RNA–Protein interactions for RNA: ENST00000522504.5

TRAPPC9-213, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-213ENST00000522504 AFAP1L1Q8TED9 768 aa17.87■□□□□ 0.45
TRAPPC9-213ENST00000522504 ANKS1AQ92625 1134 aa17.87■□□□□ 0.45
TRAPPC9-213ENST00000522504 WNT8BQ93098 351 aa17.87■□□□□ 0.45
TRAPPC9-213ENST00000522504 RMDN3Q96TC7 470 aa17.87■□□□□ 0.45
TRAPPC9-213ENST00000522504 RNF41Q9H4P4 317 aaPredicted RBP17.87■□□□□ 0.45
TRAPPC9-213ENST00000522504 JMJD4Q9H9V9 463 aa17.87■□□□□ 0.45
TRAPPC9-213ENST00000522504 DDX41Q9UJV9 622 aaKnown RBP17.87■□□□□ 0.45
TRAPPC9-213ENST00000522504 ABCB11O95342 1321 aa17.87■□□□□ 0.45
TRAPPC9-213ENST00000522504 PTPRSQ13332 1948 aa17.86■□□□□ 0.45
TRAPPC9-213ENST00000522504 B4DLN1 442 aa17.86■□□□□ 0.45
TRAPPC9-213ENST00000522504 KIF28PB7ZC32 967 aa17.86■□□□□ 0.45
TRAPPC9-213ENST00000522504 OPLAHO14841 1288 aa17.86■□□□□ 0.45
TRAPPC9-213ENST00000522504 CKBP12277 381 aa17.86■□□□□ 0.45
TRAPPC9-213ENST00000522504 SELPP16109 830 aa17.86■□□□□ 0.45
TRAPPC9-213ENST00000522504 EIF2AK2P19525 551 aaKnown RBP17.86■□□□□ 0.45
TRAPPC9-213ENST00000522504 MRPL12P52815 198 aaKnown RBP17.86■□□□□ 0.45
TRAPPC9-213ENST00000522504 HIC1Q14526 733 aa17.86■□□□□ 0.45
TRAPPC9-213ENST00000522504 AAK1Q2M2I8 961 aa17.86■□□□□ 0.45
TRAPPC9-213ENST00000522504 TRAF7Q6Q0C0 670 aa17.86■□□□□ 0.45
TRAPPC9-213ENST00000522504 LRRC8DQ7L1W4 858 aa17.86■□□□□ 0.45
TRAPPC9-213ENST00000522504 ENAHQ8N8S7 591 aaPredicted RBP17.86■□□□□ 0.45
TRAPPC9-213ENST00000522504 HDAC6Q9UBN7 1215 aa17.86■□□□□ 0.45
TRAPPC9-213ENST00000522504 B4E1Z4 1266 aa17.85■□□□□ 0.45
TRAPPC9-213ENST00000522504 ZNF213O14771 459 aa17.85■□□□□ 0.45
TRAPPC9-213ENST00000522504 CXCL10P02778 98 aa17.85■□□□□ 0.45
TRAPPC9-213ENST00000522504 ZNF286BP0CG31 522 aa17.85■□□□□ 0.45
TRAPPC9-213ENST00000522504 KCNJ6P48051 423 aa17.85■□□□□ 0.45
TRAPPC9-213ENST00000522504 ZNF200P98182 395 aaPredicted RBP17.85■□□□□ 0.45
TRAPPC9-213ENST00000522504 RBL2Q08999 1139 aa17.85■□□□□ 0.45
TRAPPC9-213ENST00000522504 TRIP12Q14669 1992 aaPredicted RBP17.85■□□□□ 0.45
TRAPPC9-213ENST00000522504 MBTPS1Q14703 1052 aa17.85■□□□□ 0.45
TRAPPC9-213ENST00000522504 STXBP2Q15833 593 aa17.85■□□□□ 0.45
TRAPPC9-213ENST00000522504 TRIM71Q2Q1W2 868 aaKnown RBP17.85■□□□□ 0.45
TRAPPC9-213ENST00000522504 GDPD5Q8WTR4 605 aa17.85■□□□□ 0.45
TRAPPC9-213ENST00000522504 IWS1Q96ST2 819 aa17.85■□□□□ 0.45
TRAPPC9-213ENST00000522504 ZSCAN10Q96SZ4 725 aaPredicted RBP17.85■□□□□ 0.45
TRAPPC9-213ENST00000522504 EPHX3Q9H6B9 360 aa17.85■□□□□ 0.45
TRAPPC9-213ENST00000522504 KAT14Q9H8E8 782 aa17.85■□□□□ 0.45
TRAPPC9-213ENST00000522504 VAT1LQ9HCJ6 419 aa17.85■□□□□ 0.45
TRAPPC9-213ENST00000522504 GTF2IRD1Q9UHL9 959 aa17.85■□□□□ 0.45
TRAPPC9-213ENST00000522504 RGS20O76081 388 aa17.84■□□□□ 0.45
TRAPPC9-213ENST00000522504 CASTP20810 708 aaKnown RBP17.84■□□□□ 0.45
TRAPPC9-213ENST00000522504 PSEN2P49810 448 aa17.84■□□□□ 0.45
TRAPPC9-213ENST00000522504 DGKDQ16760 1214 aa17.84■□□□□ 0.45
TRAPPC9-213ENST00000522504 ARHGEF16Q5VV41 709 aa17.84■□□□□ 0.45
TRAPPC9-213ENST00000522504 CWC27Q6UX04 472 aaKnown RBP17.84■□□□□ 0.45
TRAPPC9-213ENST00000522504 FBXO11Q86XK2 927 aa17.84■□□□□ 0.45
TRAPPC9-213ENST00000522504 EMID1Q96A84 441 aaPredicted RBP17.84■□□□□ 0.45
TRAPPC9-213ENST00000522504 ALG1Q9BT22 464 aa17.84■□□□□ 0.45
TRAPPC9-213ENST00000522504 PXMP2Q9NR77 195 aa17.84■□□□□ 0.45
TRAPPC9-213ENST00000522504 ZSWIM5Q9P217 1185 aa17.84■□□□□ 0.45
TRAPPC9-213ENST00000522504 COG5Q9UP83 839 aa17.84■□□□□ 0.45
TRAPPC9-213ENST00000522504 BRWD1Q9NSI6 2320 aa17.84■□□□□ 0.45
TRAPPC9-213ENST00000522504 HAS3O00219 553 aa17.83■□□□□ 0.44
TRAPPC9-213ENST00000522504 SORBS3O60504 671 aa17.83■□□□□ 0.44
TRAPPC9-213ENST00000522504 PPP1R11O60927 126 aaPredicted RBP17.83■□□□□ 0.44
TRAPPC9-213ENST00000522504 EIF3JO75822 258 aaKnown RBP17.83■□□□□ 0.44
TRAPPC9-213ENST00000522504 F2P00734 622 aa17.83■□□□□ 0.44
TRAPPC9-213ENST00000522504 NR3C2P08235 984 aa17.83■□□□□ 0.44
TRAPPC9-213ENST00000522504 ASPRV1Q53RT3 343 aa17.83■□□□□ 0.44
TRAPPC9-213ENST00000522504 B4GALNT3Q6L9W6 998 aa17.83■□□□□ 0.44
TRAPPC9-213ENST00000522504 CNKSR3Q6P9H4 555 aa17.83■□□□□ 0.44
TRAPPC9-213ENST00000522504 IQCA1Q86XH1 822 aa17.83■□□□□ 0.44
TRAPPC9-213ENST00000522504 MCF2L2Q86YR7 1114 aa17.83■□□□□ 0.44
TRAPPC9-213ENST00000522504 PLEKHM2Q8IWE5 1019 aa17.83■□□□□ 0.44
TRAPPC9-213ENST00000522504 STAG2Q8N3U4 1231 aa17.83■□□□□ 0.44
TRAPPC9-213ENST00000522504 CCDC155Q8N6L0 562 aa17.83■□□□□ 0.44
TRAPPC9-213ENST00000522504 C7orf31Q8N865 590 aa17.83■□□□□ 0.44
TRAPPC9-213ENST00000522504 KHSRPQ92945 711 aaKnown RBP eCLIP17.83■□□□□ 0.44
TRAPPC9-213ENST00000522504 HLA-CQ95604 372 aa17.83■□□□□ 0.44
TRAPPC9-213ENST00000522504 MAF1Q9H063 256 aa17.83■□□□□ 0.44
TRAPPC9-213ENST00000522504 MTUS1Q9ULD2 1270 aa17.83■□□□□ 0.44
TRAPPC9-213ENST00000522504 MRPL11Q9Y3B7 192 aaKnown RBP17.83■□□□□ 0.44
TRAPPC9-213ENST00000522504 CFBP00751 764 aa17.82■□□□□ 0.44
TRAPPC9-213ENST00000522504 MFSD10Q14728 455 aa17.82■□□□□ 0.44
TRAPPC9-213ENST00000522504 KIAA0753Q2KHM9 967 aa17.82■□□□□ 0.44
TRAPPC9-213ENST00000522504 SLC35G1Q2M3R5 365 aa17.82■□□□□ 0.44
TRAPPC9-213ENST00000522504 ZNF618Q5T7W0 954 aa17.82■□□□□ 0.44
TRAPPC9-213ENST00000522504 SMC5Q8IY18 1101 aa17.82■□□□□ 0.44
TRAPPC9-213ENST00000522504 PPTC7Q8NI37 304 aa17.82■□□□□ 0.44
TRAPPC9-213ENST00000522504 ZBED2Q9BTP6 218 aa17.82■□□□□ 0.44
TRAPPC9-213ENST00000522504 SUGCTQ9HAC7 445 aa17.82■□□□□ 0.44
TRAPPC9-213ENST00000522504 MRVI1Q9Y6F6 885 aa17.82■□□□□ 0.44
TRAPPC9-213ENST00000522504 COL4A4P53420 1690 aaPredicted RBP17.82■□□□□ 0.44
TRAPPC9-213ENST00000522504 LINC01553A4QN01 128 aa17.81■□□□□ 0.44
TRAPPC9-213ENST00000522504 DHX16O60231 1041 aaKnown RBP17.81■□□□□ 0.44
TRAPPC9-213ENST00000522504 GJB5O95377 273 aa17.81■□□□□ 0.44
TRAPPC9-213ENST00000522504 PARP1P09874 1014 aaKnown RBP17.81■□□□□ 0.44
TRAPPC9-213ENST00000522504 HOXD8P13378 290 aaPredicted RBP17.81■□□□□ 0.44
TRAPPC9-213ENST00000522504 HSD17B4P51659 736 aa17.81■□□□□ 0.44
TRAPPC9-213ENST00000522504 MFAP1P55081 439 aaKnown RBP17.81■□□□□ 0.44
TRAPPC9-213ENST00000522504 SP2Q02086 613 aa17.81■□□□□ 0.44
TRAPPC9-213ENST00000522504 PTK7Q13308 1070 aa17.81■□□□□ 0.44
TRAPPC9-213ENST00000522504 LAMC2Q13753 1193 aa17.81■□□□□ 0.44
TRAPPC9-213ENST00000522504 CCDC178Q5BJE1 867 aa17.81■□□□□ 0.44
TRAPPC9-213ENST00000522504 FAM117BQ6P1L5 589 aa17.81■□□□□ 0.44
TRAPPC9-213ENST00000522504 IL31RAQ8NI17 732 aa17.81■□□□□ 0.44
TRAPPC9-213ENST00000522504 C1QTNF1Q9BXJ1 281 aa17.81■□□□□ 0.44
TRAPPC9-213ENST00000522504 IL25Q9H293 177 aa17.81■□□□□ 0.44
TRAPPC9-213ENST00000522504 ABHD14A-ACY1A0A1B0GW23 586 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms