RNA–Protein interactions for RNA: ENST00000517488.1

PDGFRB-202, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 822 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-202ENST00000517488 CDC27P30260 824 aa16.26■□□□□ 0.19
PDGFRB-202ENST00000517488 CPT1AP50416 773 aa16.26■□□□□ 0.19
PDGFRB-202ENST00000517488 PSMC6P62333 389 aa16.26■□□□□ 0.19
PDGFRB-202ENST00000517488 ITGA7Q13683 1181 aa16.26■□□□□ 0.19
PDGFRB-202ENST00000517488 VSIG10LQ86VR7 867 aa16.26■□□□□ 0.19
PDGFRB-202ENST00000517488 BADQ92934 168 aa16.26■□□□□ 0.19
PDGFRB-202ENST00000517488 BRF1Q92994 677 aa16.26■□□□□ 0.19
PDGFRB-202ENST00000517488 TMEM39AQ9NV64 488 aa16.26■□□□□ 0.19
PDGFRB-202ENST00000517488 DDX41Q9UJV9 622 aaKnown RBP16.26■□□□□ 0.19
PDGFRB-202ENST00000517488 CNTNAP5Q8WYK1 1306 aa16.25■□□□□ 0.19
PDGFRB-202ENST00000517488 A6NJR5 290 aa16.25■□□□□ 0.19
PDGFRB-202ENST00000517488 PIK3CDO00329 1044 aa16.25■□□□□ 0.19
PDGFRB-202ENST00000517488 MEIS2O14770 477 aa16.25■□□□□ 0.19
PDGFRB-202ENST00000517488 PSMA5P28066 241 aa16.25■□□□□ 0.19
PDGFRB-202ENST00000517488 PURAQ00577 322 aaKnown RBP16.25■□□□□ 0.19
PDGFRB-202ENST00000517488 ARHGAP1Q07960 439 aa16.25■□□□□ 0.19
PDGFRB-202ENST00000517488 HEATR3Q7Z4Q2 680 aa16.25■□□□□ 0.19
PDGFRB-202ENST00000517488 FAM126BQ8IXS8 530 aa16.25■□□□□ 0.19
PDGFRB-202ENST00000517488 AFG1LQ8WV93 481 aa16.25■□□□□ 0.19
PDGFRB-202ENST00000517488 GPKOWQ92917 476 aaPredicted RBP eCLIP16.25■□□□□ 0.19
PDGFRB-202ENST00000517488 TBX21Q9UL17 535 aa16.25■□□□□ 0.19
PDGFRB-202ENST00000517488 V9GY48 417 aaPredicted RBP16.25■□□□□ 0.19
PDGFRB-202ENST00000517488 SZT2Q5T011 3432 aa16.25■□□□□ 0.19
PDGFRB-202ENST00000517488 MROH7Q68CQ1 1323 aa16.24■□□□□ 0.19
PDGFRB-202ENST00000517488 GH1P01241 217 aa16.24■□□□□ 0.19
PDGFRB-202ENST00000517488 CCND2P30279 289 aa16.24■□□□□ 0.19
PDGFRB-202ENST00000517488 ADD1P35611 737 aaKnown RBP16.24■□□□□ 0.19
PDGFRB-202ENST00000517488 RCAN1P53805 252 aa16.24■□□□□ 0.19
PDGFRB-202ENST00000517488 BRDTQ58F21 947 aaPredicted RBP16.24■□□□□ 0.19
PDGFRB-202ENST00000517488 TDHQ8IZJ6 230 aa16.24■□□□□ 0.19
PDGFRB-202ENST00000517488 FBXL16Q8N461 479 aa16.24■□□□□ 0.19
PDGFRB-202ENST00000517488 SMARCC2Q8TAQ2 1214 aa16.24■□□□□ 0.19
PDGFRB-202ENST00000517488 CUL5Q93034 780 aa16.24■□□□□ 0.19
PDGFRB-202ENST00000517488 MTG1Q9BT17 334 aaPredicted RBP16.24■□□□□ 0.19
PDGFRB-202ENST00000517488 AGXT2Q9BYV1 514 aa16.24■□□□□ 0.19
PDGFRB-202ENST00000517488 PSTPIP2Q9H939 334 aa16.24■□□□□ 0.19
PDGFRB-202ENST00000517488 ZSWIM6Q9HCJ5 1215 aa16.24■□□□□ 0.19
PDGFRB-202ENST00000517488 POLR3EQ9NVU0 708 aa16.24■□□□□ 0.19
PDGFRB-202ENST00000517488 MRVI1Q9Y6F6 885 aa16.24■□□□□ 0.19
PDGFRB-202ENST00000517488 FRMPD4Q14CM0 1322 aa16.23■□□□□ 0.19
PDGFRB-202ENST00000517488 SOX1O00570 391 aaPredicted RBP16.23■□□□□ 0.19
PDGFRB-202ENST00000517488 CD4P01730 458 aa16.23■□□□□ 0.19
PDGFRB-202ENST00000517488 RAG1P15918 1043 aa16.23■□□□□ 0.19
PDGFRB-202ENST00000517488 METAP2P50579 478 aaKnown RBP eCLIP16.23■□□□□ 0.19
PDGFRB-202ENST00000517488 MRPS9P82933 396 aaKnown RBP16.23■□□□□ 0.19
PDGFRB-202ENST00000517488 UBE2SQ16763 222 aa16.23■□□□□ 0.19
PDGFRB-202ENST00000517488 WWC2Q6AWC2 1192 aa16.23■□□□□ 0.19
PDGFRB-202ENST00000517488 TYW1BQ6NUM6 668 aa16.23■□□□□ 0.19
PDGFRB-202ENST00000517488 PPP1R13LQ8WUF5 828 aa16.23■□□□□ 0.19
PDGFRB-202ENST00000517488 TRPV6Q9H1D0 765 aa16.23■□□□□ 0.19
PDGFRB-202ENST00000517488 MYH6P13533 1939 aa16.22■□□□□ 0.19
PDGFRB-202ENST00000517488 KPNA6O60684 536 aa16.22■□□□□ 0.19
PDGFRB-202ENST00000517488 SP2Q02086 613 aa16.22■□□□□ 0.19
PDGFRB-202ENST00000517488 RUFY3Q7L099 469 aa16.22■□□□□ 0.19
PDGFRB-202ENST00000517488 RTEL1Q9NZ71 1219 aa16.22■□□□□ 0.19
PDGFRB-202ENST00000517488 TLR3O15455 904 aaKnown RBP16.21■□□□□ 0.19
PDGFRB-202ENST00000517488 SORBS3O60504 671 aa16.21■□□□□ 0.19
PDGFRB-202ENST00000517488 B4GALT4O60513 344 aa16.21■□□□□ 0.19
PDGFRB-202ENST00000517488 TIMP1P01033 207 aa16.21■□□□□ 0.19
PDGFRB-202ENST00000517488 MMP3P08254 477 aa16.21■□□□□ 0.19
PDGFRB-202ENST00000517488 EPHB4P54760 987 aa16.21■□□□□ 0.19
PDGFRB-202ENST00000517488 LAMC2Q13753 1193 aa16.21■□□□□ 0.19
PDGFRB-202ENST00000517488 TOB2Q14106 344 aaPredicted RBP16.21■□□□□ 0.19
PDGFRB-202ENST00000517488 NBPF20Q3BBV1 942 aa16.21■□□□□ 0.19
PDGFRB-202ENST00000517488 EMID1Q96A84 441 aaPredicted RBP16.21■□□□□ 0.19
PDGFRB-202ENST00000517488 LRCH3Q96II8 777 aa16.21■□□□□ 0.19
PDGFRB-202ENST00000517488 INPP4AQ96PE3 977 aaPredicted RBP16.21■□□□□ 0.19
PDGFRB-202ENST00000517488 UPF3BQ9BZI7 483 aaKnown RBP16.21■□□□□ 0.19
PDGFRB-202ENST00000517488 TM6SF1Q9BZW5 370 aa16.21■□□□□ 0.19
PDGFRB-202ENST00000517488 ALDH8A1Q9H2A2 487 aaPredicted RBP16.21■□□□□ 0.19
PDGFRB-202ENST00000517488 CYP46A1Q9Y6A2 500 aa16.21■□□□□ 0.19
PDGFRB-202ENST00000517488 CCDC196A0A1B0GTZ2 297 aa16.2■□□□□ 0.18
PDGFRB-202ENST00000517488 STXBP3O00186 592 aa16.2■□□□□ 0.18
PDGFRB-202ENST00000517488 GGPS1O95749 300 aa16.2■□□□□ 0.18
PDGFRB-202ENST00000517488 TGFB3P10600 412 aa16.2■□□□□ 0.18
PDGFRB-202ENST00000517488 UBA1P22314 1058 aaKnown RBP16.2■□□□□ 0.18
PDGFRB-202ENST00000517488 PDIA3P30101 505 aaKnown RBP16.2■□□□□ 0.18
PDGFRB-202ENST00000517488 NAPAP54920 295 aa16.2■□□□□ 0.18
PDGFRB-202ENST00000517488 EVCP57679 992 aa16.2■□□□□ 0.18
PDGFRB-202ENST00000517488 SEMA3FQ13275 785 aa16.2■□□□□ 0.18
PDGFRB-202ENST00000517488 SHHQ15465 462 aa16.2■□□□□ 0.18
PDGFRB-202ENST00000517488 LRIT3Q3SXY7 679 aa16.2■□□□□ 0.18
PDGFRB-202ENST00000517488 C9orf50Q5SZB4 431 aa16.2■□□□□ 0.18
PDGFRB-202ENST00000517488 CELF3Q5SZQ8 465 aaKnown RBP16.2■□□□□ 0.18
PDGFRB-202ENST00000517488 MYSM1Q5VVJ2 828 aa16.2■□□□□ 0.18
PDGFRB-202ENST00000517488 PCNX4Q63HM2 1172 aa16.2■□□□□ 0.18
PDGFRB-202ENST00000517488 KCNV1Q6PIU1 500 aa16.2■□□□□ 0.18
PDGFRB-202ENST00000517488 DHX37Q8IY37 1157 aaKnown RBP16.2■□□□□ 0.18
PDGFRB-202ENST00000517488 KAT2BQ92831 832 aa16.2■□□□□ 0.18
PDGFRB-202ENST00000517488 LARP6Q9BRS8 491 aaKnown RBP16.2■□□□□ 0.18
PDGFRB-202ENST00000517488 SEZ6LQ9BYH1 1024 aa16.2■□□□□ 0.18
PDGFRB-202ENST00000517488 PPP1R12CQ9BZL4 782 aa16.2■□□□□ 0.18
PDGFRB-202ENST00000517488 BCAS3Q9H6U6 928 aa16.2■□□□□ 0.18
PDGFRB-202ENST00000517488 TRMT13Q9NUP7 481 aaKnown RBP16.2■□□□□ 0.18
PDGFRB-202ENST00000517488 NID2Q14112 1375 aa16.2■□□□□ 0.18
PDGFRB-202ENST00000517488 SPATA31C2B4DYI2 1134 aa16.19■□□□□ 0.18
PDGFRB-202ENST00000517488 PPFIA3O75145 1194 aa16.19■□□□□ 0.18
PDGFRB-202ENST00000517488 ICAM3P32942 547 aa16.19■□□□□ 0.18
PDGFRB-202ENST00000517488 DGKDQ16760 1214 aa16.19■□□□□ 0.18
PDGFRB-202ENST00000517488 PPTC7Q8NI37 304 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms