RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 ZSCAN31Q96LW9 406 aaPredicted RBP10.87□□□□□ -0.67
CLK4-209ENST00000521621 C22orf23Q9BZE7 217 aa10.87□□□□□ -0.67
CLK4-209ENST00000521621 UBIAD1Q9Y5Z9 338 aa10.87□□□□□ -0.67
CLK4-209ENST00000521621 GH1P01241 217 aa10.87□□□□□ -0.67
CLK4-209ENST00000521621 RXRAP19793 462 aa10.87□□□□□ -0.67
CLK4-209ENST00000521621 LAMC2Q13753 1193 aa10.87□□□□□ -0.67
CLK4-209ENST00000521621 GNPTABQ3T906 1256 aa10.87□□□□□ -0.67
CLK4-209ENST00000521621 TRIM22Q8IYM9 498 aa10.87□□□□□ -0.67
CLK4-209ENST00000521621 DIS3LQ8TF46 1054 aaKnown RBP10.87□□□□□ -0.67
CLK4-209ENST00000521621 PURBQ96QR8 312 aaKnown RBP10.87□□□□□ -0.67
CLK4-209ENST00000521621 LLPHQ9BRT6 129 aaKnown RBP10.87□□□□□ -0.67
CLK4-209ENST00000521621 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.86□□□□□ -0.67
CLK4-209ENST00000521621 A0A1W2PQ45 241 aaPredicted RBP10.86□□□□□ -0.67
CLK4-209ENST00000521621 A0A1W2PQY0 241 aa10.86□□□□□ -0.67
CLK4-209ENST00000521621 FIBPO43427 364 aa10.86□□□□□ -0.67
CLK4-209ENST00000521621 RGS20O76081 388 aa10.86□□□□□ -0.67
CLK4-209ENST00000521621 BMP8BP34820 402 aa10.86□□□□□ -0.67
CLK4-209ENST00000521621 SREBF1P36956 1147 aa10.86□□□□□ -0.67
CLK4-209ENST00000521621 AK2P54819 239 aa10.86□□□□□ -0.67
CLK4-209ENST00000521621 SSRP1Q08945 709 aaKnown RBP10.86□□□□□ -0.67
CLK4-209ENST00000521621 RABEP1Q15276 862 aa10.86□□□□□ -0.67
CLK4-209ENST00000521621 BRDTQ58F21 947 aaPredicted RBP10.86□□□□□ -0.67
CLK4-209ENST00000521621 WASF1Q92558 559 aa10.86□□□□□ -0.67
CLK4-209ENST00000521621 C6orf50Q9HD87 102 aa10.86□□□□□ -0.67
CLK4-209ENST00000521621 TPCN1Q9ULQ1 816 aa10.86□□□□□ -0.67
CLK4-209ENST00000521621 ARHGAP1Q07960 439 aa10.86□□□□□ -0.67
CLK4-209ENST00000521621 FSCN1Q16658 493 aaKnown RBP10.86□□□□□ -0.67
CLK4-209ENST00000521621 HEATR3Q7Z4Q2 680 aa10.86□□□□□ -0.67
CLK4-209ENST00000521621 NLRX1Q86UT6 975 aa10.86□□□□□ -0.67
CLK4-209ENST00000521621 PPTC7Q8NI37 304 aa10.86□□□□□ -0.67
CLK4-209ENST00000521621 GTF3C6Q969F1 213 aa10.86□□□□□ -0.67
CLK4-209ENST00000521621 PRO3102Q9H379 93 aa10.86□□□□□ -0.67
CLK4-209ENST00000521621 PDGFCQ9NRA1 345 aa10.86□□□□□ -0.67
CLK4-209ENST00000521621 SCN10AQ9Y5Y9 1956 aa10.86□□□□□ -0.67
CLK4-209ENST00000521621 NFASCO94856 1347 aa10.85□□□□□ -0.67
CLK4-209ENST00000521621 A0A0U1RQG5 324 aaPredicted RBP10.85□□□□□ -0.67
CLK4-209ENST00000521621 M0R2N6 131 aa10.85□□□□□ -0.67
CLK4-209ENST00000521621 NAPAP54920 295 aa10.85□□□□□ -0.67
CLK4-209ENST00000521621 MRPS9P82933 396 aaKnown RBP10.85□□□□□ -0.67
CLK4-209ENST00000521621 KCNA10Q16322 511 aa10.85□□□□□ -0.67
CLK4-209ENST00000521621 TYW1BQ6NUM6 668 aa10.85□□□□□ -0.67
CLK4-209ENST00000521621 UPF3BQ9BZI7 483 aaKnown RBP10.85□□□□□ -0.67
CLK4-209ENST00000521621 SH2B1Q9NRF2 756 aaPredicted RBP10.85□□□□□ -0.67
CLK4-209ENST00000521621 PCDHA6Q9UN73 950 aa10.85□□□□□ -0.67
CLK4-209ENST00000521621 PCDHA8Q9Y5H6 950 aa10.85□□□□□ -0.67
CLK4-209ENST00000521621 SMCO2A6NFE2 343 aa10.85□□□□□ -0.67
CLK4-209ENST00000521621 SPDYE3A6NKU9 549 aa10.85□□□□□ -0.67
CLK4-209ENST00000521621 TXNP10599 105 aaKnown RBP10.85□□□□□ -0.67
CLK4-209ENST00000521621 CIITAP33076 1130 aa10.85□□□□□ -0.67
CLK4-209ENST00000521621 AKAP17AQ02040 695 aaKnown RBP10.85□□□□□ -0.67
CLK4-209ENST00000521621 SCRN1Q12765 414 aa10.85□□□□□ -0.67
CLK4-209ENST00000521621 NEDD9Q14511 834 aa10.85□□□□□ -0.67
CLK4-209ENST00000521621 GJC2Q5T442 439 aaPredicted RBP10.85□□□□□ -0.67
CLK4-209ENST00000521621 MOXD1Q6UVY6 613 aa10.85□□□□□ -0.67
CLK4-209ENST00000521621 SLKQ9H2G2 1235 aaPredicted RBP10.85□□□□□ -0.67
CLK4-209ENST00000521621 UPF2Q9HAU5 1272 aaKnown RBP10.85□□□□□ -0.67
CLK4-209ENST00000521621 EIF2AK2P19525 551 aaKnown RBP10.84□□□□□ -0.67
CLK4-209ENST00000521621 HOXA13P31271 388 aaPredicted RBP10.84□□□□□ -0.67
CLK4-209ENST00000521621 MCM2P49736 904 aa10.84□□□□□ -0.67
CLK4-209ENST00000521621 LRRC26Q2I0M4 334 aa10.84□□□□□ -0.67
CLK4-209ENST00000521621 CELF3Q5SZQ8 465 aaKnown RBP10.84□□□□□ -0.67
CLK4-209ENST00000521621 FAM43BQ6ZT52 329 aaPredicted RBP10.84□□□□□ -0.67
CLK4-209ENST00000521621 CMTR1Q8N1G2 835 aaKnown RBP10.84□□□□□ -0.67
CLK4-209ENST00000521621 TBC1D32Q96NH3 1257 aa10.84□□□□□ -0.67
CLK4-209ENST00000521621 JADE2Q9NQC1 790 aa10.84□□□□□ -0.67
CLK4-209ENST00000521621 LIMCH1Q9UPQ0 1083 aa10.84□□□□□ -0.67
CLK4-209ENST00000521621 KIAA0355O15063 1070 aa10.84□□□□□ -0.67
CLK4-209ENST00000521621 MYCP01106 439 aaPredicted RBP10.84□□□□□ -0.67
CLK4-209ENST00000521621 ASGR1P07306 291 aa10.84□□□□□ -0.67
CLK4-209ENST00000521621 PURAQ00577 322 aaKnown RBP10.84□□□□□ -0.67
CLK4-209ENST00000521621 NFRKBQ6P4R8 1299 aa10.84□□□□□ -0.67
CLK4-209ENST00000521621 OR6J1Q8NGC5 347 aa10.84□□□□□ -0.67
CLK4-209ENST00000521621 GLT1D1Q96MS3 346 aa10.84□□□□□ -0.67
CLK4-209ENST00000521621 MTG1Q9BT17 334 aaPredicted RBP10.84□□□□□ -0.67
CLK4-209ENST00000521621 ARVCFO00192 962 aa10.83□□□□□ -0.68
CLK4-209ENST00000521621 HAS3O00219 553 aa10.83□□□□□ -0.68
CLK4-209ENST00000521621 EVI5O60447 810 aa10.83□□□□□ -0.68
CLK4-209ENST00000521621 ARIH2O95376 493 aa10.83□□□□□ -0.68
CLK4-209ENST00000521621 PGK1P00558 417 aa10.83□□□□□ -0.68
CLK4-209ENST00000521621 CD4P01730 458 aa10.83□□□□□ -0.68
CLK4-209ENST00000521621 USP11P51784 963 aa10.83□□□□□ -0.68
CLK4-209ENST00000521621 MYSM1Q5VVJ2 828 aa10.83□□□□□ -0.68
CLK4-209ENST00000521621 USP17L6PQ6QN14 398 aa10.83□□□□□ -0.68
CLK4-209ENST00000521621 GPKOWQ92917 476 aaPredicted RBP eCLIP10.83□□□□□ -0.684e-6■■■■□ 25.6
CLK4-209ENST00000521621 PCDHA4Q9UN74 947 aa10.83□□□□□ -0.68
CLK4-209ENST00000521621 CYP3A7-CYP3A51PA0A087WV96 503 aa10.83□□□□□ -0.68
CLK4-209ENST00000521621 MYADML2A6NDP7 307 aa10.83□□□□□ -0.68
CLK4-209ENST00000521621 CPLX1O14810 134 aa10.83□□□□□ -0.68
CLK4-209ENST00000521621 PPFIA4O75335 1185 aa10.83□□□□□ -0.68
CLK4-209ENST00000521621 MMP3P08254 477 aa10.83□□□□□ -0.68
CLK4-209ENST00000521621 CYP3A7P24462 503 aa10.83□□□□□ -0.68
CLK4-209ENST00000521621 NEK4P51957 841 aa10.83□□□□□ -0.68
CLK4-209ENST00000521621 RTP1P59025 263 aa10.83□□□□□ -0.68
CLK4-209ENST00000521621 RBL2Q08999 1139 aa10.83□□□□□ -0.68
CLK4-209ENST00000521621 ME3Q16798 604 aa10.83□□□□□ -0.68
CLK4-209ENST00000521621 IL31RAQ8NI17 732 aa10.83□□□□□ -0.68
CLK4-209ENST00000521621 MBOAT7Q96N66 472 aa10.83□□□□□ -0.68
CLK4-209ENST00000521621 PHF20Q9BVI0 1012 aa10.83□□□□□ -0.68
CLK4-209ENST00000521621 ANO3Q9BYT9 981 aa10.83□□□□□ -0.68
CLK4-209ENST00000521621 BACH2Q9BYV9 841 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms