RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 IDH3AP50213 366 aa5.78□□□□□ -1.48
SDC2-204ENST00000519914 TPM4P67936 248 aa5.78□□□□□ -1.48
SDC2-204ENST00000519914 CHRNDQ07001 517 aa5.78□□□□□ -1.48
SDC2-204ENST00000519914 SSRP1Q08945 709 aaKnown RBP5.78□□□□□ -1.48
SDC2-204ENST00000519914 CHAF1AQ13111 956 aaPredicted RBP5.78□□□□□ -1.48
SDC2-204ENST00000519914 SART3Q15020 963 aaKnown RBP5.78□□□□□ -1.48
SDC2-204ENST00000519914 SF3A1Q15459 793 aaKnown RBP5.78□□□□□ -1.48
SDC2-204ENST00000519914 DDB1Q16531 1140 aa5.78□□□□□ -1.48
SDC2-204ENST00000519914 RILPL1Q5EBL4 403 aa5.78□□□□□ -1.48
SDC2-204ENST00000519914 OTUD7BQ6GQQ9 843 aa5.78□□□□□ -1.48
SDC2-204ENST00000519914 MFSD6Q6ZSS7 791 aa5.78□□□□□ -1.48
SDC2-204ENST00000519914 FBXO33Q7Z6M2 555 aa5.78□□□□□ -1.48
SDC2-204ENST00000519914 NOSTRINQ8IVI9 506 aa5.78□□□□□ -1.48
SDC2-204ENST00000519914 C17orf53Q8N3J3 647 aaPredicted RBP5.78□□□□□ -1.48
SDC2-204ENST00000519914 LCORLQ8N3X6 602 aa5.78□□□□□ -1.48
SDC2-204ENST00000519914 CRACR2BQ8N4Y2 399 aaPredicted RBP5.78□□□□□ -1.48
SDC2-204ENST00000519914 AOPEPQ8N6M6 819 aa5.78□□□□□ -1.48
SDC2-204ENST00000519914 TRIML1Q8N9V2 468 aa5.78□□□□□ -1.48
SDC2-204ENST00000519914 MARCH10Q8NA82 808 aaPredicted RBP5.78□□□□□ -1.48
SDC2-204ENST00000519914 SPATA20Q8TB22 786 aa5.78□□□□□ -1.48
SDC2-204ENST00000519914 MPHOSPH8Q99549 860 aa5.78□□□□□ -1.48
SDC2-204ENST00000519914 SDF4Q9BRK5 362 aa5.78□□□□□ -1.48
SDC2-204ENST00000519914 RIOK1Q9BRS2 568 aaKnown RBP5.78□□□□□ -1.48
SDC2-204ENST00000519914 HSD3B7Q9H2F3 369 aa5.78□□□□□ -1.48
SDC2-204ENST00000519914 SEC31BQ9NQW1 1179 aa5.78□□□□□ -1.48
SDC2-204ENST00000519914 NRBP1Q9UHY1 535 aa5.78□□□□□ -1.48
SDC2-204ENST00000519914 DENND2AQ9ULE3 1009 aa5.78□□□□□ -1.48
SDC2-204ENST00000519914 SLC12A7Q9Y666 1083 aa5.78□□□□□ -1.48
SDC2-204ENST00000519914 SBF2Q86WG5 1849 aa5.78□□□□□ -1.48
SDC2-204ENST00000519914 IRS2Q9Y4H2 1338 aa5.78□□□□□ -1.48
SDC2-204ENST00000519914 BTAF1O14981 1849 aa5.77□□□□□ -1.48
SDC2-204ENST00000519914 CCDC69A6NI79 296 aa5.77□□□□□ -1.49
SDC2-204ENST00000519914 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.77□□□□□ -1.49
SDC2-204ENST00000519914 ZBTB42B2RXF5 422 aa5.77□□□□□ -1.49
SDC2-204ENST00000519914 IFIT3O14879 490 aaKnown RBP5.77□□□□□ -1.49
SDC2-204ENST00000519914 PRPF3O43395 683 aaKnown RBP5.77□□□□□ -1.49
SDC2-204ENST00000519914 CBFA2T2O43439 604 aa5.77□□□□□ -1.49
SDC2-204ENST00000519914 ORC4O43929 436 aa5.77□□□□□ -1.49
SDC2-204ENST00000519914 DDAH1O94760 285 aa5.77□□□□□ -1.49
SDC2-204ENST00000519914 BMP15O95972 392 aa5.77□□□□□ -1.49
SDC2-204ENST00000519914 H2AFB1P0C5Y9 115 aa5.77□□□□□ -1.49
SDC2-204ENST00000519914 H2AFB2P0C5Z0 115 aa5.77□□□□□ -1.49
SDC2-204ENST00000519914 GRNP28799 593 aaKnown RBP5.77□□□□□ -1.49
SDC2-204ENST00000519914 IREB2P48200 963 aaKnown RBP5.77□□□□□ -1.49
SDC2-204ENST00000519914 TOB1P50616 345 aaPredicted RBP5.77□□□□□ -1.49
SDC2-204ENST00000519914 PPARAQ07869 468 aa5.77□□□□□ -1.49
SDC2-204ENST00000519914 LRMPQ12912 555 aa5.77□□□□□ -1.49
SDC2-204ENST00000519914 DGKZQ13574 1117 aa5.77□□□□□ -1.49
SDC2-204ENST00000519914 TRIM29Q14134 588 aa5.77□□□□□ -1.49
SDC2-204ENST00000519914 WTAPQ15007 396 aa5.77□□□□□ -1.49
SDC2-204ENST00000519914 DPCR1Q3MIW9 517 aa5.77□□□□□ -1.49
SDC2-204ENST00000519914 DNTTIP2Q5QJE6 756 aaKnown RBP5.77□□□□□ -1.49
SDC2-204ENST00000519914 PERM1Q5SV97 790 aa5.77□□□□□ -1.49
SDC2-204ENST00000519914 MSL1Q68DK7 614 aa5.77□□□□□ -1.49
SDC2-204ENST00000519914 ELMSAN1Q6PJG2 1045 aa5.77□□□□□ -1.49
SDC2-204ENST00000519914 KRBA2Q6ZNG9 492 aa5.77□□□□□ -1.49
SDC2-204ENST00000519914 MICU3Q86XE3 530 aa5.77□□□□□ -1.49
SDC2-204ENST00000519914 DRC7Q8IY82 874 aa5.77□□□□□ -1.49
SDC2-204ENST00000519914 FAM177A1Q8N128 213 aaPredicted RBP5.77□□□□□ -1.49
SDC2-204ENST00000519914 STK11IPQ8N1F8 1099 aa5.77□□□□□ -1.49
SDC2-204ENST00000519914 KRTAP9-2Q9BYQ4 174 aa5.77□□□□□ -1.49
SDC2-204ENST00000519914 TSPYL1Q9H0U9 437 aa5.77□□□□□ -1.49
SDC2-204ENST00000519914 TMX1Q9H3N1 280 aa5.77□□□□□ -1.49
SDC2-204ENST00000519914 ARMT1Q9H993 441 aa5.77□□□□□ -1.49
SDC2-204ENST00000519914 GNL3LQ9NVN8 582 aaKnown RBP5.77□□□□□ -1.49
SDC2-204ENST00000519914 RBM28Q9NW13 759 aaKnown RBP5.77□□□□□ -1.49
SDC2-204ENST00000519914 AATFQ9NY61 560 aaKnown RBP eCLIP5.77□□□□□ -1.49
SDC2-204ENST00000519914 ZFATQ9P243 1243 aa5.77□□□□□ -1.49
SDC2-204ENST00000519914 DMGDHQ9UI17 866 aaKnown RBP5.77□□□□□ -1.49
SDC2-204ENST00000519914 FBXO2Q9UK22 296 aaPredicted RBP5.77□□□□□ -1.49
SDC2-204ENST00000519914 USP20Q9Y2K6 914 aa5.77□□□□□ -1.49
SDC2-204ENST00000519914 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.77□□□□□ -1.49
SDC2-204ENST00000519914 SRPRBQ9Y5M8 271 aaKnown RBP5.77□□□□□ -1.49
SDC2-204ENST00000519914 TAF1P21675 1872 aa5.77□□□□□ -1.49
SDC2-204ENST00000519914 DDX60LQ5H9U9 1706 aaKnown RBP5.77□□□□□ -1.49
SDC2-204ENST00000519914 CDK5RAP2Q96SN8 1893 aa5.76□□□□□ -1.49
SDC2-204ENST00000519914 TNRC6CQ9HCJ0 1690 aaKnown RBP5.76□□□□□ -1.49
SDC2-204ENST00000519914 ROBO3Q96MS0 1386 aa5.76□□□□□ -1.49
SDC2-204ENST00000519914 ERICH2A1L162 156 aa5.76□□□□□ -1.49
SDC2-204ENST00000519914 CLGNO14967 610 aa5.76□□□□□ -1.49
SDC2-204ENST00000519914 PRKAB2O43741 272 aa5.76□□□□□ -1.49
SDC2-204ENST00000519914 APPP05067 770 aa5.76□□□□□ -1.49
SDC2-204ENST00000519914 CALM1P0DP23 149 aa5.76□□□□□ -1.49
SDC2-204ENST00000519914 CALM2P0DP24 149 aa5.76□□□□□ -1.49
SDC2-204ENST00000519914 CALM3P0DP25 149 aa5.76□□□□□ -1.49
SDC2-204ENST00000519914 RARAP10276 462 aa5.76□□□□□ -1.49
SDC2-204ENST00000519914 TNNT1P13805 278 aa5.76□□□□□ -1.49
SDC2-204ENST00000519914 EPB42P16452 691 aa5.76□□□□□ -1.49
SDC2-204ENST00000519914 ZNF18P17022 549 aa5.76□□□□□ -1.49
SDC2-204ENST00000519914 CDK11BP21127 795 aaKnown RBP5.76□□□□□ -1.49
SDC2-204ENST00000519914 TDO2P48775 406 aa5.76□□□□□ -1.49
SDC2-204ENST00000519914 MYL5Q02045 173 aa5.76□□□□□ -1.49
SDC2-204ENST00000519914 PTK7Q13308 1070 aa5.76□□□□□ -1.49
SDC2-204ENST00000519914 SAFBQ15424 915 aaKnown RBP eCLIP5.76□□□□□ -1.49
SDC2-204ENST00000519914 PKN1Q16512 942 aa5.76□□□□□ -1.49
SDC2-204ENST00000519914 SBK1Q52WX2 424 aa5.76□□□□□ -1.49
SDC2-204ENST00000519914 IER5Q5VY09 327 aa5.76□□□□□ -1.49
SDC2-204ENST00000519914 NFXL1Q6ZNB6 911 aa5.76□□□□□ -1.49
SDC2-204ENST00000519914 METTL16Q86W50 562 aaKnown RBP5.76□□□□□ -1.49
SDC2-204ENST00000519914 ANKRD18AQ8IVF6 992 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms