□□ -0.21
DENND3-221ENST00000523308 CCDC93Q567U6 631 aa13.77□□□□□ -0.21
DENND3-221ENST00000523308 SUSD4Q5VX71 490 aa13.77□□□□□ -0.21
DENND3-221ENST00000523308 MIS18BP1Q6P0N0 1132 aa13.77□□□□□ -0.21
DENND3-221ENST00000523308 BICDL1Q6ZP65 573 aa13.77□□□□□ -0.21
DENND3-221ENST00000523308 UBR2Q8IWV8 1755 aa13.77□□□□□ -0.21
DENND3-221ENST00000523308 FRS2Q8WU20 508 aa13.77□□□□□ -0.21
DENND3-221ENST00000523308 ZFAND2BQ8WV99 257 aa13.77□□□□□ -0.21
DENND3-221ENST00000523308 C1orf74Q96LT6 269 aa13.77□□□□□ -0.21
DENND3-221ENST00000523308 PLA2G12BQ9BX93 195 aa13.77□□□□□ -0.21
DENND3-221ENST00000523308 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.77□□□□□ -0.21
DENND3-221ENST00000523308 TCF3P15923 654 aa13.77□□□□□ -0.21
DENND3-221ENST00000523308 IBSPP21815 317 aaPredicted RBP13.77□□□□□ -0.21
DENND3-221ENST00000523308 BMP6P22004 513 aa13.77□□□□□ -0.21
DENND3-221ENST00000523308 SSRP1Q08945 709 aaKnown RBP13.77□□□□□ -0.21
DENND3-221ENST00000523308 CBX3Q13185 183 aa13.77□□□□□ -0.21
DENND3-221ENST00000523308 TMCO3Q6UWJ1 677 aa13.77□□□□□ -0.21
DENND3-221ENST00000523308 DIS3L2Q8IYB7 885 aaKnown RBP13.77□□□□□ -0.21
DENND3-221ENST00000523308 PCDH18Q9HCL0 1135 aa13.77□□□□□ -0.21
DENND3-221ENST00000523308 KCNH3Q9ULD8 1083 aa13.77□□□□□ -0.21
DENND3-221ENST00000523308 TNS2Q63HR2 1409 aa13.76□□□□□ -0.21
DENND3-221ENST00000523308 PDE8AO60658 829 aa13.76□□□□□ -0.21
DENND3-221ENST00000523308 EVX2Q03828 476 aa13.76□□□□□ -0.21
DENND3-221ENST00000523308 UBE3CQ15386 1083 aa13.76□□□□□ -0.21
DENND3-221ENST00000523308 PUM3Q15397 648 aaKnown RBP13.76□□□□□ -0.21
DENND3-221ENST00000523308 ERCC6LQ2NKX8 1250 aa13.76□□□□□ -0.21
DENND3-221ENST00000523308 POTEDQ86YR6 584 aa13.76□□□□□ -0.21
DENND3-221ENST00000523308 FBXL16Q8N461 479 aa13.76□□□□□ -0.21
DENND3-221ENST00000523308 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.76□□□□□ -0.21
DENND3-221ENST00000523308 RNPC3Q96LT9 517 aaKnown RBP13.76□□□□□ -0.21
DENND3-221ENST00000523308 UTP14AQ9BVJ6 771 aaKnown RBP13.76□□□□□ -0.21
DENND3-221ENST00000523308 LUC7LQ9NQ29 371 aaKnown RBP13.76□□□□□ -0.21
DENND3-221ENST00000523308 AATFQ9NY61 560 aaKnown RBP eCLIP13.76□□□□□ -0.21
DENND3-221ENST00000523308 LRP2BPQ9P2M1 347 aa13.76□□□□□ -0.21
DENND3-221ENST00000523308 CARD8Q9Y2G2 431 aa13.76□□□□□ -0.21
DENND3-221ENST00000523308 PCDHB6Q9Y5E3 794 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms