RNA–Protein interactions for RNA: ENST00000521067.1

PABPC1-217, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-217ENST00000521067 ARHGEF16Q5VV41 709 aa23.64■■□□□ 1.37
PABPC1-217ENST00000521067 GDF6Q6KF10 455 aaPredicted RBP23.64■■□□□ 1.37
PABPC1-217ENST00000521067 PXMP2Q9NR77 195 aa23.64■■□□□ 1.37
PABPC1-217ENST00000521067 TAF6LQ9Y6J9 622 aa23.64■■□□□ 1.37
PABPC1-217ENST00000521067 SCN5AQ14524 2016 aa23.64■■□□□ 1.37
PABPC1-217ENST00000521067 PALM3A6NDB9 673 aaPredicted RBP23.63■■□□□ 1.37
PABPC1-217ENST00000521067 EIF3JO75822 258 aaKnown RBP23.63■■□□□ 1.37
PABPC1-217ENST00000521067 HSD17B4P51659 736 aa23.63■■□□□ 1.37
PABPC1-217ENST00000521067 GHRHRQ02643 423 aa23.63■■□□□ 1.37
PABPC1-217ENST00000521067 PTH1RQ03431 593 aa23.63■■□□□ 1.37
PABPC1-217ENST00000521067 TJAP1Q5JTD0 557 aa23.63■■□□□ 1.37
PABPC1-217ENST00000521067 PPP2R2DQ66LE6 453 aa23.63■■□□□ 1.37
PABPC1-217ENST00000521067 RETREG2Q8NC44 543 aa23.63■■□□□ 1.37
PABPC1-217ENST00000521067 AMNQ9BXJ7 453 aa23.63■■□□□ 1.37
PABPC1-217ENST00000521067 SENP2Q9HC62 589 aa23.63■■□□□ 1.37
PABPC1-217ENST00000521067 RGS20O76081 388 aa23.62■■□□□ 1.37
PABPC1-217ENST00000521067 RFC2P35250 354 aa23.62■■□□□ 1.37
PABPC1-217ENST00000521067 PTGISQ16647 500 aa23.62■■□□□ 1.37
PABPC1-217ENST00000521067 TTC22Q5TAA0 569 aa23.62■■□□□ 1.37
PABPC1-217ENST00000521067 SESTD1Q86VW0 696 aa23.62■■□□□ 1.37
PABPC1-217ENST00000521067 DHX38Q92620 1227 aaKnown RBP23.62■■□□□ 1.37
PABPC1-217ENST00000521067 SYMPKQ92797 1274 aaKnown RBP23.62■■□□□ 1.37
PABPC1-217ENST00000521067 GBF1Q92538 1859 aa23.62■■□□□ 1.37
PABPC1-217ENST00000521067 RFXAPO00287 272 aa23.61■■□□□ 1.37
PABPC1-217ENST00000521067 ARHGEF15O94989 841 aa23.61■■□□□ 1.37
PABPC1-217ENST00000521067 CYP21A2P08686 494 aa23.61■■□□□ 1.37
PABPC1-217ENST00000521067 TET1Q8NFU7 2136 aa23.61■■□□□ 1.37
PABPC1-217ENST00000521067 NOD1Q9Y239 953 aa23.61■■□□□ 1.37
PABPC1-217ENST00000521067 ZBTB5O15062 677 aa23.6■■□□□ 1.37
PABPC1-217ENST00000521067 CA3P07451 260 aa23.6■■□□□ 1.37
PABPC1-217ENST00000521067 CASTP20810 708 aaKnown RBP23.6■■□□□ 1.37
PABPC1-217ENST00000521067 HOXA13P31271 388 aaPredicted RBP23.6■■□□□ 1.37
PABPC1-217ENST00000521067 BFSP2Q13515 415 aa23.6■■□□□ 1.37
PABPC1-217ENST00000521067 TMEM67Q5HYA8 995 aa23.6■■□□□ 1.37
PABPC1-217ENST00000521067 STOX1Q6ZVD7 989 aa23.6■■□□□ 1.37
PABPC1-217ENST00000521067 EMID1Q96A84 441 aaPredicted RBP23.6■■□□□ 1.37
PABPC1-217ENST00000521067 FTOQ9C0B1 505 aaKnown RBP eCLIP23.6■■□□□ 1.37
PABPC1-217ENST00000521067 SUPT16HQ9Y5B9 1047 aaKnown RBP23.6■■□□□ 1.37
PABPC1-217ENST00000521067 PCDHA1Q9Y5I3 950 aa23.6■■□□□ 1.37
PABPC1-217ENST00000521067 CYTH3O43739 400 aa23.59■■□□□ 1.37
PABPC1-217ENST00000521067 ACTN1P12814 892 aa23.59■■□□□ 1.37
PABPC1-217ENST00000521067 CHMLP26374 656 aa23.59■■□□□ 1.37
PABPC1-217ENST00000521067 DGKDQ16760 1214 aa23.59■■□□□ 1.37
PABPC1-217ENST00000521067 IL31RAQ8NI17 732 aa23.59■■□□□ 1.37
PABPC1-217ENST00000521067 ATXN2LQ8WWM7 1075 aaKnown RBP23.59■■□□□ 1.37
PABPC1-217ENST00000521067 ZFP91Q96JP5 570 aaPredicted RBP23.59■■□□□ 1.37
PABPC1-217ENST00000521067 PDCD2LQ9BRP1 358 aa23.59■■□□□ 1.37
PABPC1-217ENST00000521067 CERS4Q9HA82 394 aa23.59■■□□□ 1.37
PABPC1-217ENST00000521067 HDAC6Q9UBN7 1215 aa23.59■■□□□ 1.37
PABPC1-217ENST00000521067 MRVI1Q9Y6F6 885 aa23.59■■□□□ 1.37
PABPC1-217ENST00000521067 EPOPA6NHQ4 379 aa23.58■■□□□ 1.37
PABPC1-217ENST00000521067 MYCLP12524 364 aaPredicted RBP23.58■■□□□ 1.37
PABPC1-217ENST00000521067 PSEN2P49810 448 aa23.58■■□□□ 1.37
PABPC1-217ENST00000521067 SP2Q02086 613 aa23.58■■□□□ 1.37
PABPC1-217ENST00000521067 LAMC2Q13753 1193 aa23.58■■□□□ 1.37
PABPC1-217ENST00000521067 TCTN1Q2MV58 587 aa23.58■■□□□ 1.37
PABPC1-217ENST00000521067 VSIG10LQ86VR7 867 aa23.58■■□□□ 1.37
PABPC1-217ENST00000521067 PHOSPHO2Q8TCD6 241 aa23.58■■□□□ 1.37
PABPC1-217ENST00000521067 PIGSQ96S52 555 aa23.58■■□□□ 1.37
PABPC1-217ENST00000521067 RIOX1Q9H6W3 641 aa23.58■■□□□ 1.37
PABPC1-217ENST00000521067 GTF2IRD1Q9UHL9 959 aa23.58■■□□□ 1.37
PABPC1-217ENST00000521067 HAS3O00219 553 aa23.57■■□□□ 1.36
PABPC1-217ENST00000521067 SORBS3O60504 671 aa23.57■■□□□ 1.36
PABPC1-217ENST00000521067 ZNF286BP0CG31 522 aa23.57■■□□□ 1.36
PABPC1-217ENST00000521067 HIC1Q14526 733 aa23.57■■□□□ 1.36
PABPC1-217ENST00000521067 GRM4Q14833 912 aa23.57■■□□□ 1.36
PABPC1-217ENST00000521067 MYSM1Q5VVJ2 828 aa23.57■■□□□ 1.36
PABPC1-217ENST00000521067 HOMER1Q86YM7 354 aa23.57■■□□□ 1.36
PABPC1-217ENST00000521067 HERC6Q8IVU3 1022 aa23.57■■□□□ 1.36
PABPC1-217ENST00000521067 PPTC7Q8NI37 304 aa23.57■■□□□ 1.36
PABPC1-217ENST00000521067 CAGE1Q8TC20 777 aa23.57■■□□□ 1.36
PABPC1-217ENST00000521067 GPKOWQ92917 476 aaPredicted RBP eCLIP23.57■■□□□ 1.36
PABPC1-217ENST00000521067 WNT8BQ93098 351 aa23.57■■□□□ 1.36
PABPC1-217ENST00000521067 ASB2Q96Q27 587 aa23.57■■□□□ 1.36
PABPC1-217ENST00000521067 SLC9A7Q96T83 725 aa23.57■■□□□ 1.36
PABPC1-217ENST00000521067 ALG1Q9BT22 464 aa23.57■■□□□ 1.36
PABPC1-217ENST00000521067 THEGQ9P2T0 379 aa23.57■■□□□ 1.36
PABPC1-217ENST00000521067 IFIT3O14879 490 aaKnown RBP23.56■■□□□ 1.36
PABPC1-217ENST00000521067 F2P00734 622 aa23.56■■□□□ 1.36
PABPC1-217ENST00000521067 ZNF200P98182 395 aaPredicted RBP23.56■■□□□ 1.36
PABPC1-217ENST00000521067 TROAPQ12815 778 aa23.56■■□□□ 1.36
PABPC1-217ENST00000521067 PGM5Q15124 567 aa23.56■■□□□ 1.36
PABPC1-217ENST00000521067 HSDL1Q3SXM5 330 aa23.56■■□□□ 1.36
PABPC1-217ENST00000521067 SPRED2Q7Z698 418 aa23.56■■□□□ 1.36
PABPC1-217ENST00000521067 DHX37Q8IY37 1157 aaKnown RBP23.56■■□□□ 1.36
PABPC1-217ENST00000521067 AFAP1L1Q8TED9 768 aa23.56■■□□□ 1.36
PABPC1-217ENST00000521067 BCAS3Q9H6U6 928 aa23.56■■□□□ 1.36
PABPC1-217ENST00000521067 MAP3K20Q9NYL2 800 aaKnown RBP23.56■■□□□ 1.36
PABPC1-217ENST00000521067 U3KPZ7 1027 aaPredicted RBP23.56■■□□□ 1.36
PABPC1-217ENST00000521067 TRIP12Q14669 1992 aaPredicted RBP23.56■■□□□ 1.36
PABPC1-217ENST00000521067 BAZ2BQ9UIF8 2168 aaKnown RBP23.55■■□□□ 1.36
PABPC1-217ENST00000521067 PRRC2BQ5JSZ5 2229 aaKnown RBP23.55■■□□□ 1.36
PABPC1-217ENST00000521067 E7EWF7 191 aa23.55■■□□□ 1.36
PABPC1-217ENST00000521067 NBNO60934 754 aa23.55■■□□□ 1.36
PABPC1-217ENST00000521067 CKBP12277 381 aa23.55■■□□□ 1.36
PABPC1-217ENST00000521067 HOXD8P13378 290 aaPredicted RBP23.55■■□□□ 1.36
PABPC1-217ENST00000521067 SELPP16109 830 aa23.55■■□□□ 1.36
PABPC1-217ENST00000521067 TAP1Q03518 808 aa23.55■■□□□ 1.36
PABPC1-217ENST00000521067 RBL2Q08999 1139 aa23.55■■□□□ 1.36
PABPC1-217ENST00000521067 TRDNQ13061 729 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms