RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 ZXDAP98168 799 aa4.86□□□□□ -1.63
HMGB1P41-201ENST00000520234 CYP4F8P98187 520 aa4.86□□□□□ -1.63
HMGB1P41-201ENST00000520234 SQSTM1Q13501 440 aa4.86□□□□□ -1.63
HMGB1P41-201ENST00000520234 NTRK3Q16288 839 aa4.86□□□□□ -1.63
HMGB1P41-201ENST00000520234 STYK1Q6J9G0 422 aa4.86□□□□□ -1.63
HMGB1P41-201ENST00000520234 GIMAP6Q6P9H5 292 aa4.86□□□□□ -1.63
HMGB1P41-201ENST00000520234 MAMDC2Q7Z304 686 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P41-201ENST00000520234 JAZF1Q86VZ6 243 aa4.86□□□□□ -1.63
HMGB1P41-201ENST00000520234 CPNE8Q86YQ8 564 aa4.86□□□□□ -1.63
HMGB1P41-201ENST00000520234 CCDC103Q8IW40 242 aa4.86□□□□□ -1.63
HMGB1P41-201ENST00000520234 APPBP2Q92624 585 aa4.86□□□□□ -1.63
HMGB1P41-201ENST00000520234 PTPRN2Q92932 1015 aa4.86□□□□□ -1.63
HMGB1P41-201ENST00000520234 SHISA4Q96DD7 197 aa4.86□□□□□ -1.63
HMGB1P41-201ENST00000520234 TEPSINQ96N21 525 aa4.86□□□□□ -1.63
HMGB1P41-201ENST00000520234 GPR20Q99678 358 aa4.86□□□□□ -1.63
HMGB1P41-201ENST00000520234 MRPL4Q9BYD3 311 aaKnown RBP4.86□□□□□ -1.63
HMGB1P41-201ENST00000520234 PDLIM7Q9NR12 457 aa4.86□□□□□ -1.63
HMGB1P41-201ENST00000520234 IMPACTQ9P2X3 320 aa4.86□□□□□ -1.63
HMGB1P41-201ENST00000520234 YBX2Q9Y2T7 364 aaKnown RBP4.86□□□□□ -1.63
HMGB1P41-201ENST00000520234 TIMM13Q9Y5L4 95 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P41-201ENST00000520234 MRPL42Q9Y6G3 142 aaKnown RBP4.86□□□□□ -1.63
HMGB1P41-201ENST00000520234 A0A1W2PQJ5 194 aa4.85□□□□□ -1.63
HMGB1P41-201ENST00000520234 ARNTLO00327 626 aa4.85□□□□□ -1.63
HMGB1P41-201ENST00000520234 AQP7O14520 342 aa4.85□□□□□ -1.63
HMGB1P41-201ENST00000520234 ENPP3O14638 875 aa4.85□□□□□ -1.63
HMGB1P41-201ENST00000520234 EFCAB14O75071 495 aa4.85□□□□□ -1.63
HMGB1P41-201ENST00000520234 APPP05067 770 aa4.85□□□□□ -1.63
HMGB1P41-201ENST00000520234 PRKCAP17252 672 aa4.85□□□□□ -1.63
HMGB1P41-201ENST00000520234 GPR85P60893 370 aa4.85□□□□□ -1.63
HMGB1P41-201ENST00000520234 RPL11P62913 178 aaKnown RBP4.85□□□□□ -1.63
HMGB1P41-201ENST00000520234 INF2Q27J81 1249 aa4.85□□□□□ -1.63
HMGB1P41-201ENST00000520234 TIGD5Q53EQ6 642 aa4.85□□□□□ -1.63
HMGB1P41-201ENST00000520234 C16orf86Q6ZW13 317 aa4.85□□□□□ -1.63
HMGB1P41-201ENST00000520234 IFNL3Q8IZI9 196 aa4.85□□□□□ -1.63
HMGB1P41-201ENST00000520234 LZTR1Q8N653 840 aa4.85□□□□□ -1.63
HMGB1P41-201ENST00000520234 RCBTB1Q8NDN9 531 aa4.85□□□□□ -1.63
HMGB1P41-201ENST00000520234 NUP43Q8NFH3 380 aa4.85□□□□□ -1.63
HMGB1P41-201ENST00000520234 PLCD4Q9BRC7 762 aa4.85□□□□□ -1.63
HMGB1P41-201ENST00000520234 RNF32Q9H0A6 362 aa4.85□□□□□ -1.63
HMGB1P41-201ENST00000520234 SLC6A17Q9H1V8 727 aa4.85□□□□□ -1.63
HMGB1P41-201ENST00000520234 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.85□□□□□ -1.63
HMGB1P41-201ENST00000520234 TMEFF2Q9UIK5 374 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P41-201ENST00000520234 KCTD3Q9Y597 815 aa4.85□□□□□ -1.63
HMGB1P41-201ENST00000520234 ESYT3A0FGR9 886 aa4.84□□□□□ -1.63
HMGB1P41-201ENST00000520234 PLD2O14939 933 aa4.84□□□□□ -1.63
HMGB1P41-201ENST00000520234 KCNQ2O43526 872 aa4.84□□□□□ -1.63
HMGB1P41-201ENST00000520234 CDC45O75419 566 aa4.84□□□□□ -1.63
HMGB1P41-201ENST00000520234 MVKQ03426 396 aa4.84□□□□□ -1.63
HMGB1P41-201ENST00000520234 LSAMPQ13449 338 aa4.84□□□□□ -1.63
HMGB1P41-201ENST00000520234 TCEA2Q15560 299 aa4.84□□□□□ -1.63
HMGB1P41-201ENST00000520234 TRIM61Q5EBN2 209 aa4.84□□□□□ -1.63
HMGB1P41-201ENST00000520234 MBLAC2Q68D91 279 aa4.84□□□□□ -1.63
HMGB1P41-201ENST00000520234 IRF2BP1Q8IU81 584 aa4.84□□□□□ -1.63
HMGB1P41-201ENST00000520234 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.84□□□□□ -1.63
HMGB1P41-201ENST00000520234 PHF20Q9BVI0 1012 aa4.84□□□□□ -1.63
HMGB1P41-201ENST00000520234 KANSL2Q9H9L4 492 aa4.84□□□□□ -1.63
HMGB1P41-201ENST00000520234 NCOA5Q9HCD5 579 aaKnown RBP4.84□□□□□ -1.63
HMGB1P41-201ENST00000520234 FANCLQ9NW38 375 aa4.84□□□□□ -1.63
HMGB1P41-201ENST00000520234 BLACEA4D250 179 aa4.83□□□□□ -1.64
HMGB1P41-201ENST00000520234 H7BY64 318 aa4.83□□□□□ -1.64
HMGB1P41-201ENST00000520234 RFPL3O75679 317 aa4.83□□□□□ -1.64
HMGB1P41-201ENST00000520234 MPOP05164 745 aa4.83□□□□□ -1.64
HMGB1P41-201ENST00000520234 C6orf222P0C671 652 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P41-201ENST00000520234 ERVFRD-1P60508 538 aa4.83□□□□□ -1.64
HMGB1P41-201ENST00000520234 KIZQ2M2Z5 673 aa4.83□□□□□ -1.64
HMGB1P41-201ENST00000520234 FNDC3BQ53EP0 1204 aaKnown RBP4.83□□□□□ -1.64
HMGB1P41-201ENST00000520234 SDE2Q6IQ49 451 aa4.83□□□□□ -1.64
HMGB1P41-201ENST00000520234 LBX2Q6XYB7 198 aa4.83□□□□□ -1.64
HMGB1P41-201ENST00000520234 CABP7Q86V35 215 aa4.83□□□□□ -1.64
HMGB1P41-201ENST00000520234 Q8N1Y9 231 aa4.83□□□□□ -1.64
HMGB1P41-201ENST00000520234 USP33Q8TEY7 942 aa4.83□□□□□ -1.64
HMGB1P41-201ENST00000520234 DPF3Q92784 378 aa4.83□□□□□ -1.64
HMGB1P41-201ENST00000520234 INTS4Q96HW7 963 aaKnown RBP4.83□□□□□ -1.64
HMGB1P41-201ENST00000520234 SORCS2Q96PQ0 1159 aa4.83□□□□□ -1.64
HMGB1P41-201ENST00000520234 MTA3Q9BTC8 594 aa4.83□□□□□ -1.64
HMGB1P41-201ENST00000520234 MENTQ9BUN1 341 aa4.83□□□□□ -1.64
HMGB1P41-201ENST00000520234 MCOLN1Q9GZU1 580 aa4.83□□□□□ -1.64
HMGB1P41-201ENST00000520234 GULP1Q9UBP9 304 aa4.83□□□□□ -1.64
HMGB1P41-201ENST00000520234 PCDHA2Q9Y5H9 948 aa4.83□□□□□ -1.64
HMGB1P41-201ENST00000520234 ABLIM1O14639 778 aa4.82□□□□□ -1.64
HMGB1P41-201ENST00000520234 SRGAP3O43295 1099 aa4.82□□□□□ -1.64
HMGB1P41-201ENST00000520234 PEX10O60683 326 aa4.82□□□□□ -1.64
HMGB1P41-201ENST00000520234 PPP1R11O60927 126 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P41-201ENST00000520234 CLSTN1O94985 981 aa4.82□□□□□ -1.64
HMGB1P41-201ENST00000520234 ASMTLO95671 621 aa4.82□□□□□ -1.64
HMGB1P41-201ENST00000520234 EFEMP2O95967 443 aa4.82□□□□□ -1.64
HMGB1P41-201ENST00000520234 FUCA1P04066 466 aa4.82□□□□□ -1.64
HMGB1P41-201ENST00000520234 MSL3P1P0C860 447 aa4.82□□□□□ -1.64
HMGB1P41-201ENST00000520234 LCP1P13796 627 aa4.82□□□□□ -1.64
HMGB1P41-201ENST00000520234 TNFRSF1AP19438 455 aa4.82□□□□□ -1.64
HMGB1P41-201ENST00000520234 HSD3B2P26439 372 aa4.82□□□□□ -1.64
HMGB1P41-201ENST00000520234 BCL6P41182 706 aa4.82□□□□□ -1.64
HMGB1P41-201ENST00000520234 TMEM62Q0P6H9 643 aa4.82□□□□□ -1.64
HMGB1P41-201ENST00000520234 NR1I3Q14994 352 aa4.82□□□□□ -1.64
HMGB1P41-201ENST00000520234 PLEKHG4Q58EX7 1191 aa4.82□□□□□ -1.64
HMGB1P41-201ENST00000520234 TAF7LQ5H9L4 462 aa4.82□□□□□ -1.64
HMGB1P41-201ENST00000520234 BICRALQ6AI39 1079 aa4.82□□□□□ -1.64
HMGB1P41-201ENST00000520234 KCNT2Q6UVM3 1135 aa4.82□□□□□ -1.64
HMGB1P41-201ENST00000520234 RIOX2Q8IUF8 465 aa4.82□□□□□ -1.64
HMGB1P41-201ENST00000520234 NLGN1Q8N2Q7 840 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms