RNA–Protein interactions for RNA: ENST00000522959.5

ARFGAP1-216, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 2

Gene ARFGAP1, Length 556 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-216ENST00000522959 SP2Q02086 613 aa18.01■□□□□ 0.47
ARFGAP1-216ENST00000522959 TTLL4Q14679 1199 aa18.01■□□□□ 0.47
ARFGAP1-216ENST00000522959 PGM5Q15124 567 aa18.01■□□□□ 0.47
ARFGAP1-216ENST00000522959 RASIP1Q5U651 963 aa18.01■□□□□ 0.47
ARFGAP1-216ENST00000522959 CATIPQ7Z7H3 387 aa18.01■□□□□ 0.47
ARFGAP1-216ENST00000522959 POLR3EQ9NVU0 708 aa18.01■□□□□ 0.47
ARFGAP1-216ENST00000522959 TANC1Q9C0D5 1861 aa18.01■□□□□ 0.47
ARFGAP1-216ENST00000522959 hCG_1642624A0A1W2PR95 340 aa18■□□□□ 0.47
ARFGAP1-216ENST00000522959 GRXCR1A8MXD5 290 aa18■□□□□ 0.47
ARFGAP1-216ENST00000522959 SORBS3O60504 671 aa18■□□□□ 0.47
ARFGAP1-216ENST00000522959 MYCLP12524 364 aaPredicted RBP18■□□□□ 0.47
ARFGAP1-216ENST00000522959 CPT1AP50416 773 aa18■□□□□ 0.47
ARFGAP1-216ENST00000522959 MRPS9P82933 396 aaKnown RBP18■□□□□ 0.47
ARFGAP1-216ENST00000522959 EXOSC10Q01780 885 aaKnown RBP18■□□□□ 0.47
ARFGAP1-216ENST00000522959 SART3Q15020 963 aaKnown RBP18■□□□□ 0.47
ARFGAP1-216ENST00000522959 ZNF365Q70YC5 407 aa18■□□□□ 0.47
ARFGAP1-216ENST00000522959 VSIG10LQ86VR7 867 aa18■□□□□ 0.47
ARFGAP1-216ENST00000522959 SCLYQ96I15 445 aa18■□□□□ 0.47
ARFGAP1-216ENST00000522959 RNPC3Q96LT9 517 aaKnown RBP18■□□□□ 0.47
ARFGAP1-216ENST00000522959 MAP3K14Q99558 947 aa18■□□□□ 0.47
ARFGAP1-216ENST00000522959 MTG1Q9BT17 334 aaPredicted RBP18■□□□□ 0.47
ARFGAP1-216ENST00000522959 TELO2Q9Y4R8 837 aa18■□□□□ 0.47
ARFGAP1-216ENST00000522959 TLR3O15455 904 aaKnown RBP17.99■□□□□ 0.47
ARFGAP1-216ENST00000522959 EIF3JO75822 258 aaKnown RBP17.99■□□□□ 0.47
ARFGAP1-216ENST00000522959 DDAH1O94760 285 aa17.99■□□□□ 0.47
ARFGAP1-216ENST00000522959 MMP3P08254 477 aa17.99■□□□□ 0.47
ARFGAP1-216ENST00000522959 LIFRP42702 1097 aa17.99■□□□□ 0.47
ARFGAP1-216ENST00000522959 CASC1Q6TDU7 716 aa17.99■□□□□ 0.47
ARFGAP1-216ENST00000522959 FCHSD1Q86WN1 690 aa17.99■□□□□ 0.47
ARFGAP1-216ENST00000522959 TMEM87BQ96K49 555 aa17.99■□□□□ 0.47
ARFGAP1-216ENST00000522959 MTA3Q9BTC8 594 aa17.99■□□□□ 0.47
ARFGAP1-216ENST00000522959 SPZ1Q9BXG8 430 aa17.99■□□□□ 0.47
ARFGAP1-216ENST00000522959 HIPK3Q9H422 1215 aa17.99■□□□□ 0.47
ARFGAP1-216ENST00000522959 CXXC1Q9P0U4 656 aaPredicted RBP17.99■□□□□ 0.47
ARFGAP1-216ENST00000522959 VCANP13611 3396 aa17.99■□□□□ 0.47
ARFGAP1-216ENST00000522959 MEIS2O14770 477 aa17.98■□□□□ 0.47
ARFGAP1-216ENST00000522959 GH1P01241 217 aa17.98■□□□□ 0.47
ARFGAP1-216ENST00000522959 CPA1P15085 419 aa17.98■□□□□ 0.47
ARFGAP1-216ENST00000522959 SMAD3P84022 425 aaKnown RBP17.98■□□□□ 0.47
ARFGAP1-216ENST00000522959 SEMA3FQ13275 785 aa17.98■□□□□ 0.47
ARFGAP1-216ENST00000522959 HIC1Q14526 733 aa17.98■□□□□ 0.47
ARFGAP1-216ENST00000522959 USP17L6PQ6QN14 398 aa17.98■□□□□ 0.47
ARFGAP1-216ENST00000522959 MPHOSPH6Q99547 160 aaKnown RBP17.98■□□□□ 0.47
ARFGAP1-216ENST00000522959 SEMA6BQ9H3T3 888 aa17.98■□□□□ 0.47
ARFGAP1-216ENST00000522959 BRPF3Q9ULD4 1205 aa17.98■□□□□ 0.47
ARFGAP1-216ENST00000522959 B4DLN1 442 aa17.97■□□□□ 0.47
ARFGAP1-216ENST00000522959 GCOM1H8Y6P7 765 aaPredicted RBP17.97■□□□□ 0.47
ARFGAP1-216ENST00000522959 POLR2MP0CAP2 368 aa17.97■□□□□ 0.47
ARFGAP1-216ENST00000522959 PBX2P40425 430 aa17.97■□□□□ 0.47
ARFGAP1-216ENST00000522959 MRPL12P52815 198 aaKnown RBP17.97■□□□□ 0.47
ARFGAP1-216ENST00000522959 MYSM1Q5VVJ2 828 aa17.97■□□□□ 0.47
ARFGAP1-216ENST00000522959 CCDC82Q8N4S0 544 aa17.97■□□□□ 0.47
ARFGAP1-216ENST00000522959 IL23AQ9NPF7 189 aa17.97■□□□□ 0.47
ARFGAP1-216ENST00000522959 MAP3K20Q9NYL2 800 aaKnown RBP17.97■□□□□ 0.47
ARFGAP1-216ENST00000522959 SPTBN5Q9NRC6 3674 aaKnown RBP17.97■□□□□ 0.47
ARFGAP1-216ENST00000522959 FRMPD4Q14CM0 1322 aa17.97■□□□□ 0.47
ARFGAP1-216ENST00000522959 CCDC69A6NI79 296 aa17.96■□□□□ 0.47
ARFGAP1-216ENST00000522959 CDC45O75419 566 aa17.96■□□□□ 0.47
ARFGAP1-216ENST00000522959 SMARCA1P28370 1054 aa17.96■□□□□ 0.47
ARFGAP1-216ENST00000522959 PPIGQ13427 754 aaKnown RBP eCLIP17.96■□□□□ 0.479e-13■■□□□ 14.5
ARFGAP1-216ENST00000522959 HSDL1Q3SXM5 330 aa17.96■□□□□ 0.47
ARFGAP1-216ENST00000522959 TSGA10IPQ3SY00 556 aa17.96■□□□□ 0.47
ARFGAP1-216ENST00000522959 GDF6Q6KF10 455 aaPredicted RBP17.96■□□□□ 0.47
ARFGAP1-216ENST00000522959 NFXL1Q6ZNB6 911 aa17.96■□□□□ 0.47
ARFGAP1-216ENST00000522959 SGMS1Q86VZ5 419 aa17.96■□□□□ 0.47
ARFGAP1-216ENST00000522959 TMEM199Q8N511 208 aa17.96■□□□□ 0.47
ARFGAP1-216ENST00000522959 CTCFLQ8NI51 663 aaPredicted RBP17.96■□□□□ 0.47
ARFGAP1-216ENST00000522959 EMID1Q96A84 441 aaPredicted RBP17.96■□□□□ 0.47
ARFGAP1-216ENST00000522959 FAM217BQ9NTX9 383 aaPredicted RBP17.96■□□□□ 0.47
ARFGAP1-216ENST00000522959 STXBP5LQ9Y2K9 1186 aa17.96■□□□□ 0.47
ARFGAP1-216ENST00000522959 TRANK1O15050 2925 aa17.95■□□□□ 0.46
ARFGAP1-216ENST00000522959 CHMP4BP1P59074 171 aa17.95■□□□□ 0.46
ARFGAP1-216ENST00000522959 FUT2Q10981 343 aa17.95■□□□□ 0.46
ARFGAP1-216ENST00000522959 GPNMBQ14956 572 aa17.95■□□□□ 0.46
ARFGAP1-216ENST00000522959 FAM47CQ5HY64 1035 aa17.95■□□□□ 0.46
ARFGAP1-216ENST00000522959 NFRKBQ6P4R8 1299 aa17.95■□□□□ 0.46
ARFGAP1-216ENST00000522959 SAMD3Q8N6K7 520 aa17.95■□□□□ 0.46
ARFGAP1-216ENST00000522959 FANCBQ8NB91 859 aa17.95■□□□□ 0.46
ARFGAP1-216ENST00000522959 KCNB2Q92953 911 aa17.95■□□□□ 0.46
ARFGAP1-216ENST00000522959 CCDC136Q96JN2 1154 aa17.95■□□□□ 0.46
ARFGAP1-216ENST00000522959 NEK1Q96PY6 1258 aa17.95■□□□□ 0.46
ARFGAP1-216ENST00000522959 SEZ6LQ9BYH1 1024 aa17.95■□□□□ 0.46
ARFGAP1-216ENST00000522959 MRVI1Q9Y6F6 885 aa17.95■□□□□ 0.46
ARFGAP1-216ENST00000522959 KAT6AQ92794 2004 aa17.94■□□□□ 0.46
ARFGAP1-216ENST00000522959 HAS3O00219 553 aa17.94■□□□□ 0.46
ARFGAP1-216ENST00000522959 KPNA6O60684 536 aa17.94■□□□□ 0.46
ARFGAP1-216ENST00000522959 ZNF286BP0CG31 522 aa17.94■□□□□ 0.46
ARFGAP1-216ENST00000522959 HOXD8P13378 290 aaPredicted RBP17.94■□□□□ 0.46
ARFGAP1-216ENST00000522959 UBA1P22314 1058 aaKnown RBP17.94■□□□□ 0.46
ARFGAP1-216ENST00000522959 CELF3Q5SZQ8 465 aaKnown RBP17.94■□□□□ 0.46
ARFGAP1-216ENST00000522959 TYW1BQ6NUM6 668 aa17.94■□□□□ 0.46
ARFGAP1-216ENST00000522959 APOA5Q6Q788 366 aa17.94■□□□□ 0.46
ARFGAP1-216ENST00000522959 TMTC3Q6ZXV5 915 aa17.94■□□□□ 0.46
ARFGAP1-216ENST00000522959 TMTC2Q8N394 836 aa17.94■□□□□ 0.46
ARFGAP1-216ENST00000522959 HERVK_113Q902F9 699 aa17.94■□□□□ 0.46
ARFGAP1-216ENST00000522959 DHX38Q92620 1227 aaKnown RBP17.94■□□□□ 0.46
ARFGAP1-216ENST00000522959 RRP36Q96EU6 259 aaKnown RBP17.94■□□□□ 0.46
ARFGAP1-216ENST00000522959 CDX2Q99626 313 aaPredicted RBP17.94■□□□□ 0.46
ARFGAP1-216ENST00000522959 RTEL1Q9NZ71 1219 aa17.94■□□□□ 0.46
ARFGAP1-216ENST00000522959 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms