RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 NPLOC4Q8TAT6 608 aa4.93□□□□□ -1.62
VPS13B-209ENST00000521559 FRS2Q8WU20 508 aa4.93□□□□□ -1.62
VPS13B-209ENST00000521559 CPA5Q8WXQ8 436 aa4.93□□□□□ -1.62
VPS13B-209ENST00000521559 EPB41L4AQ9HCS5 686 aaPredicted RBP4.93□□□□□ -1.62
VPS13B-209ENST00000521559 MARCH2Q9P0N8 246 aa4.93□□□□□ -1.62
VPS13B-209ENST00000521559 KIAA0586Q9BVV6 1533 aa4.92□□□□□ -1.62
VPS13B-209ENST00000521559 C22orf46C9J442 243 aa4.92□□□□□ -1.62
VPS13B-209ENST00000521559 PPP1R11O60927 126 aaPredicted RBP4.92□□□□□ -1.62
VPS13B-209ENST00000521559 NTRK1P04629 796 aa4.92□□□□□ -1.62
VPS13B-209ENST00000521559 ASGR2P07307 311 aa4.92□□□□□ -1.62
VPS13B-209ENST00000521559 FBLN1P23142 703 aa4.92□□□□□ -1.62
VPS13B-209ENST00000521559 ZC3H6P61129 1189 aaKnown RBP4.92□□□□□ -1.62
VPS13B-209ENST00000521559 LILRA6Q6PI73 481 aa4.92□□□□□ -1.62
VPS13B-209ENST00000521559 B3GNT8Q7Z7M8 397 aa4.92□□□□□ -1.62
VPS13B-209ENST00000521559 SEC14L1Q92503 715 aa4.92□□□□□ -1.62
VPS13B-209ENST00000521559 IGSF5Q9NSI5 407 aa4.92□□□□□ -1.62
VPS13B-209ENST00000521559 BTG4Q9NY30 223 aa4.92□□□□□ -1.62
VPS13B-209ENST00000521559 COA3Q9Y2R0 106 aaPredicted RBP4.92□□□□□ -1.62
VPS13B-209ENST00000521559 HCFC2Q9Y5Z7 792 aa4.92□□□□□ -1.62
VPS13B-209ENST00000521559 PMF1-BGLAPU3KQ54 211 aa4.92□□□□□ -1.62
VPS13B-209ENST00000521559 LOC105371045A0A1W2PR82 267 aa4.91□□□□□ -1.62
VPS13B-209ENST00000521559 U2SURPO15042 1029 aaKnown RBP4.91□□□□□ -1.62
VPS13B-209ENST00000521559 PMLP29590 882 aa4.91□□□□□ -1.62
VPS13B-209ENST00000521559 LTBRP36941 435 aa4.91□□□□□ -1.62
VPS13B-209ENST00000521559 LIMS1P48059 325 aa4.91□□□□□ -1.62
VPS13B-209ENST00000521559 SLC6A11P48066 632 aa4.91□□□□□ -1.62
VPS13B-209ENST00000521559 CTSWP56202 376 aa4.91□□□□□ -1.62
VPS13B-209ENST00000521559 HSP90AA2PQ14568 343 aaPredicted RBP4.91□□□□□ -1.62
VPS13B-209ENST00000521559 TESK1Q15569 626 aa4.91□□□□□ -1.62
VPS13B-209ENST00000521559 CHRNA2Q15822 529 aa4.91□□□□□ -1.62
VPS13B-209ENST00000521559 DDR2Q16832 855 aa4.91□□□□□ -1.62
VPS13B-209ENST00000521559 ERICH6BQ5W0A0 696 aa4.91□□□□□ -1.62
VPS13B-209ENST00000521559 MRM1Q6IN84 353 aaKnown RBP4.91□□□□□ -1.62
VPS13B-209ENST00000521559 CEP68Q76N32 757 aa4.91□□□□□ -1.62
VPS13B-209ENST00000521559 NPM2Q86SE8 214 aaKnown RBP4.91□□□□□ -1.62
VPS13B-209ENST00000521559 RIOX2Q8IUF8 465 aa4.91□□□□□ -1.62
VPS13B-209ENST00000521559 PLEKHO2Q8TD55 490 aa4.91□□□□□ -1.62
VPS13B-209ENST00000521559 MICAL1Q8TDZ2 1067 aa4.91□□□□□ -1.62
VPS13B-209ENST00000521559 HNRNPLLQ8WVV9 542 aaKnown RBP4.91□□□□□ -1.62
VPS13B-209ENST00000521559 KCTD13Q8WZ19 329 aa4.91□□□□□ -1.62
VPS13B-209ENST00000521559 TRMT2BQ96GJ1 504 aaKnown RBP4.91□□□□□ -1.62
VPS13B-209ENST00000521559 TMEM169Q96HH4 297 aa4.91□□□□□ -1.62
VPS13B-209ENST00000521559 SGSM3Q96HU1 749 aa4.91□□□□□ -1.62
VPS13B-209ENST00000521559 KCNC2Q96PR1 638 aa4.91□□□□□ -1.62
VPS13B-209ENST00000521559 TRIM55Q9BYV6 548 aa4.91□□□□□ -1.62
VPS13B-209ENST00000521559 NGRNQ9NPE2 291 aaKnown RBP4.91□□□□□ -1.62
VPS13B-209ENST00000521559 LUC7LQ9NQ29 371 aaKnown RBP4.91□□□□□ -1.62
VPS13B-209ENST00000521559 CUL7Q14999 1698 aa4.91□□□□□ -1.62
VPS13B-209ENST00000521559 PBRM1Q86U86 1689 aa4.91□□□□□ -1.62
VPS13B-209ENST00000521559 H7BY64 318 aa4.9□□□□□ -1.63
VPS13B-209ENST00000521559 TRIM13O60858 407 aa4.9□□□□□ -1.63
VPS13B-209ENST00000521559 STK10O94804 968 aaKnown RBP4.9□□□□□ -1.63
VPS13B-209ENST00000521559 ATF2P15336 505 aa4.9□□□□□ -1.63
VPS13B-209ENST00000521559 HOXA5P20719 270 aa4.9□□□□□ -1.63
VPS13B-209ENST00000521559 GFRA1P56159 465 aa4.9□□□□□ -1.63
VPS13B-209ENST00000521559 CACNB2Q08289 660 aaPredicted RBP4.9□□□□□ -1.63
VPS13B-209ENST00000521559 MAP4K2Q12851 820 aa4.9□□□□□ -1.63
VPS13B-209ENST00000521559 INF2Q27J81 1249 aa4.9□□□□□ -1.63
VPS13B-209ENST00000521559 SLC10A6Q3KNW5 377 aa4.9□□□□□ -1.63
VPS13B-209ENST00000521559 LCE1DQ5T752 114 aa4.9□□□□□ -1.63
VPS13B-209ENST00000521559 MBLAC2Q68D91 279 aa4.9□□□□□ -1.63
VPS13B-209ENST00000521559 TEX2Q8IWB9 1127 aa4.9□□□□□ -1.63
VPS13B-209ENST00000521559 PPIL6Q8IXY8 311 aa4.9□□□□□ -1.63
VPS13B-209ENST00000521559 CKAP2LQ8IYA6 745 aa4.9□□□□□ -1.63
VPS13B-209ENST00000521559 ST13P5Q8NFI4 369 aaPredicted RBP4.9□□□□□ -1.63
VPS13B-209ENST00000521559 DPF3Q92784 378 aa4.9□□□□□ -1.63
VPS13B-209ENST00000521559 DDX11Q96FC9 970 aa4.9□□□□□ -1.63
VPS13B-209ENST00000521559 CHAMP1Q96JM3 812 aa4.9□□□□□ -1.63
VPS13B-209ENST00000521559 LGR4Q9BXB1 951 aa4.9□□□□□ -1.63
VPS13B-209ENST00000521559 RXFP1Q9HBX9 757 aa4.9□□□□□ -1.63
VPS13B-209ENST00000521559 ST7Q9NRC1 585 aa4.9□□□□□ -1.63
VPS13B-209ENST00000521559 FBLN5Q9UBX5 448 aa4.9□□□□□ -1.63
VPS13B-209ENST00000521559 PPP1R1BQ9UD71 204 aaPredicted RBP4.9□□□□□ -1.63
VPS13B-209ENST00000521559 X6R8D5 127 aa4.9□□□□□ -1.63
VPS13B-209ENST00000521559 GOLGA3Q08378 1498 aa4.89□□□□□ -1.63
VPS13B-209ENST00000521559 CLASP1Q7Z460 1538 aa4.89□□□□□ -1.63
VPS13B-209ENST00000521559 TBX1O43435 398 aa4.89□□□□□ -1.63
VPS13B-209ENST00000521559 KLF4O43474 513 aa4.89□□□□□ -1.63
VPS13B-209ENST00000521559 BCL6P41182 706 aa4.89□□□□□ -1.63
VPS13B-209ENST00000521559 PPP2R2AP63151 447 aa4.89□□□□□ -1.63
VPS13B-209ENST00000521559 CYP4F3Q08477 520 aa4.89□□□□□ -1.63
VPS13B-209ENST00000521559 LSAMPQ13449 338 aa4.89□□□□□ -1.63
VPS13B-209ENST00000521559 RAB33AQ14088 237 aa4.89□□□□□ -1.63
VPS13B-209ENST00000521559 ETV3LQ6ZN32 361 aa4.89□□□□□ -1.63
VPS13B-209ENST00000521559 DPH6Q7L8W6 267 aa4.89□□□□□ -1.63
VPS13B-209ENST00000521559 ZC3H18Q86VM9 953 aaKnown RBP4.89□□□□□ -1.63
VPS13B-209ENST00000521559 LRRC47Q8N1G4 583 aaKnown RBP4.89□□□□□ -1.63
VPS13B-209ENST00000521559 Q8N1Y9 231 aa4.89□□□□□ -1.63
VPS13B-209ENST00000521559 KREMEN2Q8NCW0 462 aa4.89□□□□□ -1.63
VPS13B-209ENST00000521559 FNIP1Q8TF40 1166 aa4.89□□□□□ -1.63
VPS13B-209ENST00000521559 CEP170Q5SW79 1584 aa4.89□□□□□ -1.63
VPS13B-209ENST00000521559 TNIKQ9UKE5 1360 aa4.89□□□□□ -1.63
VPS13B-209ENST00000521559 PRG4Q92954 1404 aaPredicted RBP4.89□□□□□ -1.63
VPS13B-209ENST00000521559 A0A1W2PQU0 124 aa4.88□□□□□ -1.63
VPS13B-209ENST00000521559 SMARCA5O60264 1052 aaPredicted RBP4.88□□□□□ -1.63
VPS13B-209ENST00000521559 MAFKO60675 156 aa4.88□□□□□ -1.63
VPS13B-209ENST00000521559 CYP2C8P10632 490 aa4.88□□□□□ -1.63
VPS13B-209ENST00000521559 KCNC1P48547 511 aa4.88□□□□□ -1.63
VPS13B-209ENST00000521559 VMACQ2NL98 169 aa4.88□□□□□ -1.63
VPS13B-209ENST00000521559 NAALADL2Q58DX5 795 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms