RNA–Protein interactions for RNA: ENST00000515918.1

RNU6-488P-201, Transcript of RNA, U6 small nuclear 488, pseudogene, humanhuman

BASIC

Gene RNU6-488P, Length 99 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-488P-201ENST00000515918 MMP19Q99542 508 aa5.54□□□□□ -1.52
RNU6-488P-201ENST00000515918 YIPF2Q9BWQ6 316 aa5.54□□□□□ -1.52
RNU6-488P-201ENST00000515918 CEP41Q9BYV8 373 aa5.54□□□□□ -1.52
RNU6-488P-201ENST00000515918 ASCC2Q9H1I8 757 aaPredicted RBP5.54□□□□□ -1.52
RNU6-488P-201ENST00000515918 DUSP15Q9H1R2 295 aaPredicted RBP5.54□□□□□ -1.52
RNU6-488P-201ENST00000515918 PRDM16Q9HAZ2 1276 aa5.54□□□□□ -1.52
RNU6-488P-201ENST00000515918 PRDM5Q9NQX1 630 aaPredicted RBP5.54□□□□□ -1.52
RNU6-488P-201ENST00000515918 PCDHA2Q9Y5H9 948 aa5.54□□□□□ -1.52
RNU6-488P-201ENST00000515918 CAPN6Q9Y6Q1 641 aa5.54□□□□□ -1.52
RNU6-488P-201ENST00000515918 FAM95CA0A1B0GW59 222 aa5.53□□□□□ -1.52
RNU6-488P-201ENST00000515918 GNB5O14775 395 aa5.53□□□□□ -1.52
RNU6-488P-201ENST00000515918 ZNF205O95201 554 aa5.53□□□□□ -1.52
RNU6-488P-201ENST00000515918 LTFP02788 710 aa5.53□□□□□ -1.52
RNU6-488P-201ENST00000515918 GSTM1P09488 218 aa5.53□□□□□ -1.52
RNU6-488P-201ENST00000515918 CT47B1P0C2W7 299 aaPredicted RBP5.53□□□□□ -1.52
RNU6-488P-201ENST00000515918 FAM87AP0C7U9 286 aa5.53□□□□□ -1.52
RNU6-488P-201ENST00000515918 ZNF865P0CJ78 1059 aaPredicted RBP5.53□□□□□ -1.52
RNU6-488P-201ENST00000515918 ZBTB48P10074 688 aaPredicted RBP5.53□□□□□ -1.52
RNU6-488P-201ENST00000515918 BMP3P12645 472 aa5.53□□□□□ -1.52
RNU6-488P-201ENST00000515918 NOS3P29474 1203 aa5.53□□□□□ -1.52
RNU6-488P-201ENST00000515918 KIR3DL1P43629 444 aa5.53□□□□□ -1.52
RNU6-488P-201ENST00000515918 KRT85P78386 507 aa5.53□□□□□ -1.52
RNU6-488P-201ENST00000515918 HTRA3P83110 453 aa5.53□□□□□ -1.52
RNU6-488P-201ENST00000515918 LACTBP83111 547 aaPredicted RBP5.53□□□□□ -1.52
RNU6-488P-201ENST00000515918 GALEQ14376 348 aa5.53□□□□□ -1.52
RNU6-488P-201ENST00000515918 LRRC32Q14392 662 aa5.53□□□□□ -1.52
RNU6-488P-201ENST00000515918 GRM3Q14832 879 aa5.53□□□□□ -1.52
RNU6-488P-201ENST00000515918 BRD3Q15059 726 aa5.53□□□□□ -1.52
RNU6-488P-201ENST00000515918 DDB1Q16531 1140 aa5.53□□□□□ -1.52
RNU6-488P-201ENST00000515918 MINDY4Q4G0A6 757 aa5.53□□□□□ -1.52
RNU6-488P-201ENST00000515918 IQCEQ6IPM2 695 aa5.53□□□□□ -1.52
RNU6-488P-201ENST00000515918 CYB5RLQ6IPT4 315 aa5.53□□□□□ -1.52
RNU6-488P-201ENST00000515918 PGM2L1Q6PCE3 622 aa5.53□□□□□ -1.52
RNU6-488P-201ENST00000515918 C22orf34Q6ZV56 151 aa5.53□□□□□ -1.52
RNU6-488P-201ENST00000515918 USHBP1Q8N6Y0 703 aa5.53□□□□□ -1.52
RNU6-488P-201ENST00000515918 C2orf69Q8N8R5 385 aa5.53□□□□□ -1.52
RNU6-488P-201ENST00000515918 NEDD1Q8NHV4 660 aa5.53□□□□□ -1.52
RNU6-488P-201ENST00000515918 FBXO41Q8TF61 875 aa5.53□□□□□ -1.52
RNU6-488P-201ENST00000515918 SARGQ9BW04 601 aa5.53□□□□□ -1.52
RNU6-488P-201ENST00000515918 GPR62Q9BZJ7 368 aa5.53□□□□□ -1.52
RNU6-488P-201ENST00000515918 MS4A5Q9H3V2 200 aa5.53□□□□□ -1.52
RNU6-488P-201ENST00000515918 TOPORSQ9NS56 1045 aaPredicted RBP5.53□□□□□ -1.52
RNU6-488P-201ENST00000515918 GPATCH2Q9NW75 528 aa5.53□□□□□ -1.52
RNU6-488P-201ENST00000515918 DDX20Q9UHI6 824 aaKnown RBP5.53□□□□□ -1.52
RNU6-488P-201ENST00000515918 GIT1Q9Y2X7 761 aa5.53□□□□□ -1.52
RNU6-488P-201ENST00000515918 NPHP3-ACAD11A0A0J9YXS1 232 aa5.52□□□□□ -1.53
RNU6-488P-201ENST00000515918 WASH4PA8MWX3 477 aa5.52□□□□□ -1.53
RNU6-488P-201ENST00000515918 IFRD1O00458 451 aaPredicted RBP5.52□□□□□ -1.53
RNU6-488P-201ENST00000515918 DVL2O14641 736 aa5.52□□□□□ -1.53
RNU6-488P-201ENST00000515918 H2AFYO75367 372 aaKnown RBP5.52□□□□□ -1.53
RNU6-488P-201ENST00000515918 U2AF1L5P0DN76 240 aaPredicted RBP5.52□□□□□ -1.53
RNU6-488P-201ENST00000515918 PAMP19021 973 aa5.52□□□□□ -1.53
RNU6-488P-201ENST00000515918 GRK2P25098 689 aa5.52□□□□□ -1.53
RNU6-488P-201ENST00000515918 CYP2C19P33261 490 aa5.52□□□□□ -1.53
RNU6-488P-201ENST00000515918 GRK3P35626 688 aa5.52□□□□□ -1.53
RNU6-488P-201ENST00000515918 GMPRP36959 345 aa5.52□□□□□ -1.53
RNU6-488P-201ENST00000515918 IREB2P48200 963 aaKnown RBP5.52□□□□□ -1.53
RNU6-488P-201ENST00000515918 U2AF1Q01081 240 aaKnown RBP eCLIP5.52□□□□□ -1.53
RNU6-488P-201ENST00000515918 GTF2H3Q13889 308 aa5.52□□□□□ -1.53
RNU6-488P-201ENST00000515918 GBX1Q14549 363 aa5.52□□□□□ -1.53
RNU6-488P-201ENST00000515918 DHX8Q14562 1220 aaKnown RBP5.52□□□□□ -1.53
RNU6-488P-201ENST00000515918 TERF2Q15554 542 aa5.52□□□□□ -1.53
RNU6-488P-201ENST00000515918 ARHGAP44Q17R89 818 aa5.52□□□□□ -1.53
RNU6-488P-201ENST00000515918 CLEC16AQ2KHT3 1053 aa5.52□□□□□ -1.53
RNU6-488P-201ENST00000515918 C4orf46Q504U0 113 aa5.52□□□□□ -1.53
RNU6-488P-201ENST00000515918 FAM47CQ5HY64 1035 aa5.52□□□□□ -1.53
RNU6-488P-201ENST00000515918 IL31Q6EBC2 164 aa5.52□□□□□ -1.53
RNU6-488P-201ENST00000515918 FSTL4Q6MZW2 842 aa5.52□□□□□ -1.53
RNU6-488P-201ENST00000515918 CPNE8Q86YQ8 564 aa5.52□□□□□ -1.53
RNU6-488P-201ENST00000515918 KSR1Q8IVT5 923 aa5.52□□□□□ -1.53
RNU6-488P-201ENST00000515918 EFHBQ8N7U6 833 aa5.52□□□□□ -1.53
RNU6-488P-201ENST00000515918 PJA1Q8NG27 643 aa5.52□□□□□ -1.53
RNU6-488P-201ENST00000515918 PIWIL2Q8TC59 973 aaKnown RBP5.52□□□□□ -1.53
RNU6-488P-201ENST00000515918 WFDC12Q8WWY7 111 aa5.52□□□□□ -1.53
RNU6-488P-201ENST00000515918 GATA6Q92908 595 aa5.52□□□□□ -1.53
RNU6-488P-201ENST00000515918 CLIP3Q96DZ5 547 aa5.52□□□□□ -1.53
RNU6-488P-201ENST00000515918 MYRFLQ96LU7 910 aa5.52□□□□□ -1.53
RNU6-488P-201ENST00000515918 SMURF1Q9HCE7 757 aa5.52□□□□□ -1.53
RNU6-488P-201ENST00000515918 PRDM11Q9NQV5 511 aa5.52□□□□□ -1.53
RNU6-488P-201ENST00000515918 TRIM75PA6NK02 468 aa5.51□□□□□ -1.53
RNU6-488P-201ENST00000515918 FAM47E-STBD1D6RA91 191 aa5.51□□□□□ -1.53
RNU6-488P-201ENST00000515918 ZNF561-AS1K7EIQ3 104 aa5.51□□□□□ -1.53
RNU6-488P-201ENST00000515918 FGF10O15520 208 aaPredicted RBP5.51□□□□□ -1.53
RNU6-488P-201ENST00000515918 ARHGEF15O94989 841 aa5.51□□□□□ -1.53
RNU6-488P-201ENST00000515918 ZRANB2O95218 330 aaKnown RBP eCLIP5.51□□□□□ -1.53
RNU6-488P-201ENST00000515918 CFBP00751 764 aa5.51□□□□□ -1.53
RNU6-488P-201ENST00000515918 AMY2AP04746 511 aa5.51□□□□□ -1.53
RNU6-488P-201ENST00000515918 ASGR2P07307 311 aa5.51□□□□□ -1.53
RNU6-488P-201ENST00000515918 PDE6AP16499 860 aa5.51□□□□□ -1.53
RNU6-488P-201ENST00000515918 AMY2BP19961 511 aa5.51□□□□□ -1.53
RNU6-488P-201ENST00000515918 RXRBP28702 533 aa5.51□□□□□ -1.53
RNU6-488P-201ENST00000515918 TPP2P29144 1249 aaPredicted RBP5.51□□□□□ -1.53
RNU6-488P-201ENST00000515918 GPR3P46089 330 aa5.51□□□□□ -1.53
RNU6-488P-201ENST00000515918 NEK3P51956 506 aa5.51□□□□□ -1.53
RNU6-488P-201ENST00000515918 SCAND1P57086 179 aa5.51□□□□□ -1.53
RNU6-488P-201ENST00000515918 ST5P78524 1137 aa5.51□□□□□ -1.53
RNU6-488P-201ENST00000515918 SAFB2Q14151 953 aaKnown RBP eCLIP5.51□□□□□ -1.53
RNU6-488P-201ENST00000515918 NFKBIBQ15653 356 aa5.51□□□□□ -1.53
RNU6-488P-201ENST00000515918 C10orf62Q5T681 223 aaPredicted RBP5.51□□□□□ -1.53
RNU6-488P-201ENST00000515918 PNMA8AQ86V59 439 aaPredicted RBP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms