RNA–Protein interactions for RNA: ENST00000516133.1

SCARNA16.1-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 183 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.1-201ENST00000516133 MEIS2O14770 477 aa12.9□□□□□ -0.34
SCARNA16.1-201ENST00000516133 KIAA0355O15063 1070 aa12.9□□□□□ -0.34
SCARNA16.1-201ENST00000516133 STAM2O75886 525 aa12.9□□□□□ -0.34
SCARNA16.1-201ENST00000516133 GH1P01241 217 aa12.9□□□□□ -0.34
SCARNA16.1-201ENST00000516133 PTGS1P23219 599 aa12.9□□□□□ -0.34
SCARNA16.1-201ENST00000516133 METAP2P50579 478 aaKnown RBP eCLIP12.9□□□□□ -0.34
SCARNA16.1-201ENST00000516133 EVCP57679 992 aa12.9□□□□□ -0.34
SCARNA16.1-201ENST00000516133 APOBRQ0VD83 1088 aa12.9□□□□□ -0.34
SCARNA16.1-201ENST00000516133 FUT2Q10981 343 aa12.9□□□□□ -0.34
SCARNA16.1-201ENST00000516133 PGM5Q15124 567 aa12.9□□□□□ -0.34
SCARNA16.1-201ENST00000516133 XRRA1Q6P2D8 792 aa12.9□□□□□ -0.34
SCARNA16.1-201ENST00000516133 USP17L6PQ6QN14 398 aa12.9□□□□□ -0.34
SCARNA16.1-201ENST00000516133 HEATR3Q7Z4Q2 680 aa12.9□□□□□ -0.34
SCARNA16.1-201ENST00000516133 PDLIM7Q9NR12 457 aa12.9□□□□□ -0.34
SCARNA16.1-201ENST00000516133 FAM217BQ9NTX9 383 aaPredicted RBP12.9□□□□□ -0.34
SCARNA16.1-201ENST00000516133 TMEM39AQ9NV64 488 aa12.9□□□□□ -0.34
SCARNA16.1-201ENST00000516133 DDX41Q9UJV9 622 aaKnown RBP12.9□□□□□ -0.34
SCARNA16.1-201ENST00000516133 MRVI1Q9Y6F6 885 aa12.9□□□□□ -0.34
SCARNA16.1-201ENST00000516133 hCG_1984214I3L0E3 225 aa12.89□□□□□ -0.35
SCARNA16.1-201ENST00000516133 TLR3O15455 904 aaKnown RBP12.89□□□□□ -0.35
SCARNA16.1-201ENST00000516133 ARIH2O95376 493 aa12.89□□□□□ -0.35
SCARNA16.1-201ENST00000516133 ADD1P35611 737 aaKnown RBP12.89□□□□□ -0.35
SCARNA16.1-201ENST00000516133 PURAQ00577 322 aaKnown RBP12.89□□□□□ -0.35
SCARNA16.1-201ENST00000516133 MDM2Q00987 491 aaPredicted RBP12.89□□□□□ -0.35
SCARNA16.1-201ENST00000516133 FAAP100Q0VG06 881 aa12.89□□□□□ -0.35
SCARNA16.1-201ENST00000516133 ITGA7Q13683 1181 aa12.89□□□□□ -0.35
SCARNA16.1-201ENST00000516133 LAMC2Q13753 1193 aa12.89□□□□□ -0.35
SCARNA16.1-201ENST00000516133 LY6KQ17RY6 165 aa12.89□□□□□ -0.35
SCARNA16.1-201ENST00000516133 ZNF713Q8N859 430 aaPredicted RBP12.89□□□□□ -0.35
SCARNA16.1-201ENST00000516133 SLC43A3Q8NBI5 491 aa12.89□□□□□ -0.35
SCARNA16.1-201ENST00000516133 EMID1Q96A84 441 aaPredicted RBP12.89□□□□□ -0.35
SCARNA16.1-201ENST00000516133 UBE2OQ9C0C9 1292 aaKnown RBP12.89□□□□□ -0.35
SCARNA16.1-201ENST00000516133 TRIM43BA6NCK2 446 aa12.88□□□□□ -0.35
SCARNA16.1-201ENST00000516133 MYL3P08590 195 aa12.88□□□□□ -0.35
SCARNA16.1-201ENST00000516133 RAG1P15918 1043 aa12.88□□□□□ -0.35
SCARNA16.1-201ENST00000516133 CDC27P30260 824 aa12.88□□□□□ -0.35
SCARNA16.1-201ENST00000516133 ANAPC15P60006 121 aa12.88□□□□□ -0.35
SCARNA16.1-201ENST00000516133 GNPTABQ3T906 1256 aa12.88□□□□□ -0.35
SCARNA16.1-201ENST00000516133 PPP1R18Q6NYC8 613 aa12.88□□□□□ -0.35
SCARNA16.1-201ENST00000516133 SH3RF1Q7Z6J0 888 aa12.88□□□□□ -0.35
SCARNA16.1-201ENST00000516133 DHX37Q8IY37 1157 aaKnown RBP12.88□□□□□ -0.35
SCARNA16.1-201ENST00000516133 COPS5Q92905 334 aa12.88□□□□□ -0.35
SCARNA16.1-201ENST00000516133 TRIM43Q96BQ3 446 aaPredicted RBP12.88□□□□□ -0.35
SCARNA16.1-201ENST00000516133 MTG1Q9BT17 334 aaPredicted RBP12.88□□□□□ -0.35
SCARNA16.1-201ENST00000516133 GLT8D2Q9H1C3 349 aa12.88□□□□□ -0.35
SCARNA16.1-201ENST00000516133 FRMPD4Q14CM0 1322 aa12.88□□□□□ -0.35
SCARNA16.1-201ENST00000516133 CNTNAP5Q8WYK1 1306 aa12.88□□□□□ -0.35
SCARNA16.1-201ENST00000516133 SPDYE3A6NKU9 549 aa12.87□□□□□ -0.35
SCARNA16.1-201ENST00000516133 RGS20O76081 388 aa12.87□□□□□ -0.35
SCARNA16.1-201ENST00000516133 PDIA3P30101 505 aaKnown RBP12.87□□□□□ -0.35
SCARNA16.1-201ENST00000516133 NAPAP54920 295 aa12.87□□□□□ -0.35
SCARNA16.1-201ENST00000516133 AKAP17AQ02040 695 aaKnown RBP12.87□□□□□ -0.35
SCARNA16.1-201ENST00000516133 ARHGAP1Q07960 439 aa12.87□□□□□ -0.35
SCARNA16.1-201ENST00000516133 DGKDQ16760 1214 aa12.87□□□□□ -0.35
SCARNA16.1-201ENST00000516133 PCNX4Q63HM2 1172 aa12.87□□□□□ -0.35
SCARNA16.1-201ENST00000516133 WWC2Q6AWC2 1192 aa12.87□□□□□ -0.35
SCARNA16.1-201ENST00000516133 FAM126BQ8IXS8 530 aa12.87□□□□□ -0.35
SCARNA16.1-201ENST00000516133 TDHQ8IZJ6 230 aa12.87□□□□□ -0.35
SCARNA16.1-201ENST00000516133 IL31RAQ8NI17 732 aa12.87□□□□□ -0.35
SCARNA16.1-201ENST00000516133 AFG1LQ8WV93 481 aa12.87□□□□□ -0.35
SCARNA16.1-201ENST00000516133 ZNF274Q96GC6 653 aaPredicted RBP12.87□□□□□ -0.35
SCARNA16.1-201ENST00000516133 INPP4AQ96PE3 977 aaPredicted RBP12.87□□□□□ -0.35
SCARNA16.1-201ENST00000516133 UPF3BQ9BZI7 483 aaKnown RBP12.87□□□□□ -0.35
SCARNA16.1-201ENST00000516133 EHMT1Q9H9B1 1298 aa12.87□□□□□ -0.35
SCARNA16.1-201ENST00000516133 BARHL2Q9NY43 387 aa12.87□□□□□ -0.35
SCARNA16.1-201ENST00000516133 LRRC37A2A6NM11 1700 aa12.87□□□□□ -0.35
SCARNA16.1-201ENST00000516133 GRIN2DO15399 1336 aa12.87□□□□□ -0.35
SCARNA16.1-201ENST00000516133 NID2Q14112 1375 aa12.86□□□□□ -0.35
SCARNA16.1-201ENST00000516133 SPATA31C2B4DYI2 1134 aa12.86□□□□□ -0.35
SCARNA16.1-201ENST00000516133 PRPF3O43395 683 aaKnown RBP12.86□□□□□ -0.35
SCARNA16.1-201ENST00000516133 PPFIA4O75335 1185 aa12.86□□□□□ -0.35
SCARNA16.1-201ENST00000516133 TIMP1P01033 207 aa12.86□□□□□ -0.35
SCARNA16.1-201ENST00000516133 FOSP01100 380 aaPredicted RBP12.86□□□□□ -0.35
SCARNA16.1-201ENST00000516133 CD4P01730 458 aa12.86□□□□□ -0.35
SCARNA16.1-201ENST00000516133 SUPT20HL2P0C7V6 817 aa12.86□□□□□ -0.35
SCARNA16.1-201ENST00000516133 ICAM3P32942 547 aa12.86□□□□□ -0.35
SCARNA16.1-201ENST00000516133 MRPS9P82933 396 aaKnown RBP12.86□□□□□ -0.35
SCARNA16.1-201ENST00000516133 NEDD9Q14511 834 aa12.86□□□□□ -0.35
SCARNA16.1-201ENST00000516133 PFKFB3Q16875 520 aaPredicted RBP12.86□□□□□ -0.35
SCARNA16.1-201ENST00000516133 CELF3Q5SZQ8 465 aaKnown RBP12.86□□□□□ -0.35
SCARNA16.1-201ENST00000516133 MYSM1Q5VVJ2 828 aa12.86□□□□□ -0.35
SCARNA16.1-201ENST00000516133 PPTC7Q8NI37 304 aa12.86□□□□□ -0.35
SCARNA16.1-201ENST00000516133 GPKOWQ92917 476 aaPredicted RBP eCLIP12.86□□□□□ -0.35
SCARNA16.1-201ENST00000516133 BADQ92934 168 aa12.86□□□□□ -0.35
SCARNA16.1-201ENST00000516133 RIC8AQ9NPQ8 531 aa12.86□□□□□ -0.35
SCARNA16.1-201ENST00000516133 PDRG1Q9NUG6 133 aa12.86□□□□□ -0.35
SCARNA16.1-201ENST00000516133 TBX21Q9UL17 535 aa12.86□□□□□ -0.35
SCARNA16.1-201ENST00000516133 LAMA3Q16787 3333 aa12.86□□□□□ -0.35
SCARNA16.1-201ENST00000516133 SMCO2A6NFE2 343 aa12.85□□□□□ -0.35
SCARNA16.1-201ENST00000516133 STXBP3O00186 592 aa12.85□□□□□ -0.35
SCARNA16.1-201ENST00000516133 FIBPO43427 364 aa12.85□□□□□ -0.35
SCARNA16.1-201ENST00000516133 MMP3P08254 477 aa12.85□□□□□ -0.35
SCARNA16.1-201ENST00000516133 SCG2P13521 617 aa12.85□□□□□ -0.35
SCARNA16.1-201ENST00000516133 IFNAR1P17181 557 aa12.85□□□□□ -0.35
SCARNA16.1-201ENST00000516133 FXR1P51114 621 aaKnown RBP eCLIP12.85□□□□□ -0.35
SCARNA16.1-201ENST00000516133 ADCY7P51828 1080 aa12.85□□□□□ -0.35
SCARNA16.1-201ENST00000516133 PSMC6P62333 389 aa12.85□□□□□ -0.35
SCARNA16.1-201ENST00000516133 PTPN11Q06124 597 aaPredicted RBP12.85□□□□□ -0.35
SCARNA16.1-201ENST00000516133 TOB2Q14106 344 aaPredicted RBP12.85□□□□□ -0.35
SCARNA16.1-201ENST00000516133 NFRKBQ6P4R8 1299 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms