RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 DDX41Q9UJV9 622 aaKnown RBP18.76■□□□□ 0.59
CLN8-206ENST00000523237 LAMA2P24043 3122 aaKnown RBP18.76■□□□□ 0.59
CLN8-206ENST00000523237 MMP3P08254 477 aa18.75■□□□□ 0.59
CLN8-206ENST00000523237 CCND2P30279 289 aa18.75■□□□□ 0.59
CLN8-206ENST00000523237 ARHGAP1Q07960 439 aa18.75■□□□□ 0.59
CLN8-206ENST00000523237 KRT32Q14532 448 aa18.75■□□□□ 0.59
CLN8-206ENST00000523237 NBPF20Q3BBV1 942 aa18.75■□□□□ 0.59
CLN8-206ENST00000523237 TSGA10IPQ3SY00 556 aa18.75■□□□□ 0.59
CLN8-206ENST00000523237 FAM47CQ5HY64 1035 aa18.75■□□□□ 0.59
CLN8-206ENST00000523237 NFRKBQ6P4R8 1299 aa18.75■□□□□ 0.59
CLN8-206ENST00000523237 KCNV1Q6PIU1 500 aa18.75■□□□□ 0.59
CLN8-206ENST00000523237 VSIG10LQ86VR7 867 aa18.75■□□□□ 0.59
CLN8-206ENST00000523237 SGMS1Q86VZ5 419 aa18.75■□□□□ 0.59
CLN8-206ENST00000523237 SRBD1Q8N5C6 995 aaKnown RBP18.75■□□□□ 0.59
CLN8-206ENST00000523237 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.75■□□□□ 0.595e-8■■■■□ 21.4
CLN8-206ENST00000523237 NOC4LQ9BVI4 516 aaKnown RBP18.75■□□□□ 0.59
CLN8-206ENST00000523237 MTMR10Q9NXD2 777 aa18.75■□□□□ 0.59
CLN8-206ENST00000523237 PLEKHA8P1O95397 391 aa18.74■□□□□ 0.59
CLN8-206ENST00000523237 NEFLP07196 543 aa18.74■□□□□ 0.59
CLN8-206ENST00000523237 RXRAP19793 462 aa18.74■□□□□ 0.59
CLN8-206ENST00000523237 PTPN11Q06124 597 aaPredicted RBP18.74■□□□□ 0.59
CLN8-206ENST00000523237 ZNF697Q5TEC3 545 aa18.74■□□□□ 0.59
CLN8-206ENST00000523237 SYNE3Q6ZMZ3 975 aa18.74■□□□□ 0.59
CLN8-206ENST00000523237 FANCBQ8NB91 859 aa18.74■□□□□ 0.59
CLN8-206ENST00000523237 EMID1Q96A84 441 aaPredicted RBP18.74■□□□□ 0.59
CLN8-206ENST00000523237 TRMT13Q9NUP7 481 aaKnown RBP18.74■□□□□ 0.59
CLN8-206ENST00000523237 RGS20O76081 388 aa18.73■□□□□ 0.59
CLN8-206ENST00000523237 CASTP20810 708 aaKnown RBP18.73■□□□□ 0.59
CLN8-206ENST00000523237 LAMC2Q13753 1193 aa18.73■□□□□ 0.59
CLN8-206ENST00000523237 DGKDQ16760 1214 aa18.73■□□□□ 0.59
CLN8-206ENST00000523237 TMEM240Q5SV17 173 aa18.73■□□□□ 0.59
CLN8-206ENST00000523237 PSRC1Q6PGN9 363 aaPredicted RBP18.73■□□□□ 0.59
CLN8-206ENST00000523237 DHX32Q7L7V1 743 aaKnown RBP18.73■□□□□ 0.59
CLN8-206ENST00000523237 MICU3Q86XE3 530 aa18.73■□□□□ 0.59
CLN8-206ENST00000523237 DHX37Q8IY37 1157 aaKnown RBP18.73■□□□□ 0.59
CLN8-206ENST00000523237 IL31RAQ8NI17 732 aa18.73■□□□□ 0.59
CLN8-206ENST00000523237 CUL5Q93034 780 aa18.73■□□□□ 0.59
CLN8-206ENST00000523237 IL23AQ9NPF7 189 aa18.73■□□□□ 0.59
CLN8-206ENST00000523237 UMODL1Q5DID0 1318 aa18.73■□□□□ 0.59
CLN8-206ENST00000523237 TGFB3P10600 412 aa18.72■□□□□ 0.59
CLN8-206ENST00000523237 CCL23P55773 120 aa18.72■□□□□ 0.59
CLN8-206ENST00000523237 EXOSC10Q01780 885 aaKnown RBP18.72■□□□□ 0.59
CLN8-206ENST00000523237 C16orf59Q7L2K0 433 aa18.72■□□□□ 0.59
CLN8-206ENST00000523237 RAB11FIP4Q86YS3 637 aa18.72■□□□□ 0.59
CLN8-206ENST00000523237 RASEFQ8IZ41 740 aa18.72■□□□□ 0.59
CLN8-206ENST00000523237 CMTR1Q8N1G2 835 aaKnown RBP18.72■□□□□ 0.59
CLN8-206ENST00000523237 PPTC7Q8NI37 304 aa18.72■□□□□ 0.59
CLN8-206ENST00000523237 SMARCC2Q8TAQ2 1214 aa18.72■□□□□ 0.59
CLN8-206ENST00000523237 FRMPD4Q14CM0 1322 aa18.72■□□□□ 0.59
CLN8-206ENST00000523237 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.71■□□□□ 0.59
CLN8-206ENST00000523237 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.71■□□□□ 0.59
CLN8-206ENST00000523237 PIK3CDO00329 1044 aa18.71■□□□□ 0.59
CLN8-206ENST00000523237 STAM2O75886 525 aa18.71■□□□□ 0.59
CLN8-206ENST00000523237 HMGB1P09429 215 aaKnown RBP18.71■□□□□ 0.59
CLN8-206ENST00000523237 ACRP10323 421 aa18.71■□□□□ 0.59
CLN8-206ENST00000523237 CYP2C9P11712 490 aa18.71■□□□□ 0.59
CLN8-206ENST00000523237 CHMP4BP1P59074 171 aa18.71■□□□□ 0.59
CLN8-206ENST00000523237 ADCK5Q3MIX3 580 aa18.71■□□□□ 0.59
CLN8-206ENST00000523237 APOA5Q6Q788 366 aa18.71■□□□□ 0.59
CLN8-206ENST00000523237 TMTC3Q6ZXV5 915 aa18.71■□□□□ 0.59
CLN8-206ENST00000523237 ZNF365Q70YC5 407 aa18.71■□□□□ 0.59
CLN8-206ENST00000523237 CCDC82Q8N4S0 544 aa18.71■□□□□ 0.59
CLN8-206ENST00000523237 STXBP5LQ9Y2K9 1186 aa18.71■□□□□ 0.59
CLN8-206ENST00000523237 GNPTABQ3T906 1256 aa18.7■□□□□ 0.58
CLN8-206ENST00000523237 CELF3Q5SZQ8 465 aaKnown RBP18.7■□□□□ 0.58
CLN8-206ENST00000523237 USP17L6PQ6QN14 398 aa18.7■□□□□ 0.58
CLN8-206ENST00000523237 RPUSD2Q8IZ73 545 aaKnown RBP18.7■□□□□ 0.58
CLN8-206ENST00000523237 PPP1R13LQ8WUF5 828 aa18.7■□□□□ 0.58
CLN8-206ENST00000523237 TCEANC2Q96MN5 208 aa18.7■□□□□ 0.58
CLN8-206ENST00000523237 FAM161BQ96MY7 647 aa18.7■□□□□ 0.58
CLN8-206ENST00000523237 KATNAL1Q9BW62 490 aa18.7■□□□□ 0.58
CLN8-206ENST00000523237 WNT8AQ9H1J5 351 aa18.7■□□□□ 0.58
CLN8-206ENST00000523237 MTIF3Q9H2K0 278 aaKnown RBP18.7■□□□□ 0.58
CLN8-206ENST00000523237 RBM28Q9NW13 759 aaKnown RBP18.7■□□□□ 0.58
CLN8-206ENST00000523237 NOD1Q9Y239 953 aa18.7■□□□□ 0.58
CLN8-206ENST00000523237 TANC1Q9C0D5 1861 aa18.69■□□□□ 0.58
CLN8-206ENST00000523237 MEIS2O14770 477 aa18.69■□□□□ 0.58
CLN8-206ENST00000523237 ZBTB43O43298 467 aa18.69■□□□□ 0.58
CLN8-206ENST00000523237 GGPS1O95749 300 aa18.69■□□□□ 0.58
CLN8-206ENST00000523237 FGBP02675 491 aa18.69■□□□□ 0.58
CLN8-206ENST00000523237 UBA1P22314 1058 aaKnown RBP18.69■□□□□ 0.58
CLN8-206ENST00000523237 RASIP1Q5U651 963 aa18.69■□□□□ 0.58
CLN8-206ENST00000523237 MYSM1Q5VVJ2 828 aa18.69■□□□□ 0.58
CLN8-206ENST00000523237 SESTD1Q86VW0 696 aa18.69■□□□□ 0.58
CLN8-206ENST00000523237 KAT2BQ92831 832 aa18.69■□□□□ 0.58
CLN8-206ENST00000523237 ZFP91Q96JP5 570 aaPredicted RBP18.69■□□□□ 0.58
CLN8-206ENST00000523237 SPATA33Q96N06 139 aa18.69■□□□□ 0.58
CLN8-206ENST00000523237 PSTPIP2Q9H939 334 aa18.69■□□□□ 0.58
CLN8-206ENST00000523237 SCN5AQ14524 2016 aa18.68■□□□□ 0.58
CLN8-206ENST00000523237 TMEM265A0A087WTH1 108 aa18.68■□□□□ 0.58
CLN8-206ENST00000523237 hCG_1642624A0A1W2PR95 340 aa18.68■□□□□ 0.58
CLN8-206ENST00000523237 REC8O95072 547 aa18.68■□□□□ 0.58
CLN8-206ENST00000523237 MRPS9P82933 396 aaKnown RBP18.68■□□□□ 0.58
CLN8-206ENST00000523237 FGD1P98174 961 aa18.68■□□□□ 0.58
CLN8-206ENST00000523237 SP2Q02086 613 aa18.68■□□□□ 0.58
CLN8-206ENST00000523237 RTN1Q16799 776 aa18.68■□□□□ 0.58
CLN8-206ENST00000523237 XRRA1Q6P2D8 792 aa18.68■□□□□ 0.58
CLN8-206ENST00000523237 HERVK_113Q902F9 699 aa18.68■□□□□ 0.58
CLN8-206ENST00000523237 SCLYQ96I15 445 aa18.68■□□□□ 0.58
CLN8-206ENST00000523237 INPP4AQ96PE3 977 aaPredicted RBP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms