RNA–Protein interactions for RNA: ENST00000515594.5

PHF3-212, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 3,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-212ENST00000515594 SBK1Q52WX2 424 aa14.31□□□□□ -0.12
PHF3-212ENST00000515594 NBPF5PQ86XG9 351 aaPredicted RBP14.31□□□□□ -0.12
PHF3-212ENST00000515594 ZNF652Q9Y2D9 606 aa14.31□□□□□ -0.12
PHF3-212ENST00000515594 GRIN2DO15399 1336 aa14.31□□□□□ -0.12
PHF3-212ENST00000515594 ZEB2O60315 1214 aa14.31□□□□□ -0.12
PHF3-212ENST00000515594 LDHBP07195 334 aaKnown RBP14.31□□□□□ -0.12
PHF3-212ENST00000515594 TUBB4BP68371 445 aa14.31□□□□□ -0.12
PHF3-212ENST00000515594 CACNA2D4Q7Z3S7 1137 aa14.31□□□□□ -0.12
PHF3-212ENST00000515594 ZSCAN29Q8IWY8 852 aaPredicted RBP14.31□□□□□ -0.12
PHF3-212ENST00000515594 TRIM58Q8NG06 486 aa14.31□□□□□ -0.12
PHF3-212ENST00000515594 BAP1Q92560 729 aa14.31□□□□□ -0.12
PHF3-212ENST00000515594 CEP95Q96GE4 821 aa14.31□□□□□ -0.12
PHF3-212ENST00000515594 NUP58Q9BVL2 599 aa14.31□□□□□ -0.12
PHF3-212ENST00000515594 ANO9A1A5B4 782 aa14.3□□□□□ -0.12
PHF3-212ENST00000515594 TLR2O60603 784 aa14.3□□□□□ -0.12
PHF3-212ENST00000515594 USO1O60763 962 aaKnown RBP14.3□□□□□ -0.12
PHF3-212ENST00000515594 MAGEA9P43362 315 aa14.3□□□□□ -0.12
PHF3-212ENST00000515594 KCNMA1Q12791 1236 aa14.3□□□□□ -0.12
PHF3-212ENST00000515594 TTC31Q49AM3 519 aaPredicted RBP14.3□□□□□ -0.12
PHF3-212ENST00000515594 KLHDC7AQ5VTJ3 777 aa14.3□□□□□ -0.12
PHF3-212ENST00000515594 KAT2BQ92831 832 aa14.3□□□□□ -0.12
PHF3-212ENST00000515594 ZIM3Q96PE6 472 aa14.3□□□□□ -0.12
PHF3-212ENST00000515594 EYA3Q99504 573 aa14.3□□□□□ -0.12
PHF3-212ENST00000515594 C7orf25Q9BPX7 421 aa14.3□□□□□ -0.12
PHF3-212ENST00000515594 ZMYND12Q9H0C1 365 aa14.3□□□□□ -0.12
PHF3-212ENST00000515594 SH3GLB2Q9NR46 395 aa14.3□□□□□ -0.12
PHF3-212ENST00000515594 CENPPQ6IPU0 288 aa14.3□□□□□ -0.12
PHF3-212ENST00000515594 C8orf74Q6P047 294 aa14.3□□□□□ -0.12
PHF3-212ENST00000515594 DDX12PQ92771 950 aa14.3□□□□□ -0.12
PHF3-212ENST00000515594 CAPS2Q9BXY5 557 aa14.3□□□□□ -0.12
PHF3-212ENST00000515594 TNNI2P48788 182 aa14.3□□□□□ -0.12
PHF3-212ENST00000515594 GUCY2DQ02846 1103 aa14.3□□□□□ -0.12
PHF3-212ENST00000515594 FBXW10Q5XX13 1052 aa14.3□□□□□ -0.12
PHF3-212ENST00000515594 SV2BQ7L1I2 683 aa14.3□□□□□ -0.12
PHF3-212ENST00000515594 SNX29Q8TEQ0 813 aa14.3□□□□□ -0.12
PHF3-212ENST00000515594 NLRP3Q96P20 1036 aa14.3□□□□□ -0.12
PHF3-212ENST00000515594 PALMO75781 387 aa14.29□□□□□ -0.12
PHF3-212ENST00000515594 TUBBP07437 444 aa14.29□□□□□ -0.12
PHF3-212ENST00000515594 POLR2FP61218 127 aaKnown RBP14.29□□□□□ -0.12
PHF3-212ENST00000515594 CALCRLQ16602 461 aa14.29□□□□□ -0.12
PHF3-212ENST00000515594 CNNM4Q6P4Q7 775 aa14.29□□□□□ -0.12
PHF3-212ENST00000515594 LARP4BQ92615 738 aaKnown RBP14.29□□□□□ -0.12
PHF3-212ENST00000515594 CALML4Q96GE6 196 aa14.29□□□□□ -0.12
PHF3-212ENST00000515594 CDK5RAP3Q96JB5 506 aa14.29□□□□□ -0.12
PHF3-212ENST00000515594 CCDC43Q96MW1 224 aaKnown RBP14.29□□□□□ -0.12
PHF3-212ENST00000515594 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.29□□□□□ -0.12
PHF3-212ENST00000515594 FAM107BQ9H098 131 aa14.29□□□□□ -0.12
PHF3-212ENST00000515594 BCAS3Q9H6U6 928 aa14.29□□□□□ -0.12
PHF3-212ENST00000515594 EPB41L5Q9HCM4 733 aa14.29□□□□□ -0.12
PHF3-212ENST00000515594 GPCPD1Q9NPB8 672 aa14.29□□□□□ -0.12
PHF3-212ENST00000515594 STIM2Q9P246 746 aa14.29□□□□□ -0.12
PHF3-212ENST00000515594 KLRC1P26715 233 aa14.29□□□□□ -0.12
PHF3-212ENST00000515594 GUCY1A3Q02108 690 aa14.29□□□□□ -0.12
PHF3-212ENST00000515594 HGSNATQ68CP4 663 aa14.29□□□□□ -0.12
PHF3-212ENST00000515594 LRRC55Q6ZSA7 311 aa14.29□□□□□ -0.12
PHF3-212ENST00000515594 REXO1Q8N1G1 1221 aaKnown RBP14.29□□□□□ -0.12
PHF3-212ENST00000515594 CCDC47Q96A33 483 aaKnown RBP14.29□□□□□ -0.12
PHF3-212ENST00000515594 ZHX3Q9H4I2 956 aa14.29□□□□□ -0.12
PHF3-212ENST00000515594 HYOU1Q9Y4L1 999 aa14.29□□□□□ -0.12
PHF3-212ENST00000515594 RAD21O60216 631 aa14.28□□□□□ -0.12
PHF3-212ENST00000515594 CDK8P49336 464 aa14.28□□□□□ -0.12
PHF3-212ENST00000515594 EHHADHQ08426 723 aa14.28□□□□□ -0.12
PHF3-212ENST00000515594 FAM114A1Q8IWE2 563 aa14.28□□□□□ -0.12
PHF3-212ENST00000515594 KLHL7Q8IXQ5 586 aa14.28□□□□□ -0.12
PHF3-212ENST00000515594 MMGT1Q8N4V1 131 aa14.28□□□□□ -0.12
PHF3-212ENST00000515594 RETREG2Q8NC44 543 aa14.28□□□□□ -0.12
PHF3-212ENST00000515594 KRT12Q99456 494 aa14.28□□□□□ -0.12
PHF3-212ENST00000515594 CENPHQ9H3R5 247 aa14.28□□□□□ -0.12
PHF3-212ENST00000515594 CCDC88AQ3V6T2 1871 aa14.28□□□□□ -0.12
PHF3-212ENST00000515594 ROBO1Q9Y6N7 1651 aa14.28□□□□□ -0.12
PHF3-212ENST00000515594 TRAF5O00463 557 aa14.28□□□□□ -0.12
PHF3-212ENST00000515594 BACH1O14867 736 aa14.28□□□□□ -0.12
PHF3-212ENST00000515594 SLC16A2P36021 539 aa14.28□□□□□ -0.12
PHF3-212ENST00000515594 SOGA3Q5TF21 947 aa14.28□□□□□ -0.12
PHF3-212ENST00000515594 FNBP4Q8N3X1 1017 aaPredicted RBP14.28□□□□□ -0.12
PHF3-212ENST00000515594 NOC3LQ8WTT2 800 aaKnown RBP14.28□□□□□ -0.12
PHF3-212ENST00000515594 TBC1D5Q92609 795 aa14.28□□□□□ -0.12
PHF3-212ENST00000515594 ADAMTS1Q9UHI8 967 aa14.28□□□□□ -0.12
PHF3-212ENST00000515594 FAM169AQ9Y6X4 670 aa14.28□□□□□ -0.12
PHF3-212ENST00000515594 HEXIM1O94992 359 aaKnown RBP14.28□□□□□ -0.12
PHF3-212ENST00000515594 ACTN1P12814 892 aa14.28□□□□□ -0.12
PHF3-212ENST00000515594 MCM3P25205 808 aa14.28□□□□□ -0.12
PHF3-212ENST00000515594 PICALMQ13492 652 aa14.28□□□□□ -0.12
PHF3-212ENST00000515594 MAN2A1Q16706 1144 aa14.28□□□□□ -0.12
PHF3-212ENST00000515594 FAM133AQ8N9E0 248 aa14.28□□□□□ -0.12
PHF3-212ENST00000515594 DAGLBQ8NCG7 672 aa14.28□□□□□ -0.12
PHF3-212ENST00000515594 OR2W6PQ8NHA6 318 aa14.28□□□□□ -0.12
PHF3-212ENST00000515594 RPGRIP1Q96KN7 1286 aa14.28□□□□□ -0.12
PHF3-212ENST00000515594 C6orf50Q9HD87 102 aa14.28□□□□□ -0.12
PHF3-212ENST00000515594 LAMB2P55268 1798 aa14.28□□□□□ -0.12
PHF3-212ENST00000515594 SNED1Q8TER0 1413 aa14.27□□□□□ -0.12
PHF3-212ENST00000515594 NOL4O94818 638 aa14.27□□□□□ -0.12
PHF3-212ENST00000515594 PRPHP41219 470 aa14.27□□□□□ -0.12
PHF3-212ENST00000515594 BTDP43251 543 aa14.27□□□□□ -0.12
PHF3-212ENST00000515594 RAPGEF1Q13905 1077 aa14.27□□□□□ -0.12
PHF3-212ENST00000515594 KRT25Q7Z3Z0 450 aa14.27□□□□□ -0.12
PHF3-212ENST00000515594 DDX42Q86XP3 938 aaKnown RBP eCLIP14.27□□□□□ -0.12
PHF3-212ENST00000515594 ALS2CR12Q96Q35 445 aa14.27□□□□□ -0.12
PHF3-212ENST00000515594 LSM14BQ9BX40 385 aaKnown RBP14.27□□□□□ -0.12
PHF3-212ENST00000515594 SEC63Q9UGP8 760 aaKnown RBP14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms