RNA–Protein interactions for RNA: ENST00000520525.1

TRAPPC13-212, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-212ENST00000520525 POMZP3Q6PJE2 187 aa4.82□□□□□ -1.64
TRAPPC13-212ENST00000520525 FRMD5Q7Z6J6 570 aa4.82□□□□□ -1.64
TRAPPC13-212ENST00000520525 TRIM59Q8IWR1 403 aa4.82□□□□□ -1.64
TRAPPC13-212ENST00000520525 CRACR2BQ8N4Y2 399 aaPredicted RBP4.82□□□□□ -1.64
TRAPPC13-212ENST00000520525 LINC01356Q8N9X3 169 aa4.82□□□□□ -1.64
TRAPPC13-212ENST00000520525 SGSM3Q96HU1 749 aa4.82□□□□□ -1.64
TRAPPC13-212ENST00000520525 SPATA9Q9BWV2 254 aa4.82□□□□□ -1.64
TRAPPC13-212ENST00000520525 BCAS3Q9H6U6 928 aa4.82□□□□□ -1.64
TRAPPC13-212ENST00000520525 LRP2BPQ9P2M1 347 aa4.82□□□□□ -1.64
TRAPPC13-212ENST00000520525 GULP1Q9UBP9 304 aa4.82□□□□□ -1.64
TRAPPC13-212ENST00000520525 MYRFQ9Y2G1 1151 aa4.82□□□□□ -1.64
TRAPPC13-212ENST00000520525 KDM2BQ8NHM5 1336 aa4.81□□□□□ -1.64
TRAPPC13-212ENST00000520525 NPHP3-ACAD11A0A0J9YXS1 232 aa4.81□□□□□ -1.64
TRAPPC13-212ENST00000520525 C7orf72A4D263 438 aa4.81□□□□□ -1.64
TRAPPC13-212ENST00000520525 KCNH1O95259 989 aa4.81□□□□□ -1.64
TRAPPC13-212ENST00000520525 CAPNS1P04632 268 aa4.81□□□□□ -1.64
TRAPPC13-212ENST00000520525 ASGR2P07307 311 aa4.81□□□□□ -1.64
TRAPPC13-212ENST00000520525 PAMP19021 973 aa4.81□□□□□ -1.64
TRAPPC13-212ENST00000520525 HTRA3P83110 453 aa4.81□□□□□ -1.64
TRAPPC13-212ENST00000520525 CAP1Q01518 475 aa4.81□□□□□ -1.64
TRAPPC13-212ENST00000520525 SCRN1Q12765 414 aa4.81□□□□□ -1.64
TRAPPC13-212ENST00000520525 TARBP2Q15633 366 aaKnown RBP4.81□□□□□ -1.64
TRAPPC13-212ENST00000520525 NOP9Q86U38 636 aaKnown RBP4.81□□□□□ -1.64
TRAPPC13-212ENST00000520525 LRRC47Q8N1G4 583 aaKnown RBP4.81□□□□□ -1.64
TRAPPC13-212ENST00000520525 LILRB2Q8N423 598 aa4.81□□□□□ -1.64
TRAPPC13-212ENST00000520525 LZTR1Q8N653 840 aa4.81□□□□□ -1.64
TRAPPC13-212ENST00000520525 NETO2Q8NC67 525 aa4.81□□□□□ -1.64
TRAPPC13-212ENST00000520525 TSPAN17Q96FV3 270 aa4.81□□□□□ -1.64
TRAPPC13-212ENST00000520525 RNF38Q9H0F5 515 aa4.81□□□□□ -1.64
TRAPPC13-212ENST00000520525 CLEC1BQ9P126 229 aa4.81□□□□□ -1.64
TRAPPC13-212ENST00000520525 PLS3P13797 630 aa4.8□□□□□ -1.64
TRAPPC13-212ENST00000520525 PMLP29590 882 aa4.8□□□□□ -1.64
TRAPPC13-212ENST00000520525 PPP2R2AP63151 447 aa4.8□□□□□ -1.64
TRAPPC13-212ENST00000520525 FOXO4P98177 505 aa4.8□□□□□ -1.64
TRAPPC13-212ENST00000520525 DLX2Q07687 328 aaPredicted RBP4.8□□□□□ -1.64
TRAPPC13-212ENST00000520525 HSP90AA2PQ14568 343 aaPredicted RBP4.8□□□□□ -1.64
TRAPPC13-212ENST00000520525 GTF2IRD2BQ6EKJ0 949 aa4.8□□□□□ -1.64
TRAPPC13-212ENST00000520525 HHIPL2Q6UWX4 724 aa4.8□□□□□ -1.64
TRAPPC13-212ENST00000520525 GTF2IRD2Q86UP8 949 aa4.8□□□□□ -1.64
TRAPPC13-212ENST00000520525 JMYQ8N9B5 988 aa4.8□□□□□ -1.64
TRAPPC13-212ENST00000520525 FNIP1Q8TF40 1166 aa4.8□□□□□ -1.64
TRAPPC13-212ENST00000520525 BTN2A2Q8WVV5 523 aa4.8□□□□□ -1.64
TRAPPC13-212ENST00000520525 ALG3Q92685 438 aa4.8□□□□□ -1.64
TRAPPC13-212ENST00000520525 DPF3Q92784 378 aa4.8□□□□□ -1.64
TRAPPC13-212ENST00000520525 BDH2Q9BUT1 245 aa4.8□□□□□ -1.64
TRAPPC13-212ENST00000520525 GPRC5CQ9NQ84 441 aa4.8□□□□□ -1.64
TRAPPC13-212ENST00000520525 ARHGEF4Q9NR80 690 aa4.8□□□□□ -1.64
TRAPPC13-212ENST00000520525 TRBV23OR9-2A0A075B6M9 112 aa4.79□□□□□ -1.64
TRAPPC13-212ENST00000520525 AKAP8O43823 692 aaKnown RBP4.79□□□□□ -1.64
TRAPPC13-212ENST00000520525 PRICKLE3O43900 615 aaPredicted RBP4.79□□□□□ -1.64
TRAPPC13-212ENST00000520525 ADCY3O60266 1144 aa4.79□□□□□ -1.64
TRAPPC13-212ENST00000520525 THBDP07204 575 aa4.79□□□□□ -1.64
TRAPPC13-212ENST00000520525 FAM153BP0C7A2 387 aa4.79□□□□□ -1.64
TRAPPC13-212ENST00000520525 NCAM1P13591 858 aa4.79□□□□□ -1.64
TRAPPC13-212ENST00000520525 GRIA2P42262 883 aa4.79□□□□□ -1.64
TRAPPC13-212ENST00000520525 KRTAP1-1Q07627 177 aa4.79□□□□□ -1.64
TRAPPC13-212ENST00000520525 RTP5Q14D33 572 aa4.79□□□□□ -1.64
TRAPPC13-212ENST00000520525 WWC2Q6AWC2 1192 aa4.79□□□□□ -1.64
TRAPPC13-212ENST00000520525 GIMAP6Q6P9H5 292 aa4.79□□□□□ -1.64
TRAPPC13-212ENST00000520525 B3GNT8Q7Z7M8 397 aa4.79□□□□□ -1.64
TRAPPC13-212ENST00000520525 CABP7Q86V35 215 aa4.79□□□□□ -1.64
TRAPPC13-212ENST00000520525 PLEKHO2Q8TD55 490 aa4.79□□□□□ -1.64
TRAPPC13-212ENST00000520525 MMP19Q99542 508 aa4.79□□□□□ -1.64
TRAPPC13-212ENST00000520525 AARSD1Q9BTE6 412 aaKnown RBP4.79□□□□□ -1.64
TRAPPC13-212ENST00000520525 NKX2-4Q9H2Z4 354 aa4.79□□□□□ -1.64
TRAPPC13-212ENST00000520525 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.79□□□□□ -1.64
TRAPPC13-212ENST00000520525 DBR1Q9UK59 544 aaKnown RBP4.79□□□□□ -1.64
TRAPPC13-212ENST00000520525 TRAV20A0A0B4J274 112 aa4.78□□□□□ -1.64
TRAPPC13-212ENST00000520525 A0A1B0GTL3 188 aa4.78□□□□□ -1.64
TRAPPC13-212ENST00000520525 ARNTLO00327 626 aa4.78□□□□□ -1.64
TRAPPC13-212ENST00000520525 NPHS1O60500 1241 aa4.78□□□□□ -1.64
TRAPPC13-212ENST00000520525 NTRK1P04629 796 aa4.78□□□□□ -1.64
TRAPPC13-212ENST00000520525 SLURP1P55000 103 aa4.78□□□□□ -1.64
TRAPPC13-212ENST00000520525 LONRF2Q1L5Z9 754 aa4.78□□□□□ -1.64
TRAPPC13-212ENST00000520525 INF2Q27J81 1249 aa4.78□□□□□ -1.64
TRAPPC13-212ENST00000520525 C2orf27AQ580R0 203 aa4.78□□□□□ -1.64
TRAPPC13-212ENST00000520525 LIPIQ6XZB0 460 aa4.78□□□□□ -1.64
TRAPPC13-212ENST00000520525 SAPCD2Q86UD0 394 aa4.78□□□□□ -1.64
TRAPPC13-212ENST00000520525 JAZF1Q86VZ6 243 aa4.78□□□□□ -1.64
TRAPPC13-212ENST00000520525 ADGRG2Q8IZP9 1017 aa4.78□□□□□ -1.64
TRAPPC13-212ENST00000520525 NLGN1Q8N2Q7 840 aa4.78□□□□□ -1.64
TRAPPC13-212ENST00000520525 ZBTB38Q8NAP3 1195 aaPredicted RBP4.78□□□□□ -1.64
TRAPPC13-212ENST00000520525 NPLOC4Q8TAT6 608 aa4.78□□□□□ -1.64
TRAPPC13-212ENST00000520525 THAP3Q8WTV1 239 aaPredicted RBP4.78□□□□□ -1.64
TRAPPC13-212ENST00000520525 FRS2Q8WU20 508 aa4.78□□□□□ -1.64
TRAPPC13-212ENST00000520525 PEX11GQ96HA9 241 aa4.78□□□□□ -1.64
TRAPPC13-212ENST00000520525 GPR20Q99678 358 aa4.78□□□□□ -1.64
TRAPPC13-212ENST00000520525 KANSL2Q9H9L4 492 aa4.78□□□□□ -1.64
TRAPPC13-212ENST00000520525 CYP26B1Q9NR63 512 aa4.78□□□□□ -1.64
TRAPPC13-212ENST00000520525 SIT1Q9Y3P8 196 aa4.78□□□□□ -1.64
TRAPPC13-212ENST00000520525 TBX22Q9Y458 520 aa4.78□□□□□ -1.64
TRAPPC13-212ENST00000520525 PMF1-BGLAPU3KQ54 211 aa4.78□□□□□ -1.64
TRAPPC13-212ENST00000520525 SH3D21A4FU49 640 aa4.77□□□□□ -1.65
TRAPPC13-212ENST00000520525 SUV39H1O43463 412 aa4.77□□□□□ -1.65
TRAPPC13-212ENST00000520525 FUCA1P04066 466 aa4.77□□□□□ -1.65
TRAPPC13-212ENST00000520525 SCG5P05408 212 aa4.77□□□□□ -1.65
TRAPPC13-212ENST00000520525 FGFR1P11362 822 aa4.77□□□□□ -1.65
TRAPPC13-212ENST00000520525 HOXC12P31275 282 aa4.77□□□□□ -1.65
TRAPPC13-212ENST00000520525 GFRA1P56159 465 aa4.77□□□□□ -1.65
TRAPPC13-212ENST00000520525 SF1Q15637 639 aaKnown RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms