RNA–Protein interactions for RNA: ENST00000515529.4

DDR1-279, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 340 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-279ENST00000515529 VPS54Q9P1Q0 977 aa29.76■■■□□ 2.35
DDR1-279ENST00000515529 PCDHA6Q9UN73 950 aa29.76■■■□□ 2.35
DDR1-279ENST00000515529 PCDHA8Q9Y5H6 950 aa29.76■■■□□ 2.35
DDR1-279ENST00000515529 BRCA2P51587 3418 aa29.76■■■□□ 2.35
DDR1-279ENST00000515529 DYNC1LI2O43237 492 aaPredicted RBP29.75■■■□□ 2.35
DDR1-279ENST00000515529 TXNP10599 105 aaKnown RBP29.75■■■□□ 2.35
DDR1-279ENST00000515529 GJA9P57773 515 aa29.75■■■□□ 2.35
DDR1-279ENST00000515529 XRRA1Q6P2D8 792 aa29.75■■■□□ 2.35
DDR1-279ENST00000515529 WASF1Q92558 559 aa29.75■■■□□ 2.35
DDR1-279ENST00000515529 ZMYND12Q9H0C1 365 aa29.75■■■□□ 2.35
DDR1-279ENST00000515529 GNEQ9Y223 722 aaKnown RBP29.75■■■□□ 2.35
DDR1-279ENST00000515529 Q9Y3F1 56 aa29.75■■■□□ 2.35
DDR1-279ENST00000515529 MRVI1Q9Y6F6 885 aa29.75■■■□□ 2.35
DDR1-279ENST00000515529 STK36Q9NRP7 1315 aa29.74■■■□□ 2.35
DDR1-279ENST00000515529 ADAMTS4O75173 837 aa29.74■■■□□ 2.35
DDR1-279ENST00000515529 STAM2O75886 525 aa29.74■■■□□ 2.35
DDR1-279ENST00000515529 XBP1P17861 261 aa29.74■■■□□ 2.35
DDR1-279ENST00000515529 MNX1P50219 401 aaPredicted RBP29.74■■■□□ 2.35
DDR1-279ENST00000515529 NLRP5P59047 1200 aa29.74■■■□□ 2.35
DDR1-279ENST00000515529 AP3B2Q13367 1082 aa29.74■■■□□ 2.35
DDR1-279ENST00000515529 GNPTABQ3T906 1256 aa29.74■■■□□ 2.35
DDR1-279ENST00000515529 UPF3AQ9H1J1 476 aaKnown RBP29.74■■■□□ 2.35
DDR1-279ENST00000515529 SH2B1Q9NRF2 756 aaPredicted RBP29.74■■■□□ 2.35
DDR1-279ENST00000515529 GNASQ5JWF2 1037 aa29.73■■■□□ 2.35
DDR1-279ENST00000515529 PCNX4Q63HM2 1172 aa29.73■■■□□ 2.35
DDR1-279ENST00000515529 MCTP2Q6DN12 878 aa29.73■■■□□ 2.35
DDR1-279ENST00000515529 REXO1Q8N1G1 1221 aaKnown RBP29.73■■■□□ 2.35
DDR1-279ENST00000515529 PCSK9Q8NBP7 692 aaKnown RBP29.73■■■□□ 2.35
DDR1-279ENST00000515529 SENP6Q9GZR1 1112 aaPredicted RBP29.73■■■□□ 2.35
DDR1-279ENST00000515529 ORC3Q9UBD5 711 aaPredicted RBP29.73■■■□□ 2.35
DDR1-279ENST00000515529 ZEB2O60315 1214 aa29.72■■■□□ 2.35
DDR1-279ENST00000515529 KCNV1Q6PIU1 500 aa29.72■■■□□ 2.35
DDR1-279ENST00000515529 OR6J1Q8NGC5 347 aa29.72■■■□□ 2.35
DDR1-279ENST00000515529 TSEN34Q9BSV6 310 aaKnown RBP29.72■■■□□ 2.35
DDR1-279ENST00000515529 CST5P28325 142 aaPredicted RBP29.71■■■□□ 2.35
DDR1-279ENST00000515529 BRDTQ58F21 947 aaPredicted RBP29.71■■■□□ 2.35
DDR1-279ENST00000515529 JAKMIP3Q5VZ66 844 aa29.71■■■□□ 2.35
DDR1-279ENST00000515529 CCDC83Q8IWF9 413 aa29.71■■■□□ 2.35
DDR1-279ENST00000515529 FAM177A1Q8N128 213 aaPredicted RBP29.71■■■□□ 2.35
DDR1-279ENST00000515529 ZFP91Q96JP5 570 aaPredicted RBP29.71■■■□□ 2.35
DDR1-279ENST00000515529 ANO3Q9BYT9 981 aa29.71■■■□□ 2.35
DDR1-279ENST00000515529 CTDNEP1O95476 244 aa29.7■■■□□ 2.35
DDR1-279ENST00000515529 FSCN1Q16658 493 aaKnown RBP29.7■■■□□ 2.35
DDR1-279ENST00000515529 NLRX1Q86UT6 975 aa29.7■■■□□ 2.35
DDR1-279ENST00000515529 KLHDC9Q8NEP7 349 aa29.7■■■□□ 2.35
DDR1-279ENST00000515529 DPF3Q92784 378 aa29.7■■■□□ 2.35
DDR1-279ENST00000515529 TMEM260Q9NX78 707 aa29.7■■■□□ 2.35
DDR1-279ENST00000515529 RTEL1Q9NZ71 1219 aa29.7■■■□□ 2.35
DDR1-279ENST00000515529 MYADML2A6NDP7 307 aa29.69■■■□□ 2.34
DDR1-279ENST00000515529 MOXD2PA6NHM9 499 aa29.69■■■□□ 2.34
DDR1-279ENST00000515529 COL6A1P12109 1028 aa29.69■■■□□ 2.34
DDR1-279ENST00000515529 MRPS9P82933 396 aaKnown RBP29.69■■■□□ 2.34
DDR1-279ENST00000515529 KCNA10Q16322 511 aa29.69■■■□□ 2.34
DDR1-279ENST00000515529 LY6KQ17RY6 165 aa29.69■■■□□ 2.34
DDR1-279ENST00000515529 TMEM63BQ5T3F8 832 aa29.69■■■□□ 2.34
DDR1-279ENST00000515529 NSUN7Q8NE18 718 aaKnown RBP29.69■■■□□ 2.34
DDR1-279ENST00000515529 FERMT2Q96AC1 680 aa29.69■■■□□ 2.34
DDR1-279ENST00000515529 PGBD1Q96JS3 809 aa29.69■■■□□ 2.34
DDR1-279ENST00000515529 AIFM3Q96NN9 605 aa29.69■■■□□ 2.34
DDR1-279ENST00000515529 PHF24Q9UPV7 400 aa29.69■■■□□ 2.34
DDR1-279ENST00000515529 ARIH2O95376 493 aa29.68■■■□□ 2.34
DDR1-279ENST00000515529 GH1P01241 217 aa29.68■■■□□ 2.34
DDR1-279ENST00000515529 MCM2P49736 904 aa29.68■■■□□ 2.34
DDR1-279ENST00000515529 CLK2P49760 499 aaKnown RBP29.68■■■□□ 2.34
DDR1-279ENST00000515529 CPT1AP50416 773 aa29.68■■■□□ 2.34
DDR1-279ENST00000515529 BEX3Q00994 111 aa29.68■■■□□ 2.34
DDR1-279ENST00000515529 CCDC62Q6P9F0 684 aa29.68■■■□□ 2.34
DDR1-279ENST00000515529 COPS5Q92905 334 aa29.68■■■□□ 2.34
DDR1-279ENST00000515529 ALG1Q9BT22 464 aa29.68■■■□□ 2.34
DDR1-279ENST00000515529 RGS20O76081 388 aa29.67■■■□□ 2.34
DDR1-279ENST00000515529 TGFB3P10600 412 aa29.67■■■□□ 2.34
DDR1-279ENST00000515529 PTGS1P23219 599 aa29.67■■■□□ 2.34
DDR1-279ENST00000515529 ACLYP53396 1101 aa29.67■■■□□ 2.34
DDR1-279ENST00000515529 GALNT17Q6IS24 598 aa29.67■■■□□ 2.34
DDR1-279ENST00000515529 VTI1AQ96AJ9 217 aa29.67■■■□□ 2.34
DDR1-279ENST00000515529 INPP4AQ96PE3 977 aaPredicted RBP29.67■■■□□ 2.34
DDR1-279ENST00000515529 DDX41Q9UJV9 622 aaKnown RBP29.67■■■□□ 2.34
DDR1-279ENST00000515529 DTNBO60941 627 aa29.66■■■□□ 2.34
DDR1-279ENST00000515529 ASGR1P07306 291 aa29.66■■■□□ 2.34
DDR1-279ENST00000515529 NKX3-2P78367 333 aa29.66■■■□□ 2.34
DDR1-279ENST00000515529 IRX5P78411 483 aaPredicted RBP29.66■■■□□ 2.34
DDR1-279ENST00000515529 GLT1D1Q96MS3 346 aa29.66■■■□□ 2.34
DDR1-279ENST00000515529 LLPHQ9BRT6 129 aaKnown RBP29.66■■■□□ 2.34
DDR1-279ENST00000515529 PCDHA4Q9UN74 947 aa29.66■■■□□ 2.34
DDR1-279ENST00000515529 KIAA1217Q5T5P2 1943 aa29.66■■■□□ 2.34
DDR1-279ENST00000515529 A0A1W2PQ45 241 aaPredicted RBP29.65■■■□□ 2.34
DDR1-279ENST00000515529 A0A1W2PQY0 241 aa29.65■■■□□ 2.34
DDR1-279ENST00000515529 FIBPO43427 364 aa29.65■■■□□ 2.34
DDR1-279ENST00000515529 JAK2O60674 1132 aa29.65■■■□□ 2.34
DDR1-279ENST00000515529 ZNF76P36508 570 aa29.65■■■□□ 2.34
DDR1-279ENST00000515529 SREBF1P36956 1147 aa29.65■■■□□ 2.34
DDR1-279ENST00000515529 ATN1P54259 1190 aaPredicted RBP29.65■■■□□ 2.34
DDR1-279ENST00000515529 DHX37Q8IY37 1157 aaKnown RBP29.65■■■□□ 2.34
DDR1-279ENST00000515529 CDHR1Q96JP9 859 aa29.65■■■□□ 2.34
DDR1-279ENST00000515529 CTAGE5O15320 804 aa29.64■■■□□ 2.34
DDR1-279ENST00000515529 EVI5O60447 810 aa29.64■■■□□ 2.34
DDR1-279ENST00000515529 TRIM29Q14134 588 aa29.64■■■□□ 2.34
DDR1-279ENST00000515529 CCSAPQ6IQ19 270 aaPredicted RBP29.64■■■□□ 2.34
DDR1-279ENST00000515529 BLIDQ8IZY5 108 aa29.64■■■□□ 2.34
DDR1-279ENST00000515529 RASGRP4Q8TDF6 673 aa29.64■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms