RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 MYH6P13533 1939 aa17.63■□□□□ 0.41
CSMD1-207ENST00000520451 PALM3A6NDB9 673 aaPredicted RBP17.63■□□□□ 0.41
CSMD1-207ENST00000520451 ACTN1P12814 892 aa17.63■□□□□ 0.41
CSMD1-207ENST00000520451 CASTP20810 708 aaKnown RBP17.63■□□□□ 0.41
CSMD1-207ENST00000520451 IRX6P78412 446 aaPredicted RBP17.63■□□□□ 0.41
CSMD1-207ENST00000520451 BFSP2Q13515 415 aa17.63■□□□□ 0.41
CSMD1-207ENST00000520451 PTGISQ16647 500 aa17.63■□□□□ 0.41
CSMD1-207ENST00000520451 RALYLQ86SE5 291 aaKnown RBP17.63■□□□□ 0.41
CSMD1-207ENST00000520451 HOMER1Q86YM7 354 aa17.63■□□□□ 0.41
CSMD1-207ENST00000520451 PPM1EQ8WY54 764 aa17.63■□□□□ 0.41
CSMD1-207ENST00000520451 DDX41Q9UJV9 622 aaKnown RBP17.63■□□□□ 0.41
CSMD1-207ENST00000520451 PCDHA11Q9Y5I1 949 aa17.63■□□□□ 0.41
CSMD1-207ENST00000520451 ERICH2A1L162 156 aa17.62■□□□□ 0.41
CSMD1-207ENST00000520451 IQCF3P0C7M6 154 aa17.62■□□□□ 0.41
CSMD1-207ENST00000520451 MYCLP12524 364 aaPredicted RBP17.62■□□□□ 0.41
CSMD1-207ENST00000520451 MYOGP15173 224 aa17.62■□□□□ 0.41
CSMD1-207ENST00000520451 IGFBP4P22692 258 aa17.62■□□□□ 0.41
CSMD1-207ENST00000520451 HOXA13P31271 388 aaPredicted RBP17.62■□□□□ 0.41
CSMD1-207ENST00000520451 GHRHRQ02643 423 aa17.62■□□□□ 0.41
CSMD1-207ENST00000520451 ADGRE1Q14246 886 aa17.62■□□□□ 0.41
CSMD1-207ENST00000520451 GRM4Q14833 912 aa17.62■□□□□ 0.41
CSMD1-207ENST00000520451 DGKDQ16760 1214 aa17.62■□□□□ 0.41
CSMD1-207ENST00000520451 PPP2R2DQ66LE6 453 aa17.62■□□□□ 0.41
CSMD1-207ENST00000520451 KAT2BQ92831 832 aa17.62■□□□□ 0.41
CSMD1-207ENST00000520451 FTOQ9C0B1 505 aaKnown RBP eCLIP17.62■□□□□ 0.41
CSMD1-207ENST00000520451 SENP2Q9HC62 589 aa17.62■□□□□ 0.41
CSMD1-207ENST00000520451 TAF6LQ9Y6J9 622 aa17.62■□□□□ 0.41
CSMD1-207ENST00000520451 GBF1Q92538 1859 aa17.61■□□□□ 0.41
CSMD1-207ENST00000520451 SCN5AQ14524 2016 aa17.61■□□□□ 0.41
CSMD1-207ENST00000520451 WTAPQ15007 396 aa17.61■□□□□ 0.41
CSMD1-207ENST00000520451 SART3Q15020 963 aaKnown RBP17.61■□□□□ 0.41
CSMD1-207ENST00000520451 SLC35G1Q2M3R5 365 aa17.61■□□□□ 0.41
CSMD1-207ENST00000520451 GDF6Q6KF10 455 aaPredicted RBP17.61■□□□□ 0.41
CSMD1-207ENST00000520451 SESTD1Q86VW0 696 aa17.61■□□□□ 0.41
CSMD1-207ENST00000520451 CCDC155Q8N6L0 562 aa17.61■□□□□ 0.41
CSMD1-207ENST00000520451 EMID1Q96A84 441 aaPredicted RBP17.61■□□□□ 0.41
CSMD1-207ENST00000520451 PIGSQ96S52 555 aa17.61■□□□□ 0.41
CSMD1-207ENST00000520451 PDCD2LQ9BRP1 358 aa17.61■□□□□ 0.41
CSMD1-207ENST00000520451 PRDM6Q9NQX0 595 aa17.61■□□□□ 0.41
CSMD1-207ENST00000520451 MAP3K20Q9NYL2 800 aaKnown RBP17.61■□□□□ 0.41
CSMD1-207ENST00000520451 KIAA1217Q5T5P2 1943 aa17.6■□□□□ 0.41
CSMD1-207ENST00000520451 MYO9BQ13459 2157 aa17.6■□□□□ 0.41
CSMD1-207ENST00000520451 E7EWF7 191 aa17.6■□□□□ 0.41
CSMD1-207ENST00000520451 SGSM2O43147 1006 aa17.6■□□□□ 0.41
CSMD1-207ENST00000520451 TRAF1Q13077 416 aa17.6■□□□□ 0.41
CSMD1-207ENST00000520451 LAMC2Q13753 1193 aa17.6■□□□□ 0.41
CSMD1-207ENST00000520451 STOX1Q6ZVD7 989 aa17.6■□□□□ 0.41
CSMD1-207ENST00000520451 DHX37Q8IY37 1157 aaKnown RBP17.6■□□□□ 0.41
CSMD1-207ENST00000520451 NCOA7Q8NI08 942 aa17.6■□□□□ 0.41
CSMD1-207ENST00000520451 PPTC7Q8NI37 304 aa17.6■□□□□ 0.41
CSMD1-207ENST00000520451 CAGE1Q8TC20 777 aa17.6■□□□□ 0.41
CSMD1-207ENST00000520451 CTAGE1Q96RT6 745 aa17.6■□□□□ 0.41
CSMD1-207ENST00000520451 ALG1Q9BT22 464 aa17.6■□□□□ 0.41
CSMD1-207ENST00000520451 KATNAL1Q9BW62 490 aa17.6■□□□□ 0.41
CSMD1-207ENST00000520451 RIOX1Q9H6W3 641 aa17.6■□□□□ 0.41
CSMD1-207ENST00000520451 TANC1Q9C0D5 1861 aa17.6■□□□□ 0.41
CSMD1-207ENST00000520451 GCOM1H8Y6P7 765 aaPredicted RBP17.59■□□□□ 0.41
CSMD1-207ENST00000520451 RGS20O76081 388 aa17.59■□□□□ 0.41
CSMD1-207ENST00000520451 POLR2MP0CAP2 368 aa17.59■□□□□ 0.41
CSMD1-207ENST00000520451 ZNF286BP0CG31 522 aa17.59■□□□□ 0.41
CSMD1-207ENST00000520451 PSEN2P49810 448 aa17.59■□□□□ 0.41
CSMD1-207ENST00000520451 PGM5Q15124 567 aa17.59■□□□□ 0.41
CSMD1-207ENST00000520451 CCDC85BQ15834 202 aaPredicted RBP17.59■□□□□ 0.41
CSMD1-207ENST00000520451 TMEM67Q5HYA8 995 aa17.59■□□□□ 0.41
CSMD1-207ENST00000520451 SAMD3Q8N6K7 520 aa17.59■□□□□ 0.41
CSMD1-207ENST00000520451 C7orf31Q8N865 590 aa17.59■□□□□ 0.41
CSMD1-207ENST00000520451 IL31RAQ8NI17 732 aa17.59■□□□□ 0.41
CSMD1-207ENST00000520451 AFAP1L1Q8TED9 768 aa17.59■□□□□ 0.41
CSMD1-207ENST00000520451 SYMPKQ92797 1274 aaKnown RBP17.59■□□□□ 0.41
CSMD1-207ENST00000520451 SLC9A7Q96T83 725 aa17.59■□□□□ 0.41
CSMD1-207ENST00000520451 HDAC6Q9UBN7 1215 aa17.59■□□□□ 0.41
CSMD1-207ENST00000520451 GTF2IRD1Q9UHL9 959 aa17.59■□□□□ 0.41
CSMD1-207ENST00000520451 PNMA6FA0A0J9YX94 578 aa17.58■□□□□ 0.4
CSMD1-207ENST00000520451 CYTH3O43739 400 aa17.58■□□□□ 0.4
CSMD1-207ENST00000520451 SORBS3O60504 671 aa17.58■□□□□ 0.4
CSMD1-207ENST00000520451 F2P00734 622 aa17.58■□□□□ 0.4
CSMD1-207ENST00000520451 CA3P07451 260 aa17.58■□□□□ 0.4
CSMD1-207ENST00000520451 TROAPQ12815 778 aa17.58■□□□□ 0.4
CSMD1-207ENST00000520451 MFSD10Q14728 455 aa17.58■□□□□ 0.4
CSMD1-207ENST00000520451 TJAP1Q5JTD0 557 aa17.58■□□□□ 0.4
CSMD1-207ENST00000520451 KCNV1Q6PIU1 500 aa17.58■□□□□ 0.4
CSMD1-207ENST00000520451 CATIPQ7Z7H3 387 aa17.58■□□□□ 0.4
CSMD1-207ENST00000520451 VSIG10LQ86VR7 867 aa17.58■□□□□ 0.4
CSMD1-207ENST00000520451 FCHSD1Q86WN1 690 aa17.58■□□□□ 0.4
CSMD1-207ENST00000520451 DHX38Q92620 1227 aaKnown RBP17.58■□□□□ 0.4
CSMD1-207ENST00000520451 TTC28Q96AY4 2481 aa17.58■□□□□ 0.4
CSMD1-207ENST00000520451 GGPS1O95749 300 aa17.57■□□□□ 0.4
CSMD1-207ENST00000520451 SELPP16109 830 aa17.57■□□□□ 0.4
CSMD1-207ENST00000520451 CCND2P30279 289 aa17.57■□□□□ 0.4
CSMD1-207ENST00000520451 ANTXR2P58335 489 aa17.57■□□□□ 0.4
CSMD1-207ENST00000520451 KIAA0753Q2KHM9 967 aa17.57■□□□□ 0.4
CSMD1-207ENST00000520451 CELF3Q5SZQ8 465 aaKnown RBP17.57■□□□□ 0.4
CSMD1-207ENST00000520451 LRRC8DQ7L1W4 858 aa17.57■□□□□ 0.4
CSMD1-207ENST00000520451 PHOSPHO2Q8TCD6 241 aa17.57■□□□□ 0.4
CSMD1-207ENST00000520451 PIBF1Q8WXW3 757 aa17.57■□□□□ 0.4
CSMD1-207ENST00000520451 ZFP91Q96JP5 570 aaPredicted RBP17.57■□□□□ 0.4
CSMD1-207ENST00000520451 SPATA33Q96N06 139 aa17.57■□□□□ 0.4
CSMD1-207ENST00000520451 HAS3O00219 553 aa17.56■□□□□ 0.4
CSMD1-207ENST00000520451 BAIAP3O94812 1187 aa17.56■□□□□ 0.4
CSMD1-207ENST00000520451 HOXD8P13378 290 aaPredicted RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms