RNA–Protein interactions for RNA: ENST00000515508.6

SPOP-220, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 2

Gene SPOP, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-220ENST00000515508 ZSWIM5Q9P217 1185 aa21.48■■□□□ 1.03
SPOP-220ENST00000515508 MRPL11Q9Y3B7 192 aaKnown RBP21.48■■□□□ 1.03
SPOP-220ENST00000515508 PRRC2BQ5JSZ5 2229 aaKnown RBP21.48■■□□□ 1.03
SPOP-220ENST00000515508 COL4A4P53420 1690 aaPredicted RBP21.47■■□□□ 1.03
SPOP-220ENST00000515508 PARP1P09874 1014 aaKnown RBP21.47■■□□□ 1.03
SPOP-220ENST00000515508 GHRHRQ02643 423 aa21.47■■□□□ 1.03
SPOP-220ENST00000515508 RBL2Q08999 1139 aa21.47■■□□□ 1.03
SPOP-220ENST00000515508 IMMTQ16891 758 aaKnown RBP21.47■■□□□ 1.03
SPOP-220ENST00000515508 GDF6Q6KF10 455 aaPredicted RBP21.47■■□□□ 1.03
SPOP-220ENST00000515508 HERC6Q8IVU3 1022 aa21.47■■□□□ 1.03
SPOP-220ENST00000515508 CCDC155Q8N6L0 562 aa21.47■■□□□ 1.03
SPOP-220ENST00000515508 EMID1Q96A84 441 aaPredicted RBP21.47■■□□□ 1.03
SPOP-220ENST00000515508 FTOQ9C0B1 505 aaKnown RBP eCLIP21.47■■□□□ 1.03
SPOP-220ENST00000515508 TSPYL2Q9H2G4 693 aaPredicted RBP21.47■■□□□ 1.03
SPOP-220ENST00000515508 CASTP20810 708 aaKnown RBP21.46■■□□□ 1.03
SPOP-220ENST00000515508 UHRF1Q96T88 793 aaPredicted RBP21.46■■□□□ 1.03
SPOP-220ENST00000515508 KRT23Q9C075 422 aa21.46■■□□□ 1.03
SPOP-220ENST00000515508 CNNM2Q9H8M5 875 aa21.46■■□□□ 1.03
SPOP-220ENST00000515508 DDX41Q9UJV9 622 aaKnown RBP21.46■■□□□ 1.03
SPOP-220ENST00000515508 MTCH2Q9Y6C9 303 aa21.46■■□□□ 1.03
SPOP-220ENST00000515508 OPLAHO14841 1288 aa21.45■■□□□ 1.02
SPOP-220ENST00000515508 ARHGEF15O94989 841 aa21.45■■□□□ 1.02
SPOP-220ENST00000515508 IGHDP01880 384 aa21.45■■□□□ 1.02
SPOP-220ENST00000515508 HSD17B4P51659 736 aa21.45■■□□□ 1.02
SPOP-220ENST00000515508 TAP1Q03518 808 aa21.45■■□□□ 1.02
SPOP-220ENST00000515508 DGKDQ16760 1214 aa21.45■■□□□ 1.02
SPOP-220ENST00000515508 ARHGEF16Q5VV41 709 aa21.45■■□□□ 1.02
SPOP-220ENST00000515508 MICALL1Q8N3F8 863 aa21.45■■□□□ 1.02
SPOP-220ENST00000515508 PXMP2Q9NR77 195 aa21.45■■□□□ 1.02
SPOP-220ENST00000515508 GTF2IRD1Q9UHL9 959 aa21.45■■□□□ 1.02
SPOP-220ENST00000515508 CTNNA3Q9UI47 895 aa21.45■■□□□ 1.02
SPOP-220ENST00000515508 MYH7BA7E2Y1 1941 aa21.45■■□□□ 1.02
SPOP-220ENST00000515508 EPOPA6NHQ4 379 aa21.44■■□□□ 1.02
SPOP-220ENST00000515508 DHX16O60231 1041 aaKnown RBP21.44■■□□□ 1.02
SPOP-220ENST00000515508 EIF3JO75822 258 aaKnown RBP21.44■■□□□ 1.02
SPOP-220ENST00000515508 EIF2AK2P19525 551 aaKnown RBP21.44■■□□□ 1.02
SPOP-220ENST00000515508 CHMP4BP1P59074 171 aa21.44■■□□□ 1.02
SPOP-220ENST00000515508 GPNMBQ14956 572 aa21.44■■□□□ 1.02
SPOP-220ENST00000515508 LRRC8DQ7L1W4 858 aa21.44■■□□□ 1.02
SPOP-220ENST00000515508 CHST3Q7LGC8 479 aa21.44■■□□□ 1.02
SPOP-220ENST00000515508 DHX38Q92620 1227 aaKnown RBP21.44■■□□□ 1.02
SPOP-220ENST00000515508 UBAC1Q9BSL1 405 aa21.44■■□□□ 1.02
SPOP-220ENST00000515508 KIF28PB7ZC32 967 aa21.43■■□□□ 1.02
SPOP-220ENST00000515508 RFXAPO00287 272 aa21.43■■□□□ 1.02
SPOP-220ENST00000515508 GTPBP6O43824 516 aaPredicted RBP21.43■■□□□ 1.02
SPOP-220ENST00000515508 PARNO95453 639 aaKnown RBP21.43■■□□□ 1.02
SPOP-220ENST00000515508 F2P00734 622 aa21.43■■□□□ 1.02
SPOP-220ENST00000515508 NR3C2P08235 984 aa21.43■■□□□ 1.02
SPOP-220ENST00000515508 HOXD8P13378 290 aaPredicted RBP21.43■■□□□ 1.02
SPOP-220ENST00000515508 SELPP16109 830 aa21.43■■□□□ 1.02
SPOP-220ENST00000515508 WDR5P61964 334 aaKnown RBP21.43■■□□□ 1.02
SPOP-220ENST00000515508 STAG2Q8N3U4 1231 aa21.43■■□□□ 1.02
SPOP-220ENST00000515508 IL27Q8NEV9 243 aa21.43■■□□□ 1.02
SPOP-220ENST00000515508 PPTC7Q8NI37 304 aa21.43■■□□□ 1.02
SPOP-220ENST00000515508 MTMR8Q96EF0 704 aa21.43■■□□□ 1.02
SPOP-220ENST00000515508 KATNAL1Q9BW62 490 aa21.43■■□□□ 1.02
SPOP-220ENST00000515508 AMNQ9BXJ7 453 aa21.43■■□□□ 1.02
SPOP-220ENST00000515508 CERS4Q9HA82 394 aa21.43■■□□□ 1.02
SPOP-220ENST00000515508 MRVI1Q9Y6F6 885 aa21.43■■□□□ 1.02
SPOP-220ENST00000515508 HAS3O00219 553 aa21.42■■□□□ 1.02
SPOP-220ENST00000515508 CFBP00751 764 aa21.42■■□□□ 1.02
SPOP-220ENST00000515508 CXCL10P02778 98 aa21.42■■□□□ 1.02
SPOP-220ENST00000515508 LAMC2Q13753 1193 aa21.42■■□□□ 1.02
SPOP-220ENST00000515508 SEC23AQ15436 765 aa21.42■■□□□ 1.02
SPOP-220ENST00000515508 IFIT1BQ5T764 474 aaKnown RBP21.42■■□□□ 1.02
SPOP-220ENST00000515508 IL25Q9H293 177 aa21.42■■□□□ 1.02
SPOP-220ENST00000515508 VAT1LQ9HCJ6 419 aa21.42■■□□□ 1.02
SPOP-220ENST00000515508 MAP3K20Q9NYL2 800 aaKnown RBP21.42■■□□□ 1.02
SPOP-220ENST00000515508 TCF20Q9UGU0 1960 aaKnown RBP21.41■■□□□ 1.02
SPOP-220ENST00000515508 PPP1R11O60927 126 aaPredicted RBP21.41■■□□□ 1.02
SPOP-220ENST00000515508 CKBP12277 381 aa21.41■■□□□ 1.02
SPOP-220ENST00000515508 BMP1P13497 986 aa21.41■■□□□ 1.02
SPOP-220ENST00000515508 KCNJ6P48051 423 aa21.41■■□□□ 1.02
SPOP-220ENST00000515508 PSEN2P49810 448 aa21.41■■□□□ 1.02
SPOP-220ENST00000515508 TFF2Q03403 129 aa21.41■■□□□ 1.02
SPOP-220ENST00000515508 AAK1Q2M2I8 961 aa21.41■■□□□ 1.02
SPOP-220ENST00000515508 CNKSR3Q6P9H4 555 aa21.41■■□□□ 1.02
SPOP-220ENST00000515508 STOX1Q6ZVD7 989 aa21.41■■□□□ 1.02
SPOP-220ENST00000515508 C7orf31Q8N865 590 aa21.41■■□□□ 1.02
SPOP-220ENST00000515508 ARNTL2Q8WYA1 636 aa21.41■■□□□ 1.02
SPOP-220ENST00000515508 PDCD2LQ9BRP1 358 aa21.41■■□□□ 1.02
SPOP-220ENST00000515508 HDAC6Q9UBN7 1215 aa21.41■■□□□ 1.02
SPOP-220ENST00000515508 MAD2L2Q9UI95 211 aa21.41■■□□□ 1.02
SPOP-220ENST00000515508 KLRF2D3W0D1 207 aa21.4■■□□□ 1.02
SPOP-220ENST00000515508 ZBTB5O15062 677 aa21.4■■□□□ 1.02
SPOP-220ENST00000515508 TLL1O43897 1013 aa21.4■■□□□ 1.02
SPOP-220ENST00000515508 NBNO60934 754 aa21.4■■□□□ 1.02
SPOP-220ENST00000515508 RGS20O76081 388 aa21.4■■□□□ 1.02
SPOP-220ENST00000515508 ZNF286BP0CG31 522 aa21.4■■□□□ 1.02
SPOP-220ENST00000515508 MFSD10Q14728 455 aa21.4■■□□□ 1.02
SPOP-220ENST00000515508 SAMD3Q8N6K7 520 aa21.4■■□□□ 1.02
SPOP-220ENST00000515508 PTK7Q13308 1070 aa21.39■■□□□ 1.01
SPOP-220ENST00000515508 KIAA0753Q2KHM9 967 aa21.39■■□□□ 1.01
SPOP-220ENST00000515508 TRIM71Q2Q1W2 868 aaKnown RBP21.39■■□□□ 1.01
SPOP-220ENST00000515508 KCNV1Q6PIU1 500 aa21.39■■□□□ 1.01
SPOP-220ENST00000515508 CYB5R4Q7L1T6 521 aa21.39■■□□□ 1.01
SPOP-220ENST00000515508 DHX37Q8IY37 1157 aaKnown RBP21.39■■□□□ 1.01
SPOP-220ENST00000515508 SIP14410 1827 aa21.39■■□□□ 1.01
SPOP-220ENST00000515508 PALM3A6NDB9 673 aaPredicted RBP21.38■■□□□ 1.01
SPOP-220ENST00000515508 LPXNO60711 386 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms