RNA–Protein interactions for RNA: ENST00000520752.1

SHPRH-208, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 4

Gene SHPRH, Length 821 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-208ENST00000520752 API5Q9BZZ5 524 aaKnown RBP9.63□□□□□ -0.87
SHPRH-208ENST00000520752 ADAM19Q9H013 955 aa9.63□□□□□ -0.87
SHPRH-208ENST00000520752 MMADHCQ9H3L0 296 aaPredicted RBP9.63□□□□□ -0.87
SHPRH-208ENST00000520752 C12orf49Q9H741 205 aa9.63□□□□□ -0.87
SHPRH-208ENST00000520752 KAT14Q9H8E8 782 aa9.63□□□□□ -0.87
SHPRH-208ENST00000520752 SLC39A2Q9NP94 309 aa9.63□□□□□ -0.87
SHPRH-208ENST00000520752 NUP155O75694 1391 aa9.63□□□□□ -0.87
SHPRH-208ENST00000520752 ABCC4O15439 1325 aa9.62□□□□□ -0.87
SHPRH-208ENST00000520752 SH3TC1Q8TE82 1336 aa9.62□□□□□ -0.87
SHPRH-208ENST00000520752 A2MP01023 1474 aa9.62□□□□□ -0.87
SHPRH-208ENST00000520752 VWA3AA6NCI4 1184 aa9.62□□□□□ -0.87
SHPRH-208ENST00000520752 BIN1O00499 593 aa9.62□□□□□ -0.87
SHPRH-208ENST00000520752 WDHD1O75717 1129 aaPredicted RBP9.62□□□□□ -0.87
SHPRH-208ENST00000520752 DNAJC8O75937 253 aaPredicted RBP9.62□□□□□ -0.87
SHPRH-208ENST00000520752 NPTXRO95502 500 aa9.62□□□□□ -0.87
SHPRH-208ENST00000520752 VCAM1P19320 739 aa9.62□□□□□ -0.87
SHPRH-208ENST00000520752 HSPA4P34932 840 aa9.62□□□□□ -0.87
SHPRH-208ENST00000520752 GJA8P48165 433 aa9.62□□□□□ -0.87
SHPRH-208ENST00000520752 DGKGP49619 791 aa9.62□□□□□ -0.87
SHPRH-208ENST00000520752 SESN3P58005 492 aa9.62□□□□□ -0.87
SHPRH-208ENST00000520752 GNGT1P63211 74 aa9.62□□□□□ -0.87
SHPRH-208ENST00000520752 INSM1Q01101 510 aaPredicted RBP9.62□□□□□ -0.87
SHPRH-208ENST00000520752 APBA1Q02410 837 aa9.62□□□□□ -0.87
SHPRH-208ENST00000520752 CMPK2Q5EBM0 449 aa9.62□□□□□ -0.87
SHPRH-208ENST00000520752 SPTY2D1Q68D10 685 aaPredicted RBP9.62□□□□□ -0.87
SHPRH-208ENST00000520752 SESTD1Q86VW0 696 aa9.62□□□□□ -0.87
SHPRH-208ENST00000520752 DHX40Q8IX18 779 aaKnown RBP9.62□□□□□ -0.87
SHPRH-208ENST00000520752 CKAP2LQ8IYA6 745 aa9.62□□□□□ -0.87
SHPRH-208ENST00000520752 RNF168Q8IYW5 571 aaPredicted RBP9.62□□□□□ -0.87
SHPRH-208ENST00000520752 AFAP1Q8N556 730 aa9.62□□□□□ -0.87
SHPRH-208ENST00000520752 SAMD3Q8N6K7 520 aa9.62□□□□□ -0.87
SHPRH-208ENST00000520752 COG1Q8WTW3 980 aa9.62□□□□□ -0.87
SHPRH-208ENST00000520752 TEKT1Q969V4 418 aa9.62□□□□□ -0.87
SHPRH-208ENST00000520752 TTC14Q96N46 770 aa9.62□□□□□ -0.87
SHPRH-208ENST00000520752 MPHOSPH6Q99547 160 aaKnown RBP9.62□□□□□ -0.87
SHPRH-208ENST00000520752 POLR3CQ9BUI4 534 aaPredicted RBP9.62□□□□□ -0.87
SHPRH-208ENST00000520752 TRIM4Q9C037 500 aa9.62□□□□□ -0.87
SHPRH-208ENST00000520752 UNC45AQ9H3U1 944 aa9.62□□□□□ -0.87
SHPRH-208ENST00000520752 SWAP70Q9UH65 585 aa9.62□□□□□ -0.87
SHPRH-208ENST00000520752 TPX2Q9ULW0 747 aaKnown RBP9.62□□□□□ -0.87
SHPRH-208ENST00000520752 TMCO1Q9UM00 188 aa9.62□□□□□ -0.87
SHPRH-208ENST00000520752 HPCAL4Q9UM19 191 aa9.62□□□□□ -0.87
SHPRH-208ENST00000520752 TRIM33Q9UPN9 1127 aa9.62□□□□□ -0.87
SHPRH-208ENST00000520752 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.62□□□□□ -0.87
SHPRH-208ENST00000520752 PPP2R2CQ9Y2T4 447 aa9.62□□□□□ -0.87
SHPRH-208ENST00000520752 C15orf41Q9Y2V0 281 aa9.62□□□□□ -0.87
SHPRH-208ENST00000520752 AOX1Q06278 1338 aa9.61□□□□□ -0.87
SHPRH-208ENST00000520752 ZNF518AQ6AHZ1 1483 aa9.61□□□□□ -0.87
SHPRH-208ENST00000520752 TMEM238LA0A1B0GVL6 79 aa9.61□□□□□ -0.87
SHPRH-208ENST00000520752 CTAGE15A4D2H0 777 aa9.61□□□□□ -0.87
SHPRH-208ENST00000520752 RASSF10A6NK89 507 aa9.61□□□□□ -0.87
SHPRH-208ENST00000520752 STXBP3O00186 592 aa9.61□□□□□ -0.87
SHPRH-208ENST00000520752 TPD52L2O43399 206 aaKnown RBP9.61□□□□□ -0.87
SHPRH-208ENST00000520752 STX10O60499 249 aa9.61□□□□□ -0.87
SHPRH-208ENST00000520752 SORBS3O60504 671 aa9.61□□□□□ -0.87
SHPRH-208ENST00000520752 CTAGE8P0CG41 777 aa9.61□□□□□ -0.87
SHPRH-208ENST00000520752 PTPRAP18433 802 aa9.61□□□□□ -0.87
SHPRH-208ENST00000520752 EIF4BP23588 611 aaKnown RBP9.61□□□□□ -0.87
SHPRH-208ENST00000520752 VAMP1P23763 118 aa9.61□□□□□ -0.87
SHPRH-208ENST00000520752 PTPN12Q05209 780 aaKnown RBP9.61□□□□□ -0.87
SHPRH-208ENST00000520752 PABPC4Q13310 644 aaKnown RBP eCLIP9.61□□□□□ -0.87
SHPRH-208ENST00000520752 COL9A3Q14050 684 aaPredicted RBP9.61□□□□□ -0.87
SHPRH-208ENST00000520752 MRPL58Q14197 206 aaKnown RBP9.61□□□□□ -0.87
SHPRH-208ENST00000520752 KBTBD12Q3ZCT8 623 aa9.61□□□□□ -0.87
SHPRH-208ENST00000520752 ILDR2Q71H61 639 aa9.61□□□□□ -0.87
SHPRH-208ENST00000520752 ARMC9Q7Z3E5 817 aa9.61□□□□□ -0.87
SHPRH-208ENST00000520752 TMC6Q7Z403 805 aa9.61□□□□□ -0.87
SHPRH-208ENST00000520752 CTAGE6Q86UF2 777 aa9.61□□□□□ -0.87
SHPRH-208ENST00000520752 CCAR1Q8IX12 1150 aaKnown RBP9.61□□□□□ -0.87
SHPRH-208ENST00000520752 CTAGE4Q8IX94 777 aa9.61□□□□□ -0.87
SHPRH-208ENST00000520752 SIRT2Q8IXJ6 389 aa9.61□□□□□ -0.87
SHPRH-208ENST00000520752 ANKRD44Q8N8A2 993 aa9.61□□□□□ -0.87
SHPRH-208ENST00000520752 CCDC148Q8NFR7 591 aa9.61□□□□□ -0.87
SHPRH-208ENST00000520752 BSNDQ8WZ55 320 aa9.61□□□□□ -0.87
SHPRH-208ENST00000520752 CUL5Q93034 780 aa9.61□□□□□ -0.87
SHPRH-208ENST00000520752 SPATA32Q96LK8 384 aa9.61□□□□□ -0.87
SHPRH-208ENST00000520752 FAM161BQ96MY7 647 aa9.61□□□□□ -0.87
SHPRH-208ENST00000520752 ZWILCHQ9H900 591 aa9.61□□□□□ -0.87
SHPRH-208ENST00000520752 LUC7LQ9NQ29 371 aaKnown RBP9.61□□□□□ -0.87
SHPRH-208ENST00000520752 MYO1AQ9UBC5 1043 aa9.61□□□□□ -0.87
SHPRH-208ENST00000520752 FAM8A1Q9UBU6 413 aa9.61□□□□□ -0.87
SHPRH-208ENST00000520752 ASXL2Q76L83 1435 aa9.61□□□□□ -0.87
SHPRH-208ENST00000520752 TTC37Q6PGP7 1564 aa9.61□□□□□ -0.87
SHPRH-208ENST00000520752 GRIN2DO15399 1336 aa9.6□□□□□ -0.87
SHPRH-208ENST00000520752 CEP152O94986 1710 aa9.6□□□□□ -0.87
SHPRH-208ENST00000520752 ARHGEF5Q12774 1597 aa9.6□□□□□ -0.87
SHPRH-208ENST00000520752 UNCXA6NJT0 531 aa9.6□□□□□ -0.87
SHPRH-208ENST00000520752 IKBKBO14920 756 aa9.6□□□□□ -0.87
SHPRH-208ENST00000520752 PRC1O43663 620 aa9.6□□□□□ -0.87
SHPRH-208ENST00000520752 HARSP12081 509 aaKnown RBP9.6□□□□□ -0.87
SHPRH-208ENST00000520752 XRCC5P13010 732 aaKnown RBP9.6□□□□□ -0.87
SHPRH-208ENST00000520752 DESP17661 470 aa9.6□□□□□ -0.87
SHPRH-208ENST00000520752 ITPKAP23677 461 aa9.6□□□□□ -0.87
SHPRH-208ENST00000520752 GRIA4P48058 902 aa9.6□□□□□ -0.87
SHPRH-208ENST00000520752 CCNG1P51959 295 aa9.6□□□□□ -0.87
SHPRH-208ENST00000520752 ALS2CLQ60I27 953 aa9.6□□□□□ -0.87
SHPRH-208ENST00000520752 C6orf89Q6UWU4 347 aa9.6□□□□□ -0.87
SHPRH-208ENST00000520752 ADAMTSL4Q6UY14 1074 aa9.6□□□□□ -0.87
SHPRH-208ENST00000520752 C8orf86Q6ZUL3 223 aa9.6□□□□□ -0.87
SHPRH-208ENST00000520752 CCDC121Q6ZUS5 278 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 219.1 ms