RNA–Protein interactions for RNA: ENST00000518825.5

CTNNA1-210, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-210ENST00000518825 NOL4O94818 638 aa9.41□□□□□ -0.9
CTNNA1-210ENST00000518825 CYLC1P35663 651 aaPredicted RBP9.41□□□□□ -0.9
CTNNA1-210ENST00000518825 EIF4A3P38919 411 aaKnown RBP9.41□□□□□ -0.9
CTNNA1-210ENST00000518825 IRX5P78411 483 aaPredicted RBP9.41□□□□□ -0.9
CTNNA1-210ENST00000518825 MRPS25P82663 173 aaKnown RBP9.41□□□□□ -0.9
CTNNA1-210ENST00000518825 MUM1L1Q5H9M0 696 aa9.41□□□□□ -0.9
CTNNA1-210ENST00000518825 C2CD5Q86YS7 1000 aa9.41□□□□□ -0.9
CTNNA1-210ENST00000518825 CERS5Q8N5B7 392 aa9.41□□□□□ -0.9
CTNNA1-210ENST00000518825 SH2D4AQ9H788 454 aa9.41□□□□□ -0.9
CTNNA1-210ENST00000518825 CALCOCO1Q9P1Z2 691 aa9.41□□□□□ -0.9
CTNNA1-210ENST00000518825 LCMT1Q9UIC8 334 aa9.41□□□□□ -0.9
CTNNA1-210ENST00000518825 HPCAL4Q9UM19 191 aa9.41□□□□□ -0.9
CTNNA1-210ENST00000518825 PCDHA13Q9Y5I0 950 aa9.41□□□□□ -0.9
CTNNA1-210ENST00000518825 ARFGEF1Q9Y6D6 1849 aa9.41□□□□□ -0.9
CTNNA1-210ENST00000518825 MYH10P35580 1976 aa9.41□□□□□ -0.9
CTNNA1-210ENST00000518825 PVALEFA0A1B0GWK0 134 aa9.4□□□□□ -0.9
CTNNA1-210ENST00000518825 TLR2O60603 784 aa9.4□□□□□ -0.9
CTNNA1-210ENST00000518825 MOCS3O95396 460 aa9.4□□□□□ -0.9
CTNNA1-210ENST00000518825 IDEP14735 1019 aa9.4□□□□□ -0.9
CTNNA1-210ENST00000518825 RAD51AP2Q09MP3 1159 aa9.4□□□□□ -0.9
CTNNA1-210ENST00000518825 ADGRF4Q8IZF3 695 aa9.4□□□□□ -0.9
CTNNA1-210ENST00000518825 GUF1Q8N442 669 aaKnown RBP9.4□□□□□ -0.9
CTNNA1-210ENST00000518825 CALML4Q96GE6 196 aa9.4□□□□□ -0.9
CTNNA1-210ENST00000518825 TRERF1Q96PN7 1200 aa9.4□□□□□ -0.9
CTNNA1-210ENST00000518825 MXD3Q9BW11 206 aa9.4□□□□□ -0.9
CTNNA1-210ENST00000518825 ANO9A1A5B4 782 aa9.4□□□□□ -0.9
CTNNA1-210ENST00000518825 AARSP49588 968 aaKnown RBP eCLIP9.4□□□□□ -0.9
CTNNA1-210ENST00000518825 KIF11P52732 1056 aa9.4□□□□□ -0.9
CTNNA1-210ENST00000518825 PDIA5Q14554 519 aa9.4□□□□□ -0.9
CTNNA1-210ENST00000518825 ZSCAN26Q16670 478 aa9.4□□□□□ -0.9
CTNNA1-210ENST00000518825 SHROOM1Q2M3G4 852 aaPredicted RBP9.4□□□□□ -0.9
CTNNA1-210ENST00000518825 TSR1Q2NL82 804 aaKnown RBP9.4□□□□□ -0.9
CTNNA1-210ENST00000518825 SOGA3Q5TF21 947 aa9.4□□□□□ -0.9
CTNNA1-210ENST00000518825 PCMTD1Q96MG8 357 aaPredicted RBP9.4□□□□□ -0.9
CTNNA1-210ENST00000518825 KANSL2Q9H9L4 492 aa9.4□□□□□ -0.9
CTNNA1-210ENST00000518825 ZNF287Q9HBT7 754 aa9.4□□□□□ -0.9
CTNNA1-210ENST00000518825 GPCPD1Q9NPB8 672 aa9.4□□□□□ -0.9
CTNNA1-210ENST00000518825 SNX12Q9UMY4 172 aa9.4□□□□□ -0.9
CTNNA1-210ENST00000518825 PCDHA2Q9Y5H9 948 aa9.4□□□□□ -0.9
CTNNA1-210ENST00000518825 TARSL2A2RTX5 802 aaKnown RBP9.4□□□□□ -0.91
CTNNA1-210ENST00000518825 GYS1P13807 737 aa9.4□□□□□ -0.91
CTNNA1-210ENST00000518825 SLC16A2P36021 539 aa9.4□□□□□ -0.91
CTNNA1-210ENST00000518825 ADCY7P51828 1080 aa9.4□□□□□ -0.91
CTNNA1-210ENST00000518825 AMPD3Q01432 767 aa9.4□□□□□ -0.91
CTNNA1-210ENST00000518825 ORC2Q13416 577 aaPredicted RBP9.4□□□□□ -0.91
CTNNA1-210ENST00000518825 PICALMQ13492 652 aa9.4□□□□□ -0.91
CTNNA1-210ENST00000518825 CCNI2Q6ZMN8 369 aaPredicted RBP9.4□□□□□ -0.91
CTNNA1-210ENST00000518825 FAM114A1Q8IWE2 563 aa9.4□□□□□ -0.91
CTNNA1-210ENST00000518825 PLCD3Q8N3E9 789 aa9.4□□□□□ -0.91
CTNNA1-210ENST00000518825 SECISBP2LQ93073 1101 aaKnown RBP9.4□□□□□ -0.91
CTNNA1-210ENST00000518825 NGLY1Q96IV0 654 aa9.4□□□□□ -0.91
CTNNA1-210ENST00000518825 CCDC42Q96M95 316 aa9.4□□□□□ -0.91
CTNNA1-210ENST00000518825 STK17AQ9UEE5 414 aa9.4□□□□□ -0.91
CTNNA1-210ENST00000518825 GGA1Q9UJY5 639 aa9.4□□□□□ -0.91
CTNNA1-210ENST00000518825 NFRKBQ6P4R8 1299 aa9.39□□□□□ -0.91
CTNNA1-210ENST00000518825 DPP8Q6V1X1 898 aaPredicted RBP9.39□□□□□ -0.91
CTNNA1-210ENST00000518825 ANKRD13CQ8N6S4 541 aa9.39□□□□□ -0.91
CTNNA1-210ENST00000518825 SNX29Q8TEQ0 813 aa9.39□□□□□ -0.91
CTNNA1-210ENST00000518825 MTMR8Q96EF0 704 aa9.39□□□□□ -0.91
CTNNA1-210ENST00000518825 P2RX7Q99572 595 aaKnown RBP9.39□□□□□ -0.91
CTNNA1-210ENST00000518825 IFIH1Q9BYX4 1025 aaKnown RBP9.39□□□□□ -0.91
CTNNA1-210ENST00000518825 JADE2Q9NQC1 790 aa9.39□□□□□ -0.91
CTNNA1-210ENST00000518825 ZNHIT6Q9NWK9 470 aaKnown RBP9.39□□□□□ -0.91
CTNNA1-210ENST00000518825 DMGDHQ9UI17 866 aaKnown RBP9.39□□□□□ -0.91
CTNNA1-210ENST00000518825 NPHP3-ACAD11A0A0J9YXS1 232 aa9.39□□□□□ -0.91
CTNNA1-210ENST00000518825 NCK2O43639 380 aa9.39□□□□□ -0.91
CTNNA1-210ENST00000518825 ATP2B4P23634 1241 aa9.39□□□□□ -0.91
CTNNA1-210ENST00000518825 CXCR5P32302 372 aa9.39□□□□□ -0.91
CTNNA1-210ENST00000518825 GFPT1Q06210 699 aaPredicted RBP9.39□□□□□ -0.91
CTNNA1-210ENST00000518825 KIF5AQ12840 1032 aa9.39□□□□□ -0.91
CTNNA1-210ENST00000518825 MAN2A1Q16706 1144 aa9.39□□□□□ -0.91
CTNNA1-210ENST00000518825 RRAGAQ7L523 313 aa9.39□□□□□ -0.91
CTNNA1-210ENST00000518825 ZNF572Q7Z3I7 529 aaPredicted RBP9.39□□□□□ -0.91
CTNNA1-210ENST00000518825 DRC1Q96MC2 740 aa9.39□□□□□ -0.91
CTNNA1-210ENST00000518825 MMRN2Q9H8L6 949 aa9.39□□□□□ -0.91
CTNNA1-210ENST00000518825 VIPAS39Q9H9C1 493 aa9.39□□□□□ -0.91
CTNNA1-210ENST00000518825 RIC8AQ9NPQ8 531 aa9.39□□□□□ -0.91
CTNNA1-210ENST00000518825 GREB1LQ9C091 1923 aaPredicted RBP9.39□□□□□ -0.91
CTNNA1-210ENST00000518825 UBR3Q6ZT12 1888 aa9.39□□□□□ -0.91
CTNNA1-210ENST00000518825 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.39□□□□□ -0.91
CTNNA1-210ENST00000518825 SHMT1P34896 483 aa9.39□□□□□ -0.91
CTNNA1-210ENST00000518825 ZNF543Q08ER8 600 aa9.39□□□□□ -0.91
CTNNA1-210ENST00000518825 CCDC96Q2M329 555 aa9.39□□□□□ -0.91
CTNNA1-210ENST00000518825 FKBP15Q5T1M5 1219 aa9.39□□□□□ -0.91
CTNNA1-210ENST00000518825 PPP4R3AQ6IN85 833 aa9.39□□□□□ -0.91
CTNNA1-210ENST00000518825 FNBP4Q8N3X1 1017 aaPredicted RBP9.39□□□□□ -0.91
CTNNA1-210ENST00000518825 RPGRQ92834 1020 aaKnown RBP9.39□□□□□ -0.91
CTNNA1-210ENST00000518825 CCDC102AQ96A19 550 aa9.39□□□□□ -0.91
CTNNA1-210ENST00000518825 PSMB7Q99436 277 aa9.39□□□□□ -0.91
CTNNA1-210ENST00000518825 LRRC1Q9BTT6 524 aa9.39□□□□□ -0.91
CTNNA1-210ENST00000518825 USP17L10C9JJH3 530 aa9.38□□□□□ -0.91
CTNNA1-210ENST00000518825 ACTN2P35609 894 aa9.38□□□□□ -0.91
CTNNA1-210ENST00000518825 TNNI2P48788 182 aa9.38□□□□□ -0.91
CTNNA1-210ENST00000518825 GTF2IP78347 998 aa9.38□□□□□ -0.91
CTNNA1-210ENST00000518825 DDR1Q08345 913 aa9.38□□□□□ -0.91
CTNNA1-210ENST00000518825 COASYQ13057 564 aa9.38□□□□□ -0.91
CTNNA1-210ENST00000518825 TMC4Q7Z404 712 aa9.38□□□□□ -0.91
CTNNA1-210ENST00000518825 EHBP1Q8NDI1 1231 aa9.38□□□□□ -0.91
CTNNA1-210ENST00000518825 FAM71BQ8TC56 605 aa9.38□□□□□ -0.91
CTNNA1-210ENST00000518825 AENQ8WTP8 325 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms