RNA–Protein interactions for RNA: ENST00000519054.5

SKP1-205, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-205ENST00000519054 CLDND1Q9NY35 253 aa5.73□□□□□ -1.49
SKP1-205ENST00000519054 IRS4O14654 1257 aaPredicted RBP5.72□□□□□ -1.49
SKP1-205ENST00000519054 FAM153BP0C7A2 387 aa5.72□□□□□ -1.49
SKP1-205ENST00000519054 FBLN1P23142 703 aa5.72□□□□□ -1.49
SKP1-205ENST00000519054 FAM209AQ5JX71 171 aa5.72□□□□□ -1.49
SKP1-205ENST00000519054 MROH9Q5TGP6 573 aa5.72□□□□□ -1.49
SKP1-205ENST00000519054 FOXB2Q5VYV0 432 aa5.72□□□□□ -1.49
SKP1-205ENST00000519054 LRP10Q7Z4F1 713 aa5.72□□□□□ -1.49
SKP1-205ENST00000519054 C1QL4Q86Z23 238 aa5.72□□□□□ -1.49
SKP1-205ENST00000519054 Q8N1Y9 231 aa5.72□□□□□ -1.49
SKP1-205ENST00000519054 DCAF4Q8WV16 495 aa5.72□□□□□ -1.49
SKP1-205ENST00000519054 AP5M1Q9H0R1 490 aa5.72□□□□□ -1.49
SKP1-205ENST00000519054 OSBPL2Q9H1P3 480 aa5.72□□□□□ -1.49
SKP1-205ENST00000519054 GPR27Q9NS67 375 aa5.72□□□□□ -1.49
SKP1-205ENST00000519054 COA3Q9Y2R0 106 aaPredicted RBP5.72□□□□□ -1.49
SKP1-205ENST00000519054 X6R8D5 127 aa5.72□□□□□ -1.49
SKP1-205ENST00000519054 IRS2Q9Y4H2 1338 aa5.72□□□□□ -1.49
SKP1-205ENST00000519054 TRBV23-1A0A0A0MS06 115 aa5.71□□□□□ -1.5
SKP1-205ENST00000519054 RFXAPO00287 272 aa5.71□□□□□ -1.5
SKP1-205ENST00000519054 SGSM2O43147 1006 aa5.71□□□□□ -1.5
SKP1-205ENST00000519054 ZBTB7AO95365 584 aa5.71□□□□□ -1.5
SKP1-205ENST00000519054 ASGR2P07307 311 aa5.71□□□□□ -1.5
SKP1-205ENST00000519054 PFKLP17858 780 aa5.71□□□□□ -1.5
SKP1-205ENST00000519054 PMLP29590 882 aa5.71□□□□□ -1.5
SKP1-205ENST00000519054 MC3RP41968 323 aa5.71□□□□□ -1.5
SKP1-205ENST00000519054 LIMS1P48059 325 aa5.71□□□□□ -1.5
SKP1-205ENST00000519054 BMS1Q14692 1282 aaKnown RBP5.71□□□□□ -1.5
SKP1-205ENST00000519054 SLC9A5Q14940 896 aa5.71□□□□□ -1.5
SKP1-205ENST00000519054 TARBP2Q15633 366 aaKnown RBP5.71□□□□□ -1.5
SKP1-205ENST00000519054 ZNF385BQ569K4 471 aa5.71□□□□□ -1.5
SKP1-205ENST00000519054 RIOX2Q8IUF8 465 aa5.71□□□□□ -1.5
SKP1-205ENST00000519054 SCUBE1Q8IWY4 988 aa5.71□□□□□ -1.5
SKP1-205ENST00000519054 TMEFF1Q8IYR6 380 aa5.71□□□□□ -1.5
SKP1-205ENST00000519054 ZSCAN18Q8TBC5 510 aaPredicted RBP5.71□□□□□ -1.5
SKP1-205ENST00000519054 MKL1Q969V6 931 aa5.71□□□□□ -1.5
SKP1-205ENST00000519054 IPO9Q96P70 1041 aaKnown RBP5.71□□□□□ -1.5
SKP1-205ENST00000519054 EPB41L4AQ9HCS5 686 aaPredicted RBP5.71□□□□□ -1.5
SKP1-205ENST00000519054 PPARGC1AQ9UBK2 798 aaKnown RBP5.71□□□□□ -1.5
SKP1-205ENST00000519054 H7BY64 318 aa5.7□□□□□ -1.5
SKP1-205ENST00000519054 NCAM1P13591 858 aa5.7□□□□□ -1.5
SKP1-205ENST00000519054 ATF2P15336 505 aa5.7□□□□□ -1.5
SKP1-205ENST00000519054 IGFBP6P24592 240 aaPredicted RBP5.7□□□□□ -1.5
SKP1-205ENST00000519054 FZD5Q13467 585 aa5.7□□□□□ -1.5
SKP1-205ENST00000519054 STYK1Q6J9G0 422 aa5.7□□□□□ -1.5
SKP1-205ENST00000519054 CNKSR3Q6P9H4 555 aa5.7□□□□□ -1.5
SKP1-205ENST00000519054 RSPO2Q6UXX9 243 aaPredicted RBP5.7□□□□□ -1.5
SKP1-205ENST00000519054 KRTAP1-3Q8IUG1 177 aa5.7□□□□□ -1.5
SKP1-205ENST00000519054 SEC14L1Q92503 715 aa5.7□□□□□ -1.5
SKP1-205ENST00000519054 UBXN4Q92575 508 aa5.7□□□□□ -1.5
SKP1-205ENST00000519054 EXOC2Q96KP1 924 aa5.7□□□□□ -1.5
SKP1-205ENST00000519054 RNF38Q9H0F5 515 aa5.7□□□□□ -1.5
SKP1-205ENST00000519054 PALD1Q9ULE6 856 aa5.7□□□□□ -1.5
SKP1-205ENST00000519054 FAN1Q9Y2M0 1017 aa5.7□□□□□ -1.5
SKP1-205ENST00000519054 TRAF6Q9Y4K3 522 aa5.7□□□□□ -1.5
SKP1-205ENST00000519054 ASXL2Q76L83 1435 aa5.7□□□□□ -1.5
SKP1-205ENST00000519054 SLC6A11P48066 632 aa5.69□□□□□ -1.5
SKP1-205ENST00000519054 SUMO1P63165 101 aaKnown RBP5.69□□□□□ -1.5
SKP1-205ENST00000519054 LBX2Q6XYB7 198 aa5.69□□□□□ -1.5
SKP1-205ENST00000519054 MILR1Q7Z6M3 343 aa5.69□□□□□ -1.5
SKP1-205ENST00000519054 FAM129CQ86XR2 697 aa5.69□□□□□ -1.5
SKP1-205ENST00000519054 PWWP2AQ96N64 755 aa5.69□□□□□ -1.5
SKP1-205ENST00000519054 JAM3Q9BX67 310 aa5.69□□□□□ -1.5
SKP1-205ENST00000519054 CDIP1Q9H305 208 aa5.69□□□□□ -1.5
SKP1-205ENST00000519054 EPB41L1Q9H4G0 881 aa5.69□□□□□ -1.5
SKP1-205ENST00000519054 CDK11AQ9UQ88 783 aaPredicted RBP5.69□□□□□ -1.5
SKP1-205ENST00000519054 DGKIO75912 1065 aa5.68□□□□□ -1.5
SKP1-205ENST00000519054 ZSCAN22P10073 491 aaPredicted RBP5.68□□□□□ -1.5
SKP1-205ENST00000519054 GPR85P60893 370 aa5.68□□□□□ -1.5
SKP1-205ENST00000519054 FOXO4P98177 505 aa5.68□□□□□ -1.5
SKP1-205ENST00000519054 STEAP3Q658P3 488 aa5.68□□□□□ -1.5
SKP1-205ENST00000519054 LCNL1Q6ZST4 164 aa5.68□□□□□ -1.5
SKP1-205ENST00000519054 AMIGO3Q86WK7 504 aa5.68□□□□□ -1.5
SKP1-205ENST00000519054 IFNL3Q8IZI9 196 aa5.68□□□□□ -1.5
SKP1-205ENST00000519054 ZFYVE21Q9BQ24 234 aa5.68□□□□□ -1.5
SKP1-205ENST00000519054 DHRS4Q9BTZ2 278 aa5.68□□□□□ -1.5
SKP1-205ENST00000519054 LNPKQ9C0E8 428 aa5.68□□□□□ -1.5
SKP1-205ENST00000519054 ZSWIM4Q9H7M6 989 aa5.68□□□□□ -1.5
SKP1-205ENST00000519054 MRPS23Q9Y3D9 190 aaKnown RBP5.68□□□□□ -1.5
SKP1-205ENST00000519054 C6orf222P0C671 652 aaPredicted RBP5.67□□□□□ -1.5
SKP1-205ENST00000519054 GRK2P25098 689 aa5.67□□□□□ -1.5
SKP1-205ENST00000519054 GRK3P35626 688 aa5.67□□□□□ -1.5
SKP1-205ENST00000519054 AFF3P51826 1226 aaKnown RBP5.67□□□□□ -1.5
SKP1-205ENST00000519054 CHRNA2Q15822 529 aa5.67□□□□□ -1.5
SKP1-205ENST00000519054 NFE2L2Q16236 605 aa5.67□□□□□ -1.5
SKP1-205ENST00000519054 LONRF2Q1L5Z9 754 aa5.67□□□□□ -1.5
SKP1-205ENST00000519054 KIZQ2M2Z5 673 aa5.67□□□□□ -1.5
SKP1-205ENST00000519054 VMACQ2NL98 169 aa5.67□□□□□ -1.5
SKP1-205ENST00000519054 CCDC144BQ3MJ40 725 aa5.67□□□□□ -1.5
SKP1-205ENST00000519054 TCERG1LQ5VWI1 586 aa5.67□□□□□ -1.5
SKP1-205ENST00000519054 DPH6Q7L8W6 267 aa5.67□□□□□ -1.5
SKP1-205ENST00000519054 LILRB2Q8N423 598 aa5.67□□□□□ -1.5
SKP1-205ENST00000519054 SMARCC2Q8TAQ2 1214 aa5.67□□□□□ -1.5
SKP1-205ENST00000519054 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.67□□□□□ -1.5
SKP1-205ENST00000519054 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.67□□□□□ -1.5
SKP1-205ENST00000519054 DACT3Q96B18 629 aaPredicted RBP5.67□□□□□ -1.5
SKP1-205ENST00000519054 KCNJ15Q99712 375 aa5.67□□□□□ -1.5
SKP1-205ENST00000519054 HGSO14964 777 aaPredicted RBP5.66□□□□□ -1.5
SKP1-205ENST00000519054 PLA2G1BP04054 148 aaKnown RBP5.66□□□□□ -1.5
SKP1-205ENST00000519054 SOD2P04179 222 aa5.66□□□□□ -1.5
SKP1-205ENST00000519054 CACNB2Q08289 660 aaPredicted RBP5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms