RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 GCOM1H8Y6P7 765 aaPredicted RBP23.98■■□□□ 1.43
SDCBP-209ENST00000522243 SUPT20HL2P0C7V6 817 aa23.98■■□□□ 1.43
SDCBP-209ENST00000522243 POLR2MP0CAP2 368 aa23.98■■□□□ 1.43
SDCBP-209ENST00000522243 MCM5P33992 734 aa23.98■■□□□ 1.43
SDCBP-209ENST00000522243 PGM5Q15124 567 aa23.98■■□□□ 1.43
SDCBP-209ENST00000522243 NECTIN1Q15223 517 aa23.98■■□□□ 1.43
SDCBP-209ENST00000522243 BMP2KLQ5H9B9 411 aa23.98■■□□□ 1.43
SDCBP-209ENST00000522243 IL31RAQ8NI17 732 aa23.98■■□□□ 1.43
SDCBP-209ENST00000522243 CTCFLQ8NI51 663 aaPredicted RBP23.98■■□□□ 1.43
SDCBP-209ENST00000522243 SH2B2O14492 632 aaPredicted RBP23.97■■□□□ 1.43
SDCBP-209ENST00000522243 SORBS3O60504 671 aa23.97■■□□□ 1.43
SDCBP-209ENST00000522243 DDAH1O94760 285 aa23.97■■□□□ 1.43
SDCBP-209ENST00000522243 FGBP02675 491 aa23.97■■□□□ 1.43
SDCBP-209ENST00000522243 RXRAP19793 462 aa23.97■■□□□ 1.43
SDCBP-209ENST00000522243 TRAF1Q13077 416 aa23.97■■□□□ 1.43
SDCBP-209ENST00000522243 RAB11FIP4Q86YS3 637 aa23.97■■□□□ 1.43
SDCBP-209ENST00000522243 LRRC2Q9BYS8 371 aa23.97■■□□□ 1.43
SDCBP-209ENST00000522243 CCDC69A6NI79 296 aa23.96■■□□□ 1.43
SDCBP-209ENST00000522243 RGS20O76081 388 aa23.96■■□□□ 1.43
SDCBP-209ENST00000522243 DNAJB2P25686 324 aa23.96■■□□□ 1.43
SDCBP-209ENST00000522243 RASIP1Q5U651 963 aa23.96■■□□□ 1.43
SDCBP-209ENST00000522243 NFRKBQ6P4R8 1299 aa23.96■■□□□ 1.43
SDCBP-209ENST00000522243 OTOP2Q7RTS6 562 aa23.96■■□□□ 1.43
SDCBP-209ENST00000522243 SAMD3Q8N6K7 520 aa23.96■■□□□ 1.43
SDCBP-209ENST00000522243 MYLIPQ8WY64 445 aa23.96■■□□□ 1.43
SDCBP-209ENST00000522243 TMEM87BQ96K49 555 aa23.96■■□□□ 1.43
SDCBP-209ENST00000522243 CXXC1Q9P0U4 656 aaPredicted RBP23.96■■□□□ 1.43
SDCBP-209ENST00000522243 SCN5AQ14524 2016 aa23.96■■□□□ 1.43
SDCBP-209ENST00000522243 PLEKHA8P1O95397 391 aa23.95■■□□□ 1.42
SDCBP-209ENST00000522243 KIF5BP33176 963 aa23.95■■□□□ 1.42
SDCBP-209ENST00000522243 PBX2P40425 430 aa23.95■■□□□ 1.42
SDCBP-209ENST00000522243 VSIG10LQ86VR7 867 aa23.95■■□□□ 1.42
SDCBP-209ENST00000522243 CMTR1Q8N1G2 835 aaKnown RBP23.95■■□□□ 1.42
SDCBP-209ENST00000522243 HERVK_113Q902F9 699 aa23.95■■□□□ 1.42
SDCBP-209ENST00000522243 MAP3K14Q99558 947 aa23.95■■□□□ 1.42
SDCBP-209ENST00000522243 MTA3Q9BTC8 594 aa23.95■■□□□ 1.42
SDCBP-209ENST00000522243 CASTP20810 708 aaKnown RBP23.94■■□□□ 1.42
SDCBP-209ENST00000522243 PTPN11Q06124 597 aaPredicted RBP23.94■■□□□ 1.42
SDCBP-209ENST00000522243 DHX37Q8IY37 1157 aaKnown RBP23.94■■□□□ 1.42
SDCBP-209ENST00000522243 KAT2BQ92831 832 aa23.94■■□□□ 1.42
SDCBP-209ENST00000522243 RRP36Q96EU6 259 aaKnown RBP23.94■■□□□ 1.42
SDCBP-209ENST00000522243 SPZ1Q9BXG8 430 aa23.94■■□□□ 1.42
SDCBP-209ENST00000522243 CCND2P30279 289 aa23.93■■□□□ 1.42
SDCBP-209ENST00000522243 LAMC2Q13753 1193 aa23.93■■□□□ 1.42
SDCBP-209ENST00000522243 DGKDQ16760 1214 aa23.93■■□□□ 1.42
SDCBP-209ENST00000522243 DEFB128Q7Z7B8 93 aa23.93■■□□□ 1.42
SDCBP-209ENST00000522243 RPUSD2Q8IZ73 545 aaKnown RBP23.93■■□□□ 1.42
SDCBP-209ENST00000522243 TMTC2Q8N394 836 aa23.93■■□□□ 1.42
SDCBP-209ENST00000522243 SRBD1Q8N5C6 995 aaKnown RBP23.93■■□□□ 1.42
SDCBP-209ENST00000522243 GPKOWQ92917 476 aaPredicted RBP eCLIP23.93■■□□□ 1.42
SDCBP-209ENST00000522243 TIFAQ96CG3 184 aa23.93■■□□□ 1.42
SDCBP-209ENST00000522243 VWCEQ96DN2 955 aa23.93■■□□□ 1.42
SDCBP-209ENST00000522243 PBX4Q9BYU1 374 aa23.93■■□□□ 1.42
SDCBP-209ENST00000522243 NOD1Q9Y239 953 aa23.93■■□□□ 1.42
SDCBP-209ENST00000522243 GBF1Q92538 1859 aa23.93■■□□□ 1.42
SDCBP-209ENST00000522243 TMEM265A0A087WTH1 108 aa23.92■■□□□ 1.42
SDCBP-209ENST00000522243 SP2Q02086 613 aa23.92■■□□□ 1.42
SDCBP-209ENST00000522243 EMID1Q96A84 441 aaPredicted RBP23.92■■□□□ 1.42
SDCBP-209ENST00000522243 ALG1Q9BT22 464 aa23.92■■□□□ 1.42
SDCBP-209ENST00000522243 MTIF3Q9H2K0 278 aaKnown RBP23.92■■□□□ 1.42
SDCBP-209ENST00000522243 GGPS1O95749 300 aa23.91■■□□□ 1.42
SDCBP-209ENST00000522243 ZNF286BP0CG31 522 aa23.91■■□□□ 1.42
SDCBP-209ENST00000522243 LIFRP42702 1097 aa23.91■■□□□ 1.42
SDCBP-209ENST00000522243 GNAQP50148 359 aa23.91■■□□□ 1.42
SDCBP-209ENST00000522243 GRIN2CQ14957 1233 aa23.91■■□□□ 1.42
SDCBP-209ENST00000522243 PTGISQ16647 500 aa23.91■■□□□ 1.42
SDCBP-209ENST00000522243 GDF6Q6KF10 455 aaPredicted RBP23.91■■□□□ 1.42
SDCBP-209ENST00000522243 LZTS2Q9BRK4 669 aa23.91■■□□□ 1.42
SDCBP-209ENST00000522243 ZNF576Q9H609 170 aa23.91■■□□□ 1.42
SDCBP-209ENST00000522243 SEC63Q9UGP8 760 aaKnown RBP23.91■■□□□ 1.42
SDCBP-209ENST00000522243 SLC12A7Q9Y666 1083 aa23.91■■□□□ 1.42
SDCBP-209ENST00000522243 TRIP12Q14669 1992 aaPredicted RBP23.91■■□□□ 1.42
SDCBP-209ENST00000522243 ZBBXA8MT70 800 aa23.9■■□□□ 1.42
SDCBP-209ENST00000522243 SMARCA1P28370 1054 aa23.9■■□□□ 1.42
SDCBP-209ENST00000522243 PSEN2P49810 448 aa23.9■■□□□ 1.42
SDCBP-209ENST00000522243 CELF3Q5SZQ8 465 aaKnown RBP23.9■■□□□ 1.42
SDCBP-209ENST00000522243 RNF20Q5VTR2 975 aa23.9■■□□□ 1.42
SDCBP-209ENST00000522243 MYSM1Q5VVJ2 828 aa23.9■■□□□ 1.42
SDCBP-209ENST00000522243 KCNV1Q6PIU1 500 aa23.9■■□□□ 1.42
SDCBP-209ENST00000522243 USP17L6PQ6QN14 398 aa23.9■■□□□ 1.42
SDCBP-209ENST00000522243 CCDC82Q8N4S0 544 aa23.9■■□□□ 1.42
SDCBP-209ENST00000522243 RETREG2Q8NC44 543 aa23.9■■□□□ 1.42
SDCBP-209ENST00000522243 PPTC7Q8NI37 304 aa23.9■■□□□ 1.42
SDCBP-209ENST00000522243 SMARCC2Q8TAQ2 1214 aa23.9■■□□□ 1.42
SDCBP-209ENST00000522243 RTEL1Q9NZ71 1219 aa23.9■■□□□ 1.42
SDCBP-209ENST00000522243 HDAC6Q9UBN7 1215 aa23.9■■□□□ 1.42
SDCBP-209ENST00000522243 hCG_1642624A0A1W2PR95 340 aa23.89■■□□□ 1.41
SDCBP-209ENST00000522243 CDC45O75419 566 aa23.89■■□□□ 1.41
SDCBP-209ENST00000522243 IQCF3P0C7M6 154 aa23.89■■□□□ 1.41
SDCBP-209ENST00000522243 CALM1P0DP23 149 aa23.89■■□□□ 1.41
SDCBP-209ENST00000522243 CALM2P0DP24 149 aa23.89■■□□□ 1.41
SDCBP-209ENST00000522243 CALM3P0DP25 149 aa23.89■■□□□ 1.41
SDCBP-209ENST00000522243 UBA1P22314 1058 aaKnown RBP23.89■■□□□ 1.41
SDCBP-209ENST00000522243 MRPS9P82933 396 aaKnown RBP23.89■■□□□ 1.41
SDCBP-209ENST00000522243 HSDL1Q3SXM5 330 aa23.89■■□□□ 1.41
SDCBP-209ENST00000522243 CUL5Q93034 780 aa23.89■■□□□ 1.41
SDCBP-209ENST00000522243 TCEANC2Q96MN5 208 aa23.89■■□□□ 1.41
SDCBP-209ENST00000522243 SPATA33Q96N06 139 aa23.89■■□□□ 1.41
SDCBP-209ENST00000522243 NEK1Q96PY6 1258 aa23.89■■□□□ 1.41
SDCBP-209ENST00000522243 BCAS3Q9H6U6 928 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms