RNA–Protein interactions for RNA: ENST00000517545.5

PCM1-203, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 3,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-203ENST00000517545 PPANQ9NQ55 473 aaKnown RBP13.67□□□□□ -0.22
PCM1-203ENST00000517545 CACNA1SQ13698 1873 aa13.66□□□□□ -0.22
PCM1-203ENST00000517545 ITGB3BPQ13352 177 aaPredicted RBP13.66□□□□□ -0.22
PCM1-203ENST00000517545 SF3B2Q13435 895 aaKnown RBP13.66□□□□□ -0.22
PCM1-203ENST00000517545 PDXDC1Q6P996 788 aa13.66□□□□□ -0.22
PCM1-203ENST00000517545 PROCA1Q8NCQ7 364 aaPredicted RBP13.66□□□□□ -0.22
PCM1-203ENST00000517545 GLIS3Q8NEA6 775 aa13.66□□□□□ -0.22
PCM1-203ENST00000517545 OR2W6PQ8NHA6 318 aa13.66□□□□□ -0.22
PCM1-203ENST00000517545 MMTAG2Q9BU76 263 aaKnown RBP13.66□□□□□ -0.22
PCM1-203ENST00000517545 PLAAQ9Y263 795 aa13.66□□□□□ -0.22
PCM1-203ENST00000517545 CCNT1O60563 726 aaKnown RBP13.66□□□□□ -0.22
PCM1-203ENST00000517545 PCP11498 1178 aaKnown RBP13.66□□□□□ -0.22
PCM1-203ENST00000517545 MAN2A1Q16706 1144 aa13.66□□□□□ -0.22
PCM1-203ENST00000517545 CNNM4Q6P4Q7 775 aa13.66□□□□□ -0.22
PCM1-203ENST00000517545 DYMQ7RTS9 669 aa13.66□□□□□ -0.22
PCM1-203ENST00000517545 CACNA2D4Q7Z3S7 1137 aa13.66□□□□□ -0.22
PCM1-203ENST00000517545 KLHL7Q8IXQ5 586 aa13.66□□□□□ -0.22
PCM1-203ENST00000517545 CCDC13Q8IYE1 715 aa13.66□□□□□ -0.22
PCM1-203ENST00000517545 PNMA1Q8ND90 353 aa13.66□□□□□ -0.22
PCM1-203ENST00000517545 IL17RBQ9NRM6 502 aa13.66□□□□□ -0.22
PCM1-203ENST00000517545 NHSL1Q5SYE7 1610 aa13.65□□□□□ -0.22
PCM1-203ENST00000517545 RAD51CO43502 376 aa13.65□□□□□ -0.22
PCM1-203ENST00000517545 OR52Z1P0C646 297 aa13.65□□□□□ -0.22
PCM1-203ENST00000517545 IBSPP21815 317 aaPredicted RBP13.65□□□□□ -0.22
PCM1-203ENST00000517545 KLRC1P26715 233 aa13.65□□□□□ -0.22
PCM1-203ENST00000517545 EVA1CP58658 441 aa13.65□□□□□ -0.22
PCM1-203ENST00000517545 SPRED3Q2MJR0 410 aa13.65□□□□□ -0.22
PCM1-203ENST00000517545 SH3GLB2Q9NR46 395 aa13.65□□□□□ -0.22
PCM1-203ENST00000517545 ANKRD36CQ5JPF3 1778 aa13.65□□□□□ -0.22
PCM1-203ENST00000517545 BACH1O14867 736 aa13.65□□□□□ -0.22
PCM1-203ENST00000517545 TLR2O60603 784 aa13.65□□□□□ -0.22
PCM1-203ENST00000517545 EHHADHQ08426 723 aa13.65□□□□□ -0.22
PCM1-203ENST00000517545 ENOX2Q16206 610 aaKnown RBP13.65□□□□□ -0.22
PCM1-203ENST00000517545 MICALCLQ6ZW33 695 aa13.65□□□□□ -0.22
PCM1-203ENST00000517545 SPATS2Q86XZ4 545 aaKnown RBP13.65□□□□□ -0.22
PCM1-203ENST00000517545 CD302Q8IX05 232 aa13.65□□□□□ -0.22
PCM1-203ENST00000517545 MREGQ8N565 214 aa13.65□□□□□ -0.22
PCM1-203ENST00000517545 ZKSCAN4Q969J2 545 aaPredicted RBP13.65□□□□□ -0.22
PCM1-203ENST00000517545 PAGR1Q9BTK6 254 aa13.65□□□□□ -0.22
PCM1-203ENST00000517545 TANGO6Q9C0B7 1094 aa13.65□□□□□ -0.22
PCM1-203ENST00000517545 CUEDC2Q9H467 287 aa13.65□□□□□ -0.22
PCM1-203ENST00000517545 VCPKMTQ9H867 229 aa13.65□□□□□ -0.22
PCM1-203ENST00000517545 STXBP3O00186 592 aa13.65□□□□□ -0.22
PCM1-203ENST00000517545 ATP6V1AP38606 617 aa13.65□□□□□ -0.22
PCM1-203ENST00000517545 SETQ01105 290 aaPredicted RBP13.65□□□□□ -0.22
PCM1-203ENST00000517545 TFAP4Q01664 338 aa13.65□□□□□ -0.22
PCM1-203ENST00000517545 ACTN3Q08043 901 aaPredicted RBP13.65□□□□□ -0.22
PCM1-203ENST00000517545 KCNMA1Q12791 1236 aa13.65□□□□□ -0.22
PCM1-203ENST00000517545 LRRC41Q15345 812 aa13.65□□□□□ -0.22
PCM1-203ENST00000517545 YTHDF3Q7Z739 585 aaKnown RBP13.65□□□□□ -0.22
PCM1-203ENST00000517545 CCDC84Q86UT8 332 aaPredicted RBP13.65□□□□□ -0.22
PCM1-203ENST00000517545 MAD2L2Q9UI95 211 aa13.65□□□□□ -0.22
PCM1-203ENST00000517545 DLEC1Q9Y238 1755 aa13.65□□□□□ -0.23
PCM1-203ENST00000517545 MYMKA6NI61 221 aa13.64□□□□□ -0.23
PCM1-203ENST00000517545 FAM107AO95990 144 aa13.64□□□□□ -0.23
PCM1-203ENST00000517545 GOLGA8HP0CJ92 632 aa13.64□□□□□ -0.23
PCM1-203ENST00000517545 PRPHP41219 470 aa13.64□□□□□ -0.23
PCM1-203ENST00000517545 DDR1Q08345 913 aa13.64□□□□□ -0.23
PCM1-203ENST00000517545 SEMA3FQ13275 785 aa13.64□□□□□ -0.23
PCM1-203ENST00000517545 PTPROQ16827 1216 aa13.64□□□□□ -0.23
PCM1-203ENST00000517545 EMC10Q5UCC4 262 aa13.64□□□□□ -0.23
PCM1-203ENST00000517545 INPP4AQ96PE3 977 aaPredicted RBP13.64□□□□□ -0.23
PCM1-203ENST00000517545 PACSIN1Q9BY11 444 aa13.64□□□□□ -0.23
PCM1-203ENST00000517545 XIRP1Q702N8 1843 aaKnown RBP13.64□□□□□ -0.23
PCM1-203ENST00000517545 USP17L8P0C7I0 530 aa13.64□□□□□ -0.23
PCM1-203ENST00000517545 IL6STP40189 918 aaPredicted RBP13.64□□□□□ -0.23
PCM1-203ENST00000517545 MECOMQ03112 1051 aa13.64□□□□□ -0.23
PCM1-203ENST00000517545 ARID5AQ03989 594 aa13.64□□□□□ -0.23
PCM1-203ENST00000517545 CCDC40Q4G0X9 1142 aa13.64□□□□□ -0.23
PCM1-203ENST00000517545 RNF10Q8N5U6 811 aaKnown RBP13.64□□□□□ -0.23
PCM1-203ENST00000517545 NSUN4Q96CB9 384 aaKnown RBP13.64□□□□□ -0.23
PCM1-203ENST00000517545 IQCDQ96DY2 449 aa13.64□□□□□ -0.23
PCM1-203ENST00000517545 CYFIP2Q96F07 1278 aa13.64□□□□□ -0.23
PCM1-203ENST00000517545 KANSL2Q9H9L4 492 aa13.64□□□□□ -0.23
PCM1-203ENST00000517545 MAGEF1Q9HAY2 307 aa13.64□□□□□ -0.23
PCM1-203ENST00000517545 KLC4Q9NSK0 619 aa13.64□□□□□ -0.23
PCM1-203ENST00000517545 JAG2Q9Y219 1238 aa13.64□□□□□ -0.23
PCM1-203ENST00000517545 USP17L3A6NCW0 530 aa13.64□□□□□ -0.23
PCM1-203ENST00000517545 USP17L4A6NCW7 530 aa13.64□□□□□ -0.23
PCM1-203ENST00000517545 KLRK1P26718 216 aa13.64□□□□□ -0.23
PCM1-203ENST00000517545 LRRC55Q6ZSA7 311 aa13.64□□□□□ -0.23
PCM1-203ENST00000517545 USP17L1Q7RTZ2 530 aa13.64□□□□□ -0.23
PCM1-203ENST00000517545 DDX42Q86XP3 938 aaKnown RBP eCLIP13.64□□□□□ -0.23
PCM1-203ENST00000517545 DYNLL2Q96FJ2 89 aa13.64□□□□□ -0.23
PCM1-203ENST00000517545 HMGB1P1B2RPK0 211 aaPredicted RBP13.63□□□□□ -0.23
PCM1-203ENST00000517545 ERVK-9P63128 1117 aa13.63□□□□□ -0.23
PCM1-203ENST00000517545 HLTFQ14527 1009 aaKnown RBP eCLIP13.63□□□□□ -0.23
PCM1-203ENST00000517545 CDC37Q16543 378 aaPredicted RBP13.63□□□□□ -0.23
PCM1-203ENST00000517545 TMED8Q6PL24 325 aaPredicted RBP13.63□□□□□ -0.23
PCM1-203ENST00000517545 C6orf89Q6UWU4 347 aa13.63□□□□□ -0.23
PCM1-203ENST00000517545 GOLPH3Q9H4A6 298 aa13.63□□□□□ -0.23
PCM1-203ENST00000517545 BARHL2Q9NY43 387 aa13.63□□□□□ -0.23
PCM1-203ENST00000517545 SSU72P8A0A1W2PR75 194 aa13.63□□□□□ -0.23
PCM1-203ENST00000517545 LAD1O00515 517 aa13.63□□□□□ -0.23
PCM1-203ENST00000517545 RASSF9O75901 435 aa13.63□□□□□ -0.23
PCM1-203ENST00000517545 TMOD1P28289 359 aa13.63□□□□□ -0.23
PCM1-203ENST00000517545 QPCTQ16769 361 aa13.63□□□□□ -0.23
PCM1-203ENST00000517545 FAM84BQ96KN1 310 aaPredicted RBP13.63□□□□□ -0.23
PCM1-203ENST00000517545 AK8Q96MA6 479 aa13.63□□□□□ -0.23
PCM1-203ENST00000517545 TMBIM4Q9HC24 238 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms