RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 STK17AQ9UEE5 414 aa15.11■□□□□ 0.01
SYNPO-205ENST00000522122 FAM208AQ9UK61 1670 aaKnown RBP15.11■□□□□ 0.01
SYNPO-205ENST00000522122 A0A0G2JLW4 131 aa15.11■□□□□ 0.01
SYNPO-205ENST00000522122 NBPF26B4DH59 902 aa15.11■□□□□ 0.01
SYNPO-205ENST00000522122 ZMYND10O75800 440 aa15.11■□□□□ 0.01
SYNPO-205ENST00000522122 TBC1D8O95759 1140 aa15.11■□□□□ 0.01
SYNPO-205ENST00000522122 NR2F2P24468 414 aa15.11■□□□□ 0.01
SYNPO-205ENST00000522122 ZNF131P52739 623 aa15.11■□□□□ 0.01
SYNPO-205ENST00000522122 NBPF10Q6P3W6 841 aaKnown RBP15.11■□□□□ 0.01
SYNPO-205ENST00000522122 NBPF15Q8N660 670 aa15.11■□□□□ 0.01
SYNPO-205ENST00000522122 MGARPQ8TDB4 240 aa15.11■□□□□ 0.01
SYNPO-205ENST00000522122 NHEJ1Q9H9Q4 299 aaPredicted RBP15.11■□□□□ 0.01
SYNPO-205ENST00000522122 LEMD3Q9Y2U8 911 aa15.11■□□□□ 0.01
SYNPO-205ENST00000522122 NDC80O14777 642 aa15.11■□□□□ 0.01
SYNPO-205ENST00000522122 SLC8A3P57103 927 aa15.11■□□□□ 0.01
SYNPO-205ENST00000522122 ICA1Q05084 483 aa15.11■□□□□ 0.01
SYNPO-205ENST00000522122 FMR1Q06787 632 aaKnown RBP eCLIP15.11■□□□□ 0.01
SYNPO-205ENST00000522122 SCARF1Q14162 830 aa15.11■□□□□ 0.01
SYNPO-205ENST00000522122 LGSNQ5TDP6 509 aa15.11■□□□□ 0.01
SYNPO-205ENST00000522122 OTUD6AQ7L8S5 288 aa15.11■□□□□ 0.01
SYNPO-205ENST00000522122 SETD1BQ9UPS6 1966 aaKnown RBP15.11■□□□□ 0.01
SYNPO-205ENST00000522122 GYS2P54840 703 aa15.1■□□□□ 0.01
SYNPO-205ENST00000522122 ADAT2Q7Z6V5 191 aaKnown RBP15.1■□□□□ 0.01
SYNPO-205ENST00000522122 CDAN1Q8IWY9 1227 aa15.1■□□□□ 0.01
SYNPO-205ENST00000522122 TC2NQ8N9U0 490 aa15.1■□□□□ 0.01
SYNPO-205ENST00000522122 CCDC17Q96LX7 622 aa15.1■□□□□ 0.01
SYNPO-205ENST00000522122 MRPL11Q9Y3B7 192 aaKnown RBP15.1■□□□□ 0.01
SYNPO-205ENST00000522122 PXDNQ92626 1479 aa15.1■□□□□ 0.01
SYNPO-205ENST00000522122 TEX33O43247 280 aa15.1■□□□□ 0.01
SYNPO-205ENST00000522122 C2orf54Q08AI8 447 aa15.1■□□□□ 0.01
SYNPO-205ENST00000522122 KCTD16Q68DU8 428 aa15.1■□□□□ 0.01
SYNPO-205ENST00000522122 REXO1L1PQ8IX06 675 aa15.1■□□□□ 0.01
SYNPO-205ENST00000522122 LMNTD2Q8IXW0 634 aa15.1■□□□□ 0.01
SYNPO-205ENST00000522122 ZNF512BQ96KM6 892 aaPredicted RBP15.1■□□□□ 0.01
SYNPO-205ENST00000522122 VPS37BQ9H9H4 285 aa15.1■□□□□ 0.01
SYNPO-205ENST00000522122 ITIH6Q6UXX5 1313 aa15.1■□□□□ 0.01
SYNPO-205ENST00000522122 POLR2MP0CAP2 368 aa15.1■□□□□ 0.01
SYNPO-205ENST00000522122 CCT5P48643 541 aa15.1■□□□□ 0.01
SYNPO-205ENST00000522122 LIG3P49916 1009 aa15.1■□□□□ 0.01
SYNPO-205ENST00000522122 SCNN1DP51172 638 aa15.1■□□□□ 0.01
SYNPO-205ENST00000522122 SUPT20HQ8NEM7 779 aa15.1■□□□□ 0.01
SYNPO-205ENST00000522122 ARHGEF2Q92974 986 aaKnown RBP15.1■□□□□ 0.01
SYNPO-205ENST00000522122 NOP56O00567 594 aaKnown RBP15.1■□□□□ 0.01
SYNPO-205ENST00000522122 IFNB1P01574 187 aa15.1■□□□□ 0.01
SYNPO-205ENST00000522122 GBP1P32455 592 aa15.1■□□□□ 0.01
SYNPO-205ENST00000522122 HSPA1LP34931 641 aa15.1■□□□□ 0.01
SYNPO-205ENST00000522122 NR1I3Q14994 352 aa15.1■□□□□ 0.01
SYNPO-205ENST00000522122 LRRC41Q15345 812 aa15.1■□□□□ 0.01
SYNPO-205ENST00000522122 FBXL16Q8N461 479 aa15.1■□□□□ 0.01
SYNPO-205ENST00000522122 RABGAP1Q9Y3P9 1069 aa15.1■□□□□ 0.01
SYNPO-205ENST00000522122 JRKLQ9Y4A0 524 aa15.1■□□□□ 0.01
SYNPO-205ENST00000522122 CLNS1AP54105 237 aaKnown RBP15.09■□□□□ 0.01
SYNPO-205ENST00000522122 SNX16P57768 344 aa15.09■□□□□ 0.01
SYNPO-205ENST00000522122 PPM1KQ8N3J5 372 aa15.09■□□□□ 0.01
SYNPO-205ENST00000522122 AMNQ9BXJ7 453 aa15.09■□□□□ 0.01
SYNPO-205ENST00000522122 PEAK1Q9H792 1746 aa15.09■□□□□ 0.01
SYNPO-205ENST00000522122 CYP2D7A0A087X1C5 515 aa15.09■□□□□ 0.01
SYNPO-205ENST00000522122 K7ENM7 598 aa15.09■□□□□ 0.01
SYNPO-205ENST00000522122 GCFC2P16383 781 aaKnown RBP15.09■□□□□ 0.01
SYNPO-205ENST00000522122 PSMC4P43686 418 aa15.09■□□□□ 0.01
SYNPO-205ENST00000522122 ITIH3Q06033 890 aa15.09■□□□□ 0.01
SYNPO-205ENST00000522122 PABPC4Q13310 644 aaKnown RBP eCLIP15.09■□□□□ 0.01
SYNPO-205ENST00000522122 CUL4BQ13620 913 aa15.09■□□□□ 0.01
SYNPO-205ENST00000522122 CCDC62Q6P9F0 684 aa15.09■□□□□ 0.01
SYNPO-205ENST00000522122 TMTC3Q6ZXV5 915 aa15.09■□□□□ 0.01
SYNPO-205ENST00000522122 RNF14Q9UBS8 474 aa15.09■□□□□ 0.01
SYNPO-205ENST00000522122 FHOD1Q9Y613 1164 aa15.09■□□□□ 0.01
SYNPO-205ENST00000522122 XDHP47989 1333 aa15.09■□□□□ 0.01
SYNPO-205ENST00000522122 LGALS16A8MUM7 142 aa15.09■□□□□ 0.01
SYNPO-205ENST00000522122 HEXIM1O94992 359 aaKnown RBP15.09■□□□□ 0.01
SYNPO-205ENST00000522122 ANKRD20A3Q5VUR7 823 aa15.09■□□□□ 0.01
SYNPO-205ENST00000522122 NAA35Q5VZE5 725 aa15.09■□□□□ 0.01
SYNPO-205ENST00000522122 KIAA0825Q8IV33 1275 aa15.09■□□□□ 0.01
SYNPO-205ENST00000522122 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.09■□□□□ 0.01
SYNPO-205ENST00000522122 SH3GLB2Q9NR46 395 aa15.09■□□□□ 0.01
SYNPO-205ENST00000522122 SALL1Q9NSC2 1324 aa15.09■□□□□ 0.01
SYNPO-205ENST00000522122 PLEKHA8P1O95397 391 aa15.09■□□□□ 0.01
SYNPO-205ENST00000522122 VPS41P49754 854 aa15.09■□□□□ 0.01
SYNPO-205ENST00000522122 P3H4Q92791 437 aa15.09■□□□□ 0.01
SYNPO-205ENST00000522122 AZI2Q9H6S1 392 aa15.09■□□□□ 0.01
SYNPO-205ENST00000522122 EPB41L5Q9HCM4 733 aa15.09■□□□□ 0.01
SYNPO-205ENST00000522122 MYO1CO00159 1063 aa15.08■□□□□ 0.01
SYNPO-205ENST00000522122 ADCY8P40145 1251 aa15.08■□□□□ 0.01
SYNPO-205ENST00000522122 ARHGAP24Q8N264 748 aa15.08■□□□□ 0.01
SYNPO-205ENST00000522122 CCDC89Q8N998 374 aa15.08■□□□□ 0.01
SYNPO-205ENST00000522122 TTC16Q8NEE8 873 aa15.08■□□□□ 0.01
SYNPO-205ENST00000522122 IGDCC4Q8TDY8 1250 aa15.08■□□□□ 0.01
SYNPO-205ENST00000522122 DISC1Q9NRI5 854 aa15.08■□□□□ 0.01
SYNPO-205ENST00000522122 ANAPC4Q9UJX5 808 aa15.08■□□□□ 0.01
SYNPO-205ENST00000522122 ODR4Q5SWX8 454 aa15.08■□□□□ 0
SYNPO-205ENST00000522122 RASGRP2Q7LDG7 609 aa15.08■□□□□ 0
SYNPO-205ENST00000522122 GRK7Q8WTQ7 553 aa15.08■□□□□ 0
SYNPO-205ENST00000522122 KLHL14Q9P2G3 628 aa15.08■□□□□ 0
SYNPO-205ENST00000522122 FMN2Q9NZ56 1722 aa15.08■□□□□ 0
SYNPO-205ENST00000522122 CYP27A1Q02318 531 aa15.08■□□□□ 0
SYNPO-205ENST00000522122 FAM102BQ5T8I3 360 aa15.08■□□□□ 0
SYNPO-205ENST00000522122 BRIP1Q9BX63 1249 aa15.08■□□□□ 0
SYNPO-205ENST00000522122 EFCC1Q9HA90 598 aa15.08■□□□□ 0
SYNPO-205ENST00000522122 HPSEQ9Y251 543 aa15.08■□□□□ 0
SYNPO-205ENST00000522122 ANO9A1A5B4 782 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms