RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 BIN2Q9UBW5 565 aaPredicted RBP14.13□□□□□ -0.15
TRAPPC9-208ENST00000520857 NONOQ15233 471 aaKnown RBP eCLIP14.12□□□□□ -0.154e-6■■■■□ 25.3
TRAPPC9-208ENST00000520857 NPY5RQ15761 445 aa14.12□□□□□ -0.15
TRAPPC9-208ENST00000520857 CCDC13Q8IYE1 715 aa14.12□□□□□ -0.15
TRAPPC9-208ENST00000520857 LRRC45Q96CN5 670 aa14.12□□□□□ -0.15
TRAPPC9-208ENST00000520857 SNCBQ16143 134 aa14.12□□□□□ -0.15
TRAPPC9-208ENST00000520857 ADAT2Q7Z6V5 191 aaKnown RBP14.12□□□□□ -0.15
TRAPPC9-208ENST00000520857 CASKIN2Q8WXE0 1202 aa14.12□□□□□ -0.15
TRAPPC9-208ENST00000520857 TNFRSF25Q93038 417 aa14.12□□□□□ -0.15
TRAPPC9-208ENST00000520857 ERGIC2Q96RQ1 377 aa14.12□□□□□ -0.15
TRAPPC9-208ENST00000520857 SEPT11Q9NVA2 429 aaKnown RBP14.12□□□□□ -0.15
TRAPPC9-208ENST00000520857 SPATA31A3Q5VYP0 1347 aa14.12□□□□□ -0.15
TRAPPC9-208ENST00000520857 WTIPA6NIX2 430 aaPredicted RBP14.12□□□□□ -0.15
TRAPPC9-208ENST00000520857 HMGB1P1B2RPK0 211 aaPredicted RBP14.12□□□□□ -0.15
TRAPPC9-208ENST00000520857 KLRC4O43908 158 aa14.12□□□□□ -0.15
TRAPPC9-208ENST00000520857 GNAQP50148 359 aa14.12□□□□□ -0.15
TRAPPC9-208ENST00000520857 SPTY2D1Q68D10 685 aaPredicted RBP14.12□□□□□ -0.15
TRAPPC9-208ENST00000520857 CNPY4Q8N129 248 aa14.12□□□□□ -0.15
TRAPPC9-208ENST00000520857 FAM133AQ8N9E0 248 aa14.12□□□□□ -0.15
TRAPPC9-208ENST00000520857 UBA5Q9GZZ9 404 aa14.12□□□□□ -0.15
TRAPPC9-208ENST00000520857 SALL4Q9UJQ4 1053 aa14.12□□□□□ -0.15
TRAPPC9-208ENST00000520857 ATRNO75882 1429 aa14.11□□□□□ -0.15
TRAPPC9-208ENST00000520857 RAD51CO43502 376 aa14.11□□□□□ -0.15
TRAPPC9-208ENST00000520857 SKOR1P84550 965 aa14.11□□□□□ -0.15
TRAPPC9-208ENST00000520857 GLE1Q53GS7 698 aaKnown RBP14.11□□□□□ -0.15
TRAPPC9-208ENST00000520857 RUFY4Q6ZNE9 571 aa14.11□□□□□ -0.15
TRAPPC9-208ENST00000520857 DYNLL2Q96FJ2 89 aa14.11□□□□□ -0.15
TRAPPC9-208ENST00000520857 VEZTQ9HBM0 779 aa14.11□□□□□ -0.15
TRAPPC9-208ENST00000520857 KBTBD4Q9NVX7 518 aa14.11□□□□□ -0.15
TRAPPC9-208ENST00000520857 SUFUQ9UMX1 484 aa14.11□□□□□ -0.15
TRAPPC9-208ENST00000520857 ARFGEF2Q9Y6D5 1785 aa14.11□□□□□ -0.15
TRAPPC9-208ENST00000520857 USP17L3A6NCW0 530 aa14.11□□□□□ -0.15
TRAPPC9-208ENST00000520857 USP17L4A6NCW7 530 aa14.11□□□□□ -0.15
TRAPPC9-208ENST00000520857 SMCO2A6NFE2 343 aa14.11□□□□□ -0.15
TRAPPC9-208ENST00000520857 USP17L8P0C7I0 530 aa14.11□□□□□ -0.15
TRAPPC9-208ENST00000520857 PPP1R2P41236 205 aa14.11□□□□□ -0.15
TRAPPC9-208ENST00000520857 PPP1R7Q15435 360 aa14.11□□□□□ -0.15
TRAPPC9-208ENST00000520857 KDM7AQ6ZMT4 941 aa14.11□□□□□ -0.15
TRAPPC9-208ENST00000520857 USP17L1Q7RTZ2 530 aa14.11□□□□□ -0.15
TRAPPC9-208ENST00000520857 SNX29Q8TEQ0 813 aa14.11□□□□□ -0.15
TRAPPC9-208ENST00000520857 WHAMMQ8TF30 809 aa14.11□□□□□ -0.15
TRAPPC9-208ENST00000520857 HAUS2Q9NVX0 235 aa14.11□□□□□ -0.15
TRAPPC9-208ENST00000520857 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.11□□□□□ -0.15
TRAPPC9-208ENST00000520857 MYL1P05976 194 aa14.11□□□□□ -0.15
TRAPPC9-208ENST00000520857 KLRC1P26715 233 aa14.11□□□□□ -0.15
TRAPPC9-208ENST00000520857 KLHDC7AQ5VTJ3 777 aa14.11□□□□□ -0.15
TRAPPC9-208ENST00000520857 DNAAF5Q86Y56 855 aa14.11□□□□□ -0.15
TRAPPC9-208ENST00000520857 PRPF38AQ8NAV1 312 aaKnown RBP14.11□□□□□ -0.15
TRAPPC9-208ENST00000520857 UHMK1Q8TAS1 419 aaKnown RBP14.11□□□□□ -0.15
TRAPPC9-208ENST00000520857 CYFIP2Q96F07 1278 aa14.11□□□□□ -0.15
TRAPPC9-208ENST00000520857 DDX47Q9H0S4 455 aaKnown RBP14.11□□□□□ -0.15
TRAPPC9-208ENST00000520857 C6orf50Q9HD87 102 aa14.11□□□□□ -0.15
TRAPPC9-208ENST00000520857 SLC40A1Q9NP59 571 aa14.11□□□□□ -0.15
TRAPPC9-208ENST00000520857 SLIT3O75094 1523 aa14.11□□□□□ -0.15
TRAPPC9-208ENST00000520857 HGSO14964 777 aaPredicted RBP14.1□□□□□ -0.15
TRAPPC9-208ENST00000520857 ASIC2Q16515 512 aa14.1□□□□□ -0.15
TRAPPC9-208ENST00000520857 MIIPQ5JXC2 388 aa14.1□□□□□ -0.15
TRAPPC9-208ENST00000520857 KRT79Q5XKE5 535 aa14.1□□□□□ -0.15
TRAPPC9-208ENST00000520857 CAVIN3Q969G5 261 aa14.1□□□□□ -0.15
TRAPPC9-208ENST00000520857 SEMA6BQ9H3T3 888 aa14.1□□□□□ -0.15
TRAPPC9-208ENST00000520857 GMNCA6NCL1 334 aa14.1□□□□□ -0.15
TRAPPC9-208ENST00000520857 KRIT1O00522 736 aa14.1□□□□□ -0.15
TRAPPC9-208ENST00000520857 CACNB1Q02641 598 aaPredicted RBP14.1□□□□□ -0.15
TRAPPC9-208ENST00000520857 GKAP1Q5VSY0 366 aaPredicted RBP14.1□□□□□ -0.15
TRAPPC9-208ENST00000520857 RAB34Q9BZG1 259 aa14.1□□□□□ -0.15
TRAPPC9-208ENST00000520857 TTYH3Q9C0H2 523 aa14.1□□□□□ -0.15
TRAPPC9-208ENST00000520857 CCSER1Q9C0I3 900 aa14.1□□□□□ -0.15
TRAPPC9-208ENST00000520857 SAP30BPQ9UHR5 308 aaKnown RBP14.1□□□□□ -0.15
TRAPPC9-208ENST00000520857 PCDHA6Q9UN73 950 aa14.1□□□□□ -0.15
TRAPPC9-208ENST00000520857 PCDHA8Q9Y5H6 950 aa14.1□□□□□ -0.15
TRAPPC9-208ENST00000520857 RASSF10A6NK89 507 aa14.1□□□□□ -0.15
TRAPPC9-208ENST00000520857 FAM107AO95990 144 aa14.1□□□□□ -0.15
TRAPPC9-208ENST00000520857 TNNI2P48788 182 aa14.1□□□□□ -0.15
TRAPPC9-208ENST00000520857 PDXDC1Q6P996 788 aa14.09□□□□□ -0.15
TRAPPC9-208ENST00000520857 KIRREL3Q8IZU9 778 aa14.09□□□□□ -0.15
TRAPPC9-208ENST00000520857 IQCDQ96DY2 449 aa14.09□□□□□ -0.15
TRAPPC9-208ENST00000520857 C4AP0C0L4 1744 aa14.09□□□□□ -0.15
TRAPPC9-208ENST00000520857 C4BP0C0L5 1744 aa14.09□□□□□ -0.15
TRAPPC9-208ENST00000520857 TNS3Q68CZ2 1445 aa14.09□□□□□ -0.15
TRAPPC9-208ENST00000520857 KLRF2D3W0D1 207 aa14.09□□□□□ -0.15
TRAPPC9-208ENST00000520857 CLTAP09496 248 aa14.09□□□□□ -0.15
TRAPPC9-208ENST00000520857 PRLRP16471 622 aa14.09□□□□□ -0.15
TRAPPC9-208ENST00000520857 FAM83BQ5T0W9 1011 aa14.09□□□□□ -0.15
TRAPPC9-208ENST00000520857 HIBCHQ6NVY1 386 aaPredicted RBP14.09□□□□□ -0.15
TRAPPC9-208ENST00000520857 EP400NLQ6ZTU2 488 aa14.09□□□□□ -0.15
TRAPPC9-208ENST00000520857 NEK8Q86SG6 692 aa14.09□□□□□ -0.15
TRAPPC9-208ENST00000520857 DYDC1Q8WWB3 177 aa14.09□□□□□ -0.15
TRAPPC9-208ENST00000520857 TCP11Q8WWU5 503 aa14.09□□□□□ -0.15
TRAPPC9-208ENST00000520857 CEP83Q9Y592 693 aa14.09□□□□□ -0.15
TRAPPC9-208ENST00000520857 PHF20L1A8MW92 1017 aa14.09□□□□□ -0.15
TRAPPC9-208ENST00000520857 EPB41P11171 864 aaKnown RBP14.09□□□□□ -0.15
TRAPPC9-208ENST00000520857 PDHBP11177 359 aa14.09□□□□□ -0.15
TRAPPC9-208ENST00000520857 MAGOHP61326 146 aaKnown RBP14.09□□□□□ -0.15
TRAPPC9-208ENST00000520857 CALCRLQ16602 461 aa14.09□□□□□ -0.15
TRAPPC9-208ENST00000520857 DAAM2Q86T65 1068 aa14.09□□□□□ -0.15
TRAPPC9-208ENST00000520857 TBCKQ8TEA7 893 aa14.09□□□□□ -0.15
TRAPPC9-208ENST00000520857 LARP4BQ92615 738 aaKnown RBP14.09□□□□□ -0.15
TRAPPC9-208ENST00000520857 MAGOHBQ96A72 148 aaKnown RBP14.09□□□□□ -0.15
TRAPPC9-208ENST00000520857 BRIP1Q9BX63 1249 aa14.09□□□□□ -0.15
TRAPPC9-208ENST00000520857 CUEDC2Q9H467 287 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms