RNA–Protein interactions for RNA: ENST00000521167.1

TRAPPC9-209, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-209ENST00000521167 STARD7Q9NQZ5 370 aa12.05□□□□□ -0.48
TRAPPC9-209ENST00000521167 RBM27Q9P2N5 1060 aaKnown RBP12.05□□□□□ -0.48
TRAPPC9-209ENST00000521167 PRKAG2Q9UGJ0 569 aa12.05□□□□□ -0.48
TRAPPC9-209ENST00000521167 ATP11BQ9Y2G3 1177 aa12.05□□□□□ -0.48
TRAPPC9-209ENST00000521167 DDX49Q9Y6V7 483 aaKnown RBP12.05□□□□□ -0.48
TRAPPC9-209ENST00000521167 MYADML2A6NDP7 307 aa12.04□□□□□ -0.48
TRAPPC9-209ENST00000521167 OPLAHO14841 1288 aa12.04□□□□□ -0.48
TRAPPC9-209ENST00000521167 SYN1P17600 705 aa12.04□□□□□ -0.48
TRAPPC9-209ENST00000521167 TLE2Q04725 743 aa12.04□□□□□ -0.48
TRAPPC9-209ENST00000521167 COL9A3Q14050 684 aaPredicted RBP12.04□□□□□ -0.48
TRAPPC9-209ENST00000521167 STXBP2Q15833 593 aa12.04□□□□□ -0.48
TRAPPC9-209ENST00000521167 FSCN1Q16658 493 aaKnown RBP12.04□□□□□ -0.48
TRAPPC9-209ENST00000521167 ADCK5Q3MIX3 580 aa12.04□□□□□ -0.48
TRAPPC9-209ENST00000521167 TRIM60Q495X7 471 aa12.04□□□□□ -0.48
TRAPPC9-209ENST00000521167 ARHGEF16Q5VV41 709 aa12.04□□□□□ -0.48
TRAPPC9-209ENST00000521167 FANCBQ8NB91 859 aa12.04□□□□□ -0.48
TRAPPC9-209ENST00000521167 MYL10Q9BUA6 226 aa12.04□□□□□ -0.48
TRAPPC9-209ENST00000521167 LRRC2Q9BYS8 371 aa12.04□□□□□ -0.48
TRAPPC9-209ENST00000521167 GCOM1H8Y6P7 765 aaPredicted RBP12.03□□□□□ -0.48
TRAPPC9-209ENST00000521167 EIF3JO75822 258 aaKnown RBP12.03□□□□□ -0.48
TRAPPC9-209ENST00000521167 NR3C2P08235 984 aa12.03□□□□□ -0.48
TRAPPC9-209ENST00000521167 POLR2MP0CAP2 368 aa12.03□□□□□ -0.48
TRAPPC9-209ENST00000521167 MAGEA10P43363 369 aaPredicted RBP12.03□□□□□ -0.48
TRAPPC9-209ENST00000521167 CDK7P50613 346 aa12.03□□□□□ -0.48
TRAPPC9-209ENST00000521167 TTLL4Q14679 1199 aa12.03□□□□□ -0.48
TRAPPC9-209ENST00000521167 ANKRD33Q7Z3H0 272 aa12.03□□□□□ -0.48
TRAPPC9-209ENST00000521167 SRBD1Q8N5C6 995 aaKnown RBP12.03□□□□□ -0.48
TRAPPC9-209ENST00000521167 VTI1AQ96AJ9 217 aa12.03□□□□□ -0.48
TRAPPC9-209ENST00000521167 LBHD1Q9BQE6 289 aaPredicted RBP12.03□□□□□ -0.48
TRAPPC9-209ENST00000521167 PXMP2Q9NR77 195 aa12.03□□□□□ -0.48
TRAPPC9-209ENST00000521167 COL20A1Q9P218 1284 aa12.03□□□□□ -0.48
TRAPPC9-209ENST00000521167 SEC63Q9UGP8 760 aaKnown RBP12.03□□□□□ -0.48
TRAPPC9-209ENST00000521167 MROH7Q68CQ1 1323 aa12.03□□□□□ -0.48
TRAPPC9-209ENST00000521167 SCN10AQ9Y5Y9 1956 aa12.02□□□□□ -0.49
TRAPPC9-209ENST00000521167 A0A0U1RQG5 324 aaPredicted RBP12.02□□□□□ -0.49
TRAPPC9-209ENST00000521167 DCDC2CA8MYV0 355 aa12.02□□□□□ -0.49
TRAPPC9-209ENST00000521167 ARVCFO00192 962 aa12.02□□□□□ -0.49
TRAPPC9-209ENST00000521167 PLEKHA8P1O95397 391 aa12.02□□□□□ -0.49
TRAPPC9-209ENST00000521167 TXNP10599 105 aaKnown RBP12.02□□□□□ -0.49
TRAPPC9-209ENST00000521167 PSMA5P28066 241 aa12.02□□□□□ -0.49
TRAPPC9-209ENST00000521167 CPT1AP50416 773 aa12.02□□□□□ -0.49
TRAPPC9-209ENST00000521167 RCAN1P53805 252 aa12.02□□□□□ -0.49
TRAPPC9-209ENST00000521167 BEX3Q00994 111 aa12.02□□□□□ -0.49
TRAPPC9-209ENST00000521167 PPP2R5BQ15173 497 aa12.02□□□□□ -0.49
TRAPPC9-209ENST00000521167 BRDTQ58F21 947 aaPredicted RBP12.02□□□□□ -0.49
TRAPPC9-209ENST00000521167 ARSIQ5FYB1 569 aa12.02□□□□□ -0.49
TRAPPC9-209ENST00000521167 APOA5Q6Q788 366 aa12.02□□□□□ -0.49
TRAPPC9-209ENST00000521167 TMTC3Q6ZXV5 915 aa12.02□□□□□ -0.49
TRAPPC9-209ENST00000521167 FBXL16Q8N461 479 aa12.02□□□□□ -0.49
TRAPPC9-209ENST00000521167 KRTAP3-3Q9BYR6 98 aa12.02□□□□□ -0.49
TRAPPC9-209ENST00000521167 KRTAP3-2Q9BYR7 98 aa12.02□□□□□ -0.49
TRAPPC9-209ENST00000521167 POLR3EQ9NVU0 708 aa12.02□□□□□ -0.49
TRAPPC9-209ENST00000521167 RBM28Q9NW13 759 aaKnown RBP12.02□□□□□ -0.49
TRAPPC9-209ENST00000521167 SNX14Q9Y5W7 946 aa12.02□□□□□ -0.49
TRAPPC9-209ENST00000521167 LTBP2Q14767 1821 aa12.02□□□□□ -0.49
TRAPPC9-209ENST00000521167 KIAA0355O15063 1070 aa12.01□□□□□ -0.49
TRAPPC9-209ENST00000521167 ZBTB43O43298 467 aa12.01□□□□□ -0.49
TRAPPC9-209ENST00000521167 GTPBP6O43824 516 aaPredicted RBP12.01□□□□□ -0.49
TRAPPC9-209ENST00000521167 KPNA6O60684 536 aa12.01□□□□□ -0.49
TRAPPC9-209ENST00000521167 CLTBP09497 229 aa12.01□□□□□ -0.49
TRAPPC9-209ENST00000521167 EIF2AK2P19525 551 aaKnown RBP12.01□□□□□ -0.49
TRAPPC9-209ENST00000521167 RXRAP19793 462 aa12.01□□□□□ -0.49
TRAPPC9-209ENST00000521167 TMEM63BQ5T3F8 832 aa12.01□□□□□ -0.49
TRAPPC9-209ENST00000521167 CCDC62Q6P9F0 684 aa12.01□□□□□ -0.49
TRAPPC9-209ENST00000521167 KCNV1Q6PIU1 500 aa12.01□□□□□ -0.49
TRAPPC9-209ENST00000521167 BLOC1S2Q6QNY1 142 aa12.01□□□□□ -0.49
TRAPPC9-209ENST00000521167 VSIG10LQ86VR7 867 aa12.01□□□□□ -0.49
TRAPPC9-209ENST00000521167 MICU3Q86XE3 530 aa12.01□□□□□ -0.49
TRAPPC9-209ENST00000521167 SLC43A3Q8NBI5 491 aa12.01□□□□□ -0.49
TRAPPC9-209ENST00000521167 OR6J1Q8NGC5 347 aa12.01□□□□□ -0.49
TRAPPC9-209ENST00000521167 JAKMIP1Q96N16 626 aaKnown RBP12.01□□□□□ -0.49
TRAPPC9-209ENST00000521167 PDCD2LQ9BRP1 358 aa12.01□□□□□ -0.49
TRAPPC9-209ENST00000521167 USP26Q9BXU7 913 aa12.01□□□□□ -0.49
TRAPPC9-209ENST00000521167 UBE2OQ9C0C9 1292 aaKnown RBP12.01□□□□□ -0.49
TRAPPC9-209ENST00000521167 PDLIM7Q9NR12 457 aa12.01□□□□□ -0.49
TRAPPC9-209ENST00000521167 A6NJR5 290 aa12□□□□□ -0.49
TRAPPC9-209ENST00000521167 TLR3O15455 904 aaKnown RBP12□□□□□ -0.49
TRAPPC9-209ENST00000521167 PQBP1O60828 265 aaKnown RBP12□□□□□ -0.49
TRAPPC9-209ENST00000521167 HOXA13P31271 388 aaPredicted RBP12□□□□□ -0.49
TRAPPC9-209ENST00000521167 FXR1P51114 621 aaKnown RBP eCLIP12□□□□□ -0.49
TRAPPC9-209ENST00000521167 FGD1P98174 961 aa12□□□□□ -0.49
TRAPPC9-209ENST00000521167 MDM2Q00987 491 aaPredicted RBP12□□□□□ -0.49
TRAPPC9-209ENST00000521167 CXCL17Q6UXB2 119 aa12□□□□□ -0.49
TRAPPC9-209ENST00000521167 SEPT14Q6ZU15 432 aa12□□□□□ -0.49
TRAPPC9-209ENST00000521167 TEX2Q8IWB9 1127 aa12□□□□□ -0.49
TRAPPC9-209ENST00000521167 PIBF1Q8WXW3 757 aa12□□□□□ -0.49
TRAPPC9-209ENST00000521167 CUL5Q93034 780 aa12□□□□□ -0.49
TRAPPC9-209ENST00000521167 TCEANC2Q96MN5 208 aa12□□□□□ -0.49
TRAPPC9-209ENST00000521167 PRDM5Q9NQX1 630 aaPredicted RBP12□□□□□ -0.49
TRAPPC9-209ENST00000521167 TMEM39AQ9NV64 488 aa12□□□□□ -0.49
TRAPPC9-209ENST00000521167 DDX41Q9UJV9 622 aaKnown RBP12□□□□□ -0.49
TRAPPC9-209ENST00000521167 BRPF3Q9ULD4 1205 aa12□□□□□ -0.49
TRAPPC9-209ENST00000521167 KAT6AQ92794 2004 aa11.99□□□□□ -0.49
TRAPPC9-209ENST00000521167 RANBP2P49792 3224 aaKnown RBP11.99□□□□□ -0.49
TRAPPC9-209ENST00000521167 KLF18A0A0U1RQI7 1052 aa11.99□□□□□ -0.49
TRAPPC9-209ENST00000521167 CCDC196A0A1B0GTZ2 297 aa11.99□□□□□ -0.49
TRAPPC9-209ENST00000521167 TRIM43BA6NCK2 446 aa11.99□□□□□ -0.49
TRAPPC9-209ENST00000521167 PIK3CDO00329 1044 aa11.99□□□□□ -0.49
TRAPPC9-209ENST00000521167 EIF5BO60841 1220 aaKnown RBP11.99□□□□□ -0.49
TRAPPC9-209ENST00000521167 STAM2O75886 525 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms