RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-231ENST00000515620 MBTPS1Q14703 1052 aa12.41□□□□□ -0.42
CLDND1-231ENST00000515620 CLUL1Q15846 466 aa12.41□□□□□ -0.42
CLDND1-231ENST00000515620 TTBK2Q6IQ55 1244 aa12.41□□□□□ -0.42
CLDND1-231ENST00000515620 RNF207Q6ZRF8 634 aa12.41□□□□□ -0.42
CLDND1-231ENST00000515620 RPAINQ86UA6 219 aa12.41□□□□□ -0.42
CLDND1-231ENST00000515620 SIRT2Q8IXJ6 389 aa12.41□□□□□ -0.42
CLDND1-231ENST00000515620 SP7Q8TDD2 431 aaPredicted RBP12.41□□□□□ -0.42
CLDND1-231ENST00000515620 KAT2BQ92831 832 aa12.41□□□□□ -0.42
CLDND1-231ENST00000515620 MPHOSPH6Q99547 160 aaKnown RBP12.41□□□□□ -0.42
CLDND1-231ENST00000515620 NSUN3Q9H649 340 aaKnown RBP12.41□□□□□ -0.42
CLDND1-231ENST00000515620 H3BNC9 293 aa12.4□□□□□ -0.42
CLDND1-231ENST00000515620 RNF113AO15541 343 aaKnown RBP12.4□□□□□ -0.42
CLDND1-231ENST00000515620 SLC3A2P08195 630 aaKnown RBP12.4□□□□□ -0.42
CLDND1-231ENST00000515620 RPS6P62753 249 aaKnown RBP12.4□□□□□ -0.42
CLDND1-231ENST00000515620 PPARAQ07869 468 aa12.4□□□□□ -0.42
CLDND1-231ENST00000515620 GPM6BQ13491 265 aa12.4□□□□□ -0.42
CLDND1-231ENST00000515620 COL19A1Q14993 1142 aa12.4□□□□□ -0.42
CLDND1-231ENST00000515620 HERC4Q5GLZ8 1057 aaPredicted RBP12.4□□□□□ -0.42
CLDND1-231ENST00000515620 PPP4R3BQ5MIZ7 849 aa12.4□□□□□ -0.42
CLDND1-231ENST00000515620 ZNF618Q5T7W0 954 aa12.4□□□□□ -0.42
CLDND1-231ENST00000515620 SYDE2Q5VT97 1194 aa12.4□□□□□ -0.42
CLDND1-231ENST00000515620 TRAF7Q6Q0C0 670 aa12.4□□□□□ -0.42
CLDND1-231ENST00000515620 CHST3Q7LGC8 479 aa12.4□□□□□ -0.42
CLDND1-231ENST00000515620 IFNL3Q8IZI9 196 aa12.4□□□□□ -0.42
CLDND1-231ENST00000515620 C7orf31Q8N865 590 aa12.4□□□□□ -0.42
CLDND1-231ENST00000515620 KBTBD3Q8NAB2 608 aa12.4□□□□□ -0.42
CLDND1-231ENST00000515620 CLEC4DQ8WXI8 215 aa12.4□□□□□ -0.42
CLDND1-231ENST00000515620 WNT8BQ93098 351 aa12.4□□□□□ -0.42
CLDND1-231ENST00000515620 SAMD11Q96NU1 681 aa12.4□□□□□ -0.42
CLDND1-231ENST00000515620 POP1Q99575 1024 aaKnown RBP12.4□□□□□ -0.42
CLDND1-231ENST00000515620 ALG1Q9BT22 464 aa12.4□□□□□ -0.42
CLDND1-231ENST00000515620 HDAC6Q9UBN7 1215 aa12.4□□□□□ -0.42
CLDND1-231ENST00000515620 GTF2IRD1Q9UHL9 959 aa12.4□□□□□ -0.42
CLDND1-231ENST00000515620 TSPY2A6NKD2 308 aa12.39□□□□□ -0.43
CLDND1-231ENST00000515620 LGR5O75473 907 aa12.39□□□□□ -0.43
CLDND1-231ENST00000515620 GH1P01241 217 aa12.39□□□□□ -0.43
CLDND1-231ENST00000515620 HTRA4P83105 476 aaPredicted RBP12.39□□□□□ -0.43
CLDND1-231ENST00000515620 ARHGAP1Q07960 439 aa12.39□□□□□ -0.43
CLDND1-231ENST00000515620 PTK7Q13308 1070 aa12.39□□□□□ -0.43
CLDND1-231ENST00000515620 SMAD2Q15796 467 aaKnown RBP12.39□□□□□ -0.43
CLDND1-231ENST00000515620 LY6KQ17RY6 165 aa12.39□□□□□ -0.43
CLDND1-231ENST00000515620 TRIM71Q2Q1W2 868 aaKnown RBP12.39□□□□□ -0.43
CLDND1-231ENST00000515620 IER5LQ5T953 404 aa12.39□□□□□ -0.43
CLDND1-231ENST00000515620 FBXO11Q86XK2 927 aa12.39□□□□□ -0.43
CLDND1-231ENST00000515620 RNF135Q8IUD6 432 aa12.39□□□□□ -0.43
CLDND1-231ENST00000515620 DNERQ8NFT8 737 aa12.39□□□□□ -0.43
CLDND1-231ENST00000515620 DCAF4Q8WV16 495 aa12.39□□□□□ -0.43
CLDND1-231ENST00000515620 YME1L1Q96TA2 773 aa12.39□□□□□ -0.43
CLDND1-231ENST00000515620 NACAP1Q9BZK3 213 aa12.39□□□□□ -0.43
CLDND1-231ENST00000515620 IL17RBQ9NRM6 502 aa12.39□□□□□ -0.43
CLDND1-231ENST00000515620 FRMPD2Q68DX3 1309 aaPredicted RBP12.38□□□□□ -0.43
CLDND1-231ENST00000515620 TECTAO75443 2155 aa12.38□□□□□ -0.43
CLDND1-231ENST00000515620 PATL2C9JE40 543 aaKnown RBP12.38□□□□□ -0.43
CLDND1-231ENST00000515620 GFRA3O60609 400 aa12.38□□□□□ -0.43
CLDND1-231ENST00000515620 ZNF286BP0CG31 522 aa12.38□□□□□ -0.43
CLDND1-231ENST00000515620 CASTP20810 708 aaKnown RBP12.38□□□□□ -0.43
CLDND1-231ENST00000515620 LTBRP36941 435 aa12.38□□□□□ -0.43
CLDND1-231ENST00000515620 PSEN2P49810 448 aa12.38□□□□□ -0.43
CLDND1-231ENST00000515620 MKRN4PQ13434 485 aaPredicted RBP12.38□□□□□ -0.43
CLDND1-231ENST00000515620 CCDC62Q6P9F0 684 aa12.38□□□□□ -0.43
CLDND1-231ENST00000515620 SEPT14Q6ZU15 432 aa12.38□□□□□ -0.43
CLDND1-231ENST00000515620 TMEM192Q8IY95 271 aa12.38□□□□□ -0.43
CLDND1-231ENST00000515620 DBF4BQ8NFT6 615 aa12.38□□□□□ -0.43
CLDND1-231ENST00000515620 NAPBQ9H115 298 aa12.38□□□□□ -0.43
CLDND1-231ENST00000515620 GPCPD1Q9NPB8 672 aa12.38□□□□□ -0.43
CLDND1-231ENST00000515620 FAM86C1Q9NVL1 165 aa12.38□□□□□ -0.43
CLDND1-231ENST00000515620 EMSYQ7Z589 1322 aa12.37□□□□□ -0.43
CLDND1-231ENST00000515620 ZDBF2Q9HCK1 2354 aa12.37□□□□□ -0.43
CLDND1-231ENST00000515620 TMEM221A6NGB7 291 aa12.37□□□□□ -0.43
CLDND1-231ENST00000515620 B4DLN1 442 aa12.37□□□□□ -0.43
CLDND1-231ENST00000515620 M0R296 226 aa12.37□□□□□ -0.43
CLDND1-231ENST00000515620 MBTPS2O43462 519 aa12.37□□□□□ -0.43
CLDND1-231ENST00000515620 SMARCA5O60264 1052 aaPredicted RBP12.37□□□□□ -0.43
CLDND1-231ENST00000515620 ZFYP08048 801 aaPredicted RBP12.37□□□□□ -0.43
CLDND1-231ENST00000515620 MRPL12P52815 198 aaKnown RBP12.37□□□□□ -0.43
CLDND1-231ENST00000515620 ZNF200P98182 395 aaPredicted RBP12.37□□□□□ -0.43
CLDND1-231ENST00000515620 DLX2Q07687 328 aaPredicted RBP12.37□□□□□ -0.43
CLDND1-231ENST00000515620 TCF15Q12870 199 aa12.37□□□□□ -0.43
CLDND1-231ENST00000515620 MFSD10Q14728 455 aa12.37□□□□□ -0.43
CLDND1-231ENST00000515620 DGKDQ16760 1214 aa12.37□□□□□ -0.43
CLDND1-231ENST00000515620 TSHZ3Q63HK5 1081 aa12.37□□□□□ -0.43
CLDND1-231ENST00000515620 BTNL9Q6UXG8 535 aa12.37□□□□□ -0.43
CLDND1-231ENST00000515620 SUGP1Q8IWZ8 645 aaKnown RBP12.37□□□□□ -0.43
CLDND1-231ENST00000515620 EDAQ92838 391 aa12.37□□□□□ -0.43
CLDND1-231ENST00000515620 PBXIP1Q96AQ6 731 aa12.37□□□□□ -0.43
CLDND1-231ENST00000515620 KATNAL1Q9BW62 490 aa12.37□□□□□ -0.43
CLDND1-231ENST00000515620 LRRCC1Q9C099 1032 aa12.37□□□□□ -0.43
CLDND1-231ENST00000515620 INCENPQ9NQS7 918 aa12.37□□□□□ -0.43
CLDND1-231ENST00000515620 ECHDC1Q9NTX5 307 aa12.37□□□□□ -0.43
CLDND1-231ENST00000515620 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.37□□□□□ -0.43
CLDND1-231ENST00000515620 MICAL3Q7RTP6 2002 aa12.37□□□□□ -0.43
CLDND1-231ENST00000515620 USP34Q70CQ2 3546 aa12.36□□□□□ -0.43
CLDND1-231ENST00000515620 COL4A6Q14031 1691 aa12.36□□□□□ -0.43
CLDND1-231ENST00000515620 CACNA1AO00555 2505 aa12.36□□□□□ -0.43
CLDND1-231ENST00000515620 STXBP3O00186 592 aa12.36□□□□□ -0.43
CLDND1-231ENST00000515620 NCK2O43639 380 aa12.36□□□□□ -0.43
CLDND1-231ENST00000515620 RANBP6O60518 1105 aaKnown RBP12.36□□□□□ -0.43
CLDND1-231ENST00000515620 TBX10O75333 385 aa12.36□□□□□ -0.43
CLDND1-231ENST00000515620 UPP2O95045 317 aa12.36□□□□□ -0.43
CLDND1-231ENST00000515620 CSPG5O95196 566 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms