RNA–Protein interactions for RNA: ENST00000522653.5

TCF7-223, Transcript of transcription factor 7, human

TSL 2

Gene TCF7, Length 5,340 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF7-223	ENST00000522653	USP6	P35125	1406 aa		11.27	□□□□□ -0.61
TCF7-223	ENST00000522653		A0A087WUV0	522 aa	Predicted RBP	11.27	□□□□□ -0.61
TCF7-223	ENST00000522653	ARPP19	P56211	112 aa		11.27	□□□□□ -0.61
TCF7-223	ENST00000522653	ETF1	P62495	437 aa	Known RBP	11.27	□□□□□ -0.61
TCF7-223	ENST00000522653	ITK	Q08881	620 aa		11.27	□□□□□ -0.61
TCF7-223	ENST00000522653	AP3B2	Q13367	1082 aa		11.27	□□□□□ -0.61
TCF7-223	ENST00000522653	CDC37	Q16543	378 aa	Predicted RBP	11.27	□□□□□ -0.61
TCF7-223	ENST00000522653	SIX6OS1	Q8N1H7	587 aa		11.27	□□□□□ -0.61
TCF7-223	ENST00000522653	OTUD5	Q96G74	571 aa		11.27	□□□□□ -0.61
TCF7-223	ENST00000522653	GLT1D1	Q96MS3	346 aa		11.27	□□□□□ -0.61
TCF7-223	ENST00000522653	ACCS	Q96QU6	501 aa		11.27	□□□□□ -0.61
TCF7-223	ENST00000522653	CUEDC2	Q9H467	287 aa		11.27	□□□□□ -0.61
TCF7-223	ENST00000522653	PCDHA12	Q9UN75	941 aa		11.27	□□□□□ -0.61
TCF7-223	ENST00000522653	IPP	Q9Y573	584 aa		11.27	□□□□□ -0.61
TCF7-223	ENST00000522653	USP19	O94966	1318 aa		11.26	□□□□□ -0.61
TCF7-223	ENST00000522653	VWA3A	A6NCI4	1184 aa		11.26	□□□□□ -0.61
TCF7-223	ENST00000522653	FANCC	Q00597	558 aa		11.26	□□□□□ -0.61
TCF7-223	ENST00000522653	MYL7	Q01449	175 aa		11.26	□□□□□ -0.61
TCF7-223	ENST00000522653	NBPF10	Q6P3W6	841 aa	Known RBP	11.26	□□□□□ -0.61
TCF7-223	ENST00000522653	DBNDD2	Q9BQY9	259 aa		11.26	□□□□□ -0.61
TCF7-223	ENST00000522653	DDX25	Q9UHL0	483 aa	Known RBP	11.26	□□□□□ -0.61
TCF7-223	ENST00000522653	RNF8	O76064	485 aa		11.26	□□□□□ -0.61
TCF7-223	ENST00000522653	ZAP70	P43403	619 aa		11.26	□□□□□ -0.61
TCF7-223	ENST00000522653	ATP11A	P98196	1134 aa		11.26	□□□□□ -0.61
TCF7-223	ENST00000522653	ZNF174	Q15697	407 aa		11.26	□□□□□ -0.61
TCF7-223	ENST00000522653	HSP90AA4P	Q58FG1	418 aa		11.26	□□□□□ -0.61
TCF7-223	ENST00000522653	FAM178B	Q8IXR5	827 aa		11.26	□□□□□ -0.61
TCF7-223	ENST00000522653	AGBL3	Q8NEM8	1001 aa		11.26	□□□□□ -0.61
TCF7-223	ENST00000522653	TRIM56	Q9BRZ2	755 aa	Known RBP	11.26	□□□□□ -0.61
TCF7-223	ENST00000522653	NOC4L	Q9BVI4	516 aa	Known RBP	11.26	□□□□□ -0.61
TCF7-223	ENST00000522653	RPF1	Q9H9Y2	349 aa	Known RBP	11.26	□□□□□ -0.61
TCF7-223	ENST00000522653	LUC7L2	Q9Y383	392 aa	Known RBP	11.26	□□□□□ -0.61
TCF7-223	ENST00000522653	THAP12	O43422	761 aa		11.26	□□□□□ -0.61
TCF7-223	ENST00000522653	ACTN4	O43707	911 aa	Known RBP	11.26	□□□□□ -0.61
TCF7-223	ENST00000522653	ST8SIA6	P61647	398 aa		11.26	□□□□□ -0.61
TCF7-223	ENST00000522653	BLID	Q8IZY5	108 aa		11.26	□□□□□ -0.61
TCF7-223	ENST00000522653	BEST2	Q8NFU1	509 aa		11.26	□□□□□ -0.61
TCF7-223	ENST00000522653	TBC1D22B	Q9NU19	505 aa		11.26	□□□□□ -0.61
TCF7-223	ENST00000522653	CNOT7	Q9UIV1	285 aa	Known RBP	11.26	□□□□□ -0.61
TCF7-223	ENST00000522653	CDC25B	P30305	580 aa		11.26	□□□□□ -0.61
TCF7-223	ENST00000522653	SLC8A1	P32418	973 aa		11.26	□□□□□ -0.61
TCF7-223	ENST00000522653	CPT1A	P50416	773 aa		11.26	□□□□□ -0.61
TCF7-223	ENST00000522653	CYP26C1	Q6V0L0	522 aa		11.26	□□□□□ -0.61
TCF7-223	ENST00000522653	VPS52	Q8N1B4	723 aa		11.26	□□□□□ -0.61
TCF7-223	ENST00000522653	RDH13	Q8NBN7	331 aa		11.26	□□□□□ -0.61
TCF7-223	ENST00000522653	TTC25	Q96NG3	672 aa		11.26	□□□□□ -0.61
TCF7-223	ENST00000522653	SPATS2L	Q9NUQ6	558 aa	Known RBP	11.26	□□□□□ -0.61
TCF7-223	ENST00000522653	FBLN1	P23142	703 aa		11.25	□□□□□ -0.61
TCF7-223	ENST00000522653	SFN	P31947	248 aa		11.25	□□□□□ -0.61
TCF7-223	ENST00000522653	UBXN1	Q04323	297 aa		11.25	□□□□□ -0.61
TCF7-223	ENST00000522653	IER5	Q5VY09	327 aa		11.25	□□□□□ -0.61
TCF7-223	ENST00000522653	SUCLG2	Q96I99	432 aa		11.25	□□□□□ -0.61
TCF7-223	ENST00000522653	KIAA1586	Q9HCI6	787 aa		11.25	□□□□□ -0.61
TCF7-223	ENST00000522653	HPCAL4	Q9UM19	191 aa		11.25	□□□□□ -0.61
TCF7-223	ENST00000522653	CYP2E1	P05181	493 aa	Predicted RBP	11.25	□□□□□ -0.61
TCF7-223	ENST00000522653	LIG3	P49916	1009 aa		11.25	□□□□□ -0.61
TCF7-223	ENST00000522653	PDXDC2P	Q6P474	469 aa		11.25	□□□□□ -0.61
TCF7-223	ENST00000522653	TTC23L	Q6PF05	361 aa		11.25	□□□□□ -0.61
TCF7-223	ENST00000522653	MICALL2	Q8IY33	904 aa		11.25	□□□□□ -0.61
TCF7-223	ENST00000522653	RPUSD2	Q8IZ73	545 aa	Known RBP	11.25	□□□□□ -0.61
TCF7-223	ENST00000522653	PDLIM2	Q96JY6	352 aa		11.25	□□□□□ -0.61
TCF7-223	ENST00000522653	EIF4E1B	A6NMX2	242 aa	Known RBP	11.25	□□□□□ -0.61
TCF7-223	ENST00000522653	MYO1C	O00159	1063 aa		11.25	□□□□□ -0.61
TCF7-223	ENST00000522653	IRX5	P78411	483 aa	Predicted RBP	11.25	□□□□□ -0.61
TCF7-223	ENST00000522653	RBBP5	Q15291	538 aa	Known RBP	11.25	□□□□□ -0.61
TCF7-223	ENST00000522653	PPP2R5E	Q16537	467 aa		11.25	□□□□□ -0.61
TCF7-223	ENST00000522653	LPAR1	Q92633	364 aa		11.25	□□□□□ -0.61
TCF7-223	ENST00000522653	STN1	Q9H668	368 aa	Known RBP	11.25	□□□□□ -0.61
TCF7-223	ENST00000522653	ZNF212	Q9UDV6	495 aa		11.25	□□□□□ -0.61
TCF7-223	ENST00000522653	CCL15-CCL14	A0A0B4J2E2	113 aa		11.25	□□□□□ -0.61
TCF7-223	ENST00000522653	WDR46	O15213	610 aa	Known RBP	11.25	□□□□□ -0.61
TCF7-223	ENST00000522653	CCL15	Q16663	113 aa		11.25	□□□□□ -0.61
TCF7-223	ENST00000522653		Q3C1V9	767 aa		11.25	□□□□□ -0.61
TCF7-223	ENST00000522653	MCPH1	Q8NEM0	835 aa		11.25	□□□□□ -0.61
TCF7-223	ENST00000522653	ZBTB9	Q96C00	473 aa		11.25	□□□□□ -0.61
TCF7-223	ENST00000522653	CABS1	Q96KC9	395 aa		11.25	□□□□□ -0.61
TCF7-223	ENST00000522653	OLFML3	Q9NRN5	406 aa		11.25	□□□□□ -0.61
TCF7-223	ENST00000522653	OR52Z1	P0C646	297 aa		11.24	□□□□□ -0.61
TCF7-223	ENST00000522653	KPNA2	P52292	529 aa	Known RBP	11.24	□□□□□ -0.61
TCF7-223	ENST00000522653	COG7	P83436	770 aa		11.24	□□□□□ -0.61
TCF7-223	ENST00000522653	KRT76	Q01546	638 aa		11.24	□□□□□ -0.61
TCF7-223	ENST00000522653	BZW1	Q7L1Q6	419 aa	Known RBP	11.24	□□□□□ -0.61
TCF7-223	ENST00000522653	IFNL3	Q8IZI9	196 aa		11.24	□□□□□ -0.61
TCF7-223	ENST00000522653	RAB20	Q9NX57	234 aa		11.24	□□□□□ -0.61
TCF7-223	ENST00000522653	STK17A	Q9UEE5	414 aa		11.24	□□□□□ -0.61
TCF7-223	ENST00000522653	MED23	Q9ULK4	1368 aa		11.24	□□□□□ -0.61
TCF7-223	ENST00000522653	TPD52	P55327	224 aa	Predicted RBP	11.24	□□□□□ -0.61
TCF7-223	ENST00000522653	PPP1R21	Q6ZMI0	780 aa		11.24	□□□□□ -0.61
TCF7-223	ENST00000522653	PPFIBP2	Q8ND30	876 aa		11.24	□□□□□ -0.61
TCF7-223	ENST00000522653	ZNF594	Q96JF6	807 aa	Predicted RBP	11.24	□□□□□ -0.61
TCF7-223	ENST00000522653	MMTAG2	Q9BU76	263 aa	Known RBP	11.24	□□□□□ -0.61
TCF7-223	ENST00000522653	KMT5A	Q9NQR1	393 aa		11.24	□□□□□ -0.61
TCF7-223	ENST00000522653	ST7	Q9NRC1	585 aa		11.24	□□□□□ -0.61
TCF7-223	ENST00000522653	TSKS	Q9UJT2	592 aa		11.24	□□□□□ -0.61
TCF7-223	ENST00000522653	PRDM15	P57071	1507 aa	Predicted RBP	11.24	□□□□□ -0.61
TCF7-223	ENST00000522653	RALA	P11233	206 aa		11.24	□□□□□ -0.61
TCF7-223	ENST00000522653	PCK1	P35558	622 aa		11.24	□□□□□ -0.61
TCF7-223	ENST00000522653	MAGEA9	P43362	315 aa		11.24	□□□□□ -0.61
TCF7-223	ENST00000522653	TRAPPC10	P48553	1259 aa		11.24	□□□□□ -0.61
TCF7-223	ENST00000522653	ARL4D	P49703	201 aa		11.24	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms