RNA–Protein interactions for RNA: ENST00000518794.6

ARFGAP1-209, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 1 (best)

Gene ARFGAP1, Length 2,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-209ENST00000518794 LRRC1Q9BTT6 524 aa20.12■□□□□ 0.81
ARFGAP1-209ENST00000518794 DMGDHQ9UI17 866 aaKnown RBP20.12■□□□□ 0.81
ARFGAP1-209ENST00000518794 SIK3Q9Y2K2 1263 aa20.12■□□□□ 0.81
ARFGAP1-209ENST00000518794 SLURP2P0DP57 97 aa20.11■□□□□ 0.81
ARFGAP1-209ENST00000518794 CALCRLQ16602 461 aa20.11■□□□□ 0.81
ARFGAP1-209ENST00000518794 UBE2SQ16763 222 aa20.11■□□□□ 0.81
ARFGAP1-209ENST00000518794 CREG2Q8IUH2 290 aa20.11■□□□□ 0.81
ARFGAP1-209ENST00000518794 FAM114A1Q8IWE2 563 aa20.11■□□□□ 0.81
ARFGAP1-209ENST00000518794 SPZ1Q9BXG8 430 aa20.11■□□□□ 0.81
ARFGAP1-209ENST00000518794 CCDC88AQ3V6T2 1871 aa20.11■□□□□ 0.81
ARFGAP1-209ENST00000518794 MYH10P35580 1976 aa20.11■□□□□ 0.81
ARFGAP1-209ENST00000518794 BUB1O43683 1085 aa20.11■□□□□ 0.81
ARFGAP1-209ENST00000518794 GFPT1Q06210 699 aaPredicted RBP20.11■□□□□ 0.81
ARFGAP1-209ENST00000518794 ECM1Q16610 540 aa20.11■□□□□ 0.81
ARFGAP1-209ENST00000518794 LRRC31Q6UY01 552 aa20.11■□□□□ 0.81
ARFGAP1-209ENST00000518794 EHBP1Q8NDI1 1231 aa20.11■□□□□ 0.81
ARFGAP1-209ENST00000518794 PURBQ96QR8 312 aaKnown RBP20.11■□□□□ 0.81
ARFGAP1-209ENST00000518794 TANGO6Q9C0B7 1094 aa20.11■□□□□ 0.81
ARFGAP1-209ENST00000518794 CUEDC2Q9H467 287 aa20.11■□□□□ 0.81
ARFGAP1-209ENST00000518794 GPCPD1Q9NPB8 672 aa20.11■□□□□ 0.81
ARFGAP1-209ENST00000518794 NLRC4Q9NPP4 1024 aa20.11■□□□□ 0.81
ARFGAP1-209ENST00000518794 AKR1B10O60218 316 aa20.11■□□□□ 0.81
ARFGAP1-209ENST00000518794 GNA11P29992 359 aa20.11■□□□□ 0.81
ARFGAP1-209ENST00000518794 CORO7P57737 925 aa20.11■□□□□ 0.81
ARFGAP1-209ENST00000518794 CKAP4Q07065 602 aaKnown RBP20.11■□□□□ 0.81
ARFGAP1-209ENST00000518794 ENOX2Q16206 610 aaKnown RBP20.11■□□□□ 0.81
ARFGAP1-209ENST00000518794 KCTD19Q17RG1 926 aaPredicted RBP20.11■□□□□ 0.81
ARFGAP1-209ENST00000518794 MCTP2Q6DN12 878 aa20.11■□□□□ 0.81
ARFGAP1-209ENST00000518794 CCNI2Q6ZMN8 369 aaPredicted RBP20.11■□□□□ 0.81
ARFGAP1-209ENST00000518794 RETREG2Q8NC44 543 aa20.11■□□□□ 0.81
ARFGAP1-209ENST00000518794 CDK5RAP3Q96JB5 506 aa20.11■□□□□ 0.81
ARFGAP1-209ENST00000518794 DONSONQ9NYP3 566 aa20.11■□□□□ 0.81
ARFGAP1-209ENST00000518794 ROBO3Q96MS0 1386 aa20.11■□□□□ 0.81
ARFGAP1-209ENST00000518794 PRPF6O94906 941 aaKnown RBP20.1■□□□□ 0.81
ARFGAP1-209ENST00000518794 TNNI2P48788 182 aa20.1■□□□□ 0.81
ARFGAP1-209ENST00000518794 GSCP56915 257 aaPredicted RBP20.1■□□□□ 0.81
ARFGAP1-209ENST00000518794 CACNB1Q02641 598 aaPredicted RBP20.1■□□□□ 0.81
ARFGAP1-209ENST00000518794 PICALMQ13492 652 aa20.1■□□□□ 0.81
ARFGAP1-209ENST00000518794 CENPPQ6IPU0 288 aa20.1■□□□□ 0.81
ARFGAP1-209ENST00000518794 FGFBP2Q9BYJ0 223 aa20.1■□□□□ 0.81
ARFGAP1-209ENST00000518794 SUFUQ9UMX1 484 aa20.1■□□□□ 0.81
ARFGAP1-209ENST00000518794 SNX12Q9UMY4 172 aa20.1■□□□□ 0.81
ARFGAP1-209ENST00000518794 AGPSO00116 658 aa20.1■□□□□ 0.81
ARFGAP1-209ENST00000518794 SSBP05455 408 aaKnown RBP eCLIP20.1■□□□□ 0.81
ARFGAP1-209ENST00000518794 LARP4BQ92615 738 aaKnown RBP20.1■□□□□ 0.81
ARFGAP1-209ENST00000518794 SH2D4AQ9H788 454 aa20.1■□□□□ 0.81
ARFGAP1-209ENST00000518794 PLAGL2Q9UPG8 496 aa20.1■□□□□ 0.81
ARFGAP1-209ENST00000518794 RPS6KA4O75676 772 aa20.09■□□□□ 0.81
ARFGAP1-209ENST00000518794 GPSM2P81274 684 aa20.09■□□□□ 0.81
ARFGAP1-209ENST00000518794 AMPD3Q01432 767 aa20.09■□□□□ 0.81
ARFGAP1-209ENST00000518794 SUGP1Q8IWZ8 645 aaKnown RBP20.09■□□□□ 0.81
ARFGAP1-209ENST00000518794 SNX29Q8TEQ0 813 aa20.09■□□□□ 0.81
ARFGAP1-209ENST00000518794 FAM212AQ96EL1 285 aa20.09■□□□□ 0.81
ARFGAP1-209ENST00000518794 MS4A14Q96JA4 679 aa20.09■□□□□ 0.81
ARFGAP1-209ENST00000518794 CRACR2AQ9BSW2 395 aa20.09■□□□□ 0.81
ARFGAP1-209ENST00000518794 MYH1P12882 1939 aa20.09■□□□□ 0.81
ARFGAP1-209ENST00000518794 RASSF7Q02833 373 aa20.09■□□□□ 0.81
ARFGAP1-209ENST00000518794 C16orf86Q6ZW13 317 aa20.09■□□□□ 0.81
ARFGAP1-209ENST00000518794 SND1Q7KZF4 910 aaKnown RBP eCLIP20.09■□□□□ 0.81
ARFGAP1-209ENST00000518794 NEDD1Q8NHV4 660 aa20.09■□□□□ 0.81
ARFGAP1-209ENST00000518794 DDX12PQ92771 950 aa20.09■□□□□ 0.81
ARFGAP1-209ENST00000518794 MTMR9Q96QG7 549 aa20.09■□□□□ 0.81
ARFGAP1-209ENST00000518794 ACBD3Q9H3P7 528 aa20.09■□□□□ 0.81
ARFGAP1-209ENST00000518794 MED4Q9NPJ6 270 aa20.09■□□□□ 0.81
ARFGAP1-209ENST00000518794 CNTNAP4Q9C0A0 1308 aa20.08■□□□□ 0.81
ARFGAP1-209ENST00000518794 COL5A3P25940 1745 aaPredicted RBP20.08■□□□□ 0.81
ARFGAP1-209ENST00000518794 PPP4CP60510 307 aa20.08■□□□□ 0.81
ARFGAP1-209ENST00000518794 GSTO1P78417 241 aa20.08■□□□□ 0.81
ARFGAP1-209ENST00000518794 MSL3Q8N5Y2 521 aaKnown RBP20.08■□□□□ 0.81
ARFGAP1-209ENST00000518794 AFAP1L1Q8TED9 768 aa20.08■□□□□ 0.81
ARFGAP1-209ENST00000518794 UFL1O94874 794 aa20.08■□□□□ 0.8
ARFGAP1-209ENST00000518794 TUBBP07437 444 aa20.08■□□□□ 0.8
ARFGAP1-209ENST00000518794 SLC1A4P43007 532 aa20.08■□□□□ 0.8
ARFGAP1-209ENST00000518794 NAP1L1P55209 391 aaKnown RBP20.08■□□□□ 0.8
ARFGAP1-209ENST00000518794 MAP9Q49MG5 647 aa20.08■□□□□ 0.8
ARFGAP1-209ENST00000518794 MMS22LQ6ZRQ5 1243 aa20.08■□□□□ 0.8
ARFGAP1-209ENST00000518794 EHD4Q9H223 541 aa20.08■□□□□ 0.8
ARFGAP1-209ENST00000518794 MAGEF1Q9HAY2 307 aa20.08■□□□□ 0.8
ARFGAP1-209ENST00000518794 F8W031 263 aaPredicted RBP20.07■□□□□ 0.8
ARFGAP1-209ENST00000518794 TACC1O75410 805 aa20.07■□□□□ 0.8
ARFGAP1-209ENST00000518794 ARID5AQ03989 594 aa20.07■□□□□ 0.8
ARFGAP1-209ENST00000518794 SWT1Q5T5J6 900 aaKnown RBP20.07■□□□□ 0.8
ARFGAP1-209ENST00000518794 ZNF662Q6ZS27 426 aa20.07■□□□□ 0.8
ARFGAP1-209ENST00000518794 ZNF804AQ7Z570 1209 aa20.07■□□□□ 0.8
ARFGAP1-209ENST00000518794 MTMR8Q96EF0 704 aa20.07■□□□□ 0.8
ARFGAP1-209ENST00000518794 LZTS2Q9BRK4 669 aa20.07■□□□□ 0.8
ARFGAP1-209ENST00000518794 RTCBQ9Y3I0 505 aaKnown RBP20.07■□□□□ 0.8
ARFGAP1-209ENST00000518794 A0A1W2PQJ5 194 aa20.07■□□□□ 0.8
ARFGAP1-209ENST00000518794 ANO9A1A5B4 782 aa20.07■□□□□ 0.8
ARFGAP1-209ENST00000518794 AARSP49588 968 aaKnown RBP eCLIP20.07■□□□□ 0.8
ARFGAP1-209ENST00000518794 GRAPQ13588 217 aa20.07■□□□□ 0.8
ARFGAP1-209ENST00000518794 TTC19Q6DKK2 380 aaPredicted RBP20.07■□□□□ 0.8
ARFGAP1-209ENST00000518794 UNC13DQ70J99 1090 aa20.07■□□□□ 0.8
ARFGAP1-209ENST00000518794 NELFCDQ8IXH7 590 aa20.07■□□□□ 0.8
ARFGAP1-209ENST00000518794 GRAPLQ8TC17 118 aaPredicted RBP20.07■□□□□ 0.8
ARFGAP1-209ENST00000518794 OSBPL9Q96SU4 736 aa20.07■□□□□ 0.8
ARFGAP1-209ENST00000518794 EP400Q96L91 3159 aa20.07■□□□□ 0.8
ARFGAP1-209ENST00000518794 TARSL2A2RTX5 802 aaKnown RBP20.06■□□□□ 0.8
ARFGAP1-209ENST00000518794 USO1O60763 962 aaKnown RBP20.06■□□□□ 0.8
ARFGAP1-209ENST00000518794 PDHBP11177 359 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms