RNA–Protein interactions for RNA: ENST00000514934.1

SGCA-211, Transcript of sarcoglycan alpha, humanhuman

TSL 4

Gene SGCA, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-211ENST00000514934 TMEM240Q5SV17 173 aa17■□□□□ 0.31
SGCA-211ENST00000514934 CATIPQ7Z7H3 387 aa17■□□□□ 0.31
SGCA-211ENST00000514934 VSIG10LQ86VR7 867 aa17■□□□□ 0.31
SGCA-211ENST00000514934 PPP1R13LQ8WUF5 828 aa17■□□□□ 0.31
SGCA-211ENST00000514934 VTI1AQ96AJ9 217 aa17■□□□□ 0.31
SGCA-211ENST00000514934 SEZ6LQ9BYH1 1024 aa17■□□□□ 0.31
SGCA-211ENST00000514934 LRRC2Q9BYS8 371 aa17■□□□□ 0.31
SGCA-211ENST00000514934 TTYH1Q9H313 450 aaPredicted RBP17■□□□□ 0.31
SGCA-211ENST00000514934 ERICH2A1L162 156 aa16.99■□□□□ 0.31
SGCA-211ENST00000514934 ZEB2O60315 1214 aa16.99■□□□□ 0.31
SGCA-211ENST00000514934 EIF3JO75822 258 aaKnown RBP16.99■□□□□ 0.31
SGCA-211ENST00000514934 MMP3P08254 477 aa16.99■□□□□ 0.31
SGCA-211ENST00000514934 SMAD3P84022 425 aaKnown RBP16.99■□□□□ 0.31
SGCA-211ENST00000514934 SP2Q02086 613 aa16.99■□□□□ 0.31
SGCA-211ENST00000514934 STXBP2Q15833 593 aa16.99■□□□□ 0.31
SGCA-211ENST00000514934 SEPT14Q6ZU15 432 aa16.99■□□□□ 0.31
SGCA-211ENST00000514934 AFG1LQ8WV93 481 aa16.99■□□□□ 0.31
SGCA-211ENST00000514934 GPKOWQ92917 476 aaPredicted RBP eCLIP16.99■□□□□ 0.31
SGCA-211ENST00000514934 MTG1Q9BT17 334 aaPredicted RBP16.99■□□□□ 0.31
SGCA-211ENST00000514934 PPP1R12CQ9BZL4 782 aa16.99■□□□□ 0.31
SGCA-211ENST00000514934 TRMT13Q9NUP7 481 aaKnown RBP16.99■□□□□ 0.31
SGCA-211ENST00000514934 B4DLN1 442 aa16.98■□□□□ 0.31
SGCA-211ENST00000514934 CDC45O75419 566 aa16.98■□□□□ 0.31
SGCA-211ENST00000514934 MYL3P08590 195 aa16.98■□□□□ 0.31
SGCA-211ENST00000514934 RXRAP19793 462 aa16.98■□□□□ 0.31
SGCA-211ENST00000514934 MRPL12P52815 198 aaKnown RBP16.98■□□□□ 0.31
SGCA-211ENST00000514934 MRPS9P82933 396 aaKnown RBP16.98■□□□□ 0.31
SGCA-211ENST00000514934 FUT2Q10981 343 aa16.98■□□□□ 0.31
SGCA-211ENST00000514934 SEMA3FQ13275 785 aa16.98■□□□□ 0.31
SGCA-211ENST00000514934 NBPF20Q3BBV1 942 aa16.98■□□□□ 0.31
SGCA-211ENST00000514934 ARHGEF16Q5VV41 709 aa16.98■□□□□ 0.31
SGCA-211ENST00000514934 MPHOSPH6Q99547 160 aaKnown RBP16.98■□□□□ 0.31
SGCA-211ENST00000514934 MICAL3Q7RTP6 2002 aa16.97■□□□□ 0.31
SGCA-211ENST00000514934 MEIS2O14770 477 aa16.97■□□□□ 0.31
SGCA-211ENST00000514934 TLR3O15455 904 aaKnown RBP16.97■□□□□ 0.31
SGCA-211ENST00000514934 NFRKBQ6P4R8 1299 aa16.97■□□□□ 0.31
SGCA-211ENST00000514934 TMTC3Q6ZXV5 915 aa16.97■□□□□ 0.31
SGCA-211ENST00000514934 SESTD1Q86VW0 696 aa16.97■□□□□ 0.31
SGCA-211ENST00000514934 RAB11FIP4Q86YS3 637 aa16.97■□□□□ 0.31
SGCA-211ENST00000514934 CMTR1Q8N1G2 835 aaKnown RBP16.97■□□□□ 0.31
SGCA-211ENST00000514934 RNPC3Q96LT9 517 aaKnown RBP16.97■□□□□ 0.31
SGCA-211ENST00000514934 HIPK3Q9H422 1215 aa16.97■□□□□ 0.31
SGCA-211ENST00000514934 BCAS3Q9H6U6 928 aa16.97■□□□□ 0.31
SGCA-211ENST00000514934 SPTBN5Q9NRC6 3674 aaKnown RBP16.97■□□□□ 0.31
SGCA-211ENST00000514934 LOXHD1Q8IVV2 1947 aa16.96■□□□□ 0.31
SGCA-211ENST00000514934 HAS3O00219 553 aa16.96■□□□□ 0.31
SGCA-211ENST00000514934 PIK3CDO00329 1044 aa16.96■□□□□ 0.31
SGCA-211ENST00000514934 KPNA6O60684 536 aa16.96■□□□□ 0.31
SGCA-211ENST00000514934 GH1P01241 217 aa16.96■□□□□ 0.31
SGCA-211ENST00000514934 ACRP10323 421 aa16.96■□□□□ 0.31
SGCA-211ENST00000514934 CYP2C9P11712 490 aa16.96■□□□□ 0.31
SGCA-211ENST00000514934 PPIGQ13427 754 aaKnown RBP eCLIP16.96■□□□□ 0.31
SGCA-211ENST00000514934 MYSM1Q5VVJ2 828 aa16.96■□□□□ 0.31
SGCA-211ENST00000514934 CASC1Q6TDU7 716 aa16.96■□□□□ 0.31
SGCA-211ENST00000514934 ZFP91Q96JP5 570 aaPredicted RBP16.96■□□□□ 0.31
SGCA-211ENST00000514934 TCEANC2Q96MN5 208 aa16.96■□□□□ 0.31
SGCA-211ENST00000514934 IL23AQ9NPF7 189 aa16.96■□□□□ 0.31
SGCA-211ENST00000514934 FAM217BQ9NTX9 383 aaPredicted RBP16.96■□□□□ 0.31
SGCA-211ENST00000514934 CXXC1Q9P0U4 656 aaPredicted RBP16.96■□□□□ 0.31
SGCA-211ENST00000514934 BRPF3Q9ULD4 1205 aa16.96■□□□□ 0.31
SGCA-211ENST00000514934 STXBP5LQ9Y2K9 1186 aa16.96■□□□□ 0.31
SGCA-211ENST00000514934 CNTNAP5Q8WYK1 1306 aa16.96■□□□□ 0.3
SGCA-211ENST00000514934 GCOM1H8Y6P7 765 aaPredicted RBP16.95■□□□□ 0.3
SGCA-211ENST00000514934 RBAK-RBAKDNI3L0D1 243 aa16.95■□□□□ 0.3
SGCA-211ENST00000514934 F2P00734 622 aa16.95■□□□□ 0.3
SGCA-211ENST00000514934 POLR2MP0CAP2 368 aa16.95■□□□□ 0.3
SGCA-211ENST00000514934 UBA1P22314 1058 aaKnown RBP16.95■□□□□ 0.3
SGCA-211ENST00000514934 HIC1Q14526 733 aa16.95■□□□□ 0.3
SGCA-211ENST00000514934 APOA5Q6Q788 366 aa16.95■□□□□ 0.3
SGCA-211ENST00000514934 ZNF365Q70YC5 407 aa16.95■□□□□ 0.3
SGCA-211ENST00000514934 TMTC2Q8N394 836 aa16.95■□□□□ 0.3
SGCA-211ENST00000514934 CTCFLQ8NI51 663 aaPredicted RBP16.95■□□□□ 0.3
SGCA-211ENST00000514934 PIBF1Q8WXW3 757 aa16.95■□□□□ 0.3
SGCA-211ENST00000514934 INPP4AQ96PE3 977 aaPredicted RBP16.95■□□□□ 0.3
SGCA-211ENST00000514934 LZTS2Q9BRK4 669 aa16.95■□□□□ 0.3
SGCA-211ENST00000514934 KIF5BP33176 963 aa16.94■□□□□ 0.3
SGCA-211ENST00000514934 PTPN11Q06124 597 aaPredicted RBP16.94■□□□□ 0.3
SGCA-211ENST00000514934 GPNMBQ14956 572 aa16.94■□□□□ 0.3
SGCA-211ENST00000514934 CELF3Q5SZQ8 465 aaKnown RBP16.94■□□□□ 0.3
SGCA-211ENST00000514934 TYW1BQ6NUM6 668 aa16.94■□□□□ 0.3
SGCA-211ENST00000514934 USP17L6PQ6QN14 398 aa16.94■□□□□ 0.3
SGCA-211ENST00000514934 TMEM199Q8N511 208 aa16.94■□□□□ 0.3
SGCA-211ENST00000514934 FANCBQ8NB91 859 aa16.94■□□□□ 0.3
SGCA-211ENST00000514934 PPTC7Q8NI37 304 aa16.94■□□□□ 0.3
SGCA-211ENST00000514934 HERVK_113Q902F9 699 aa16.94■□□□□ 0.3
SGCA-211ENST00000514934 DHX38Q92620 1227 aaKnown RBP16.94■□□□□ 0.3
SGCA-211ENST00000514934 NEK1Q96PY6 1258 aa16.94■□□□□ 0.3
SGCA-211ENST00000514934 SEMA6BQ9H3T3 888 aa16.94■□□□□ 0.3
SGCA-211ENST00000514934 TELO2Q9Y4R8 837 aa16.94■□□□□ 0.3
SGCA-211ENST00000514934 MRVI1Q9Y6F6 885 aa16.94■□□□□ 0.3
SGCA-211ENST00000514934 NID2Q14112 1375 aa16.93■□□□□ 0.3
SGCA-211ENST00000514934 hCG_1642624A0A1W2PR95 340 aa16.93■□□□□ 0.3
SGCA-211ENST00000514934 MYCLP12524 364 aaPredicted RBP16.93■□□□□ 0.3
SGCA-211ENST00000514934 ICAM3P32942 547 aa16.93■□□□□ 0.3
SGCA-211ENST00000514934 CCL23P55773 120 aa16.93■□□□□ 0.3
SGCA-211ENST00000514934 TRAF1Q13077 416 aa16.93■□□□□ 0.3
SGCA-211ENST00000514934 HSDL1Q3SXM5 330 aa16.93■□□□□ 0.3
SGCA-211ENST00000514934 GDF6Q6KF10 455 aaPredicted RBP16.93■□□□□ 0.3
SGCA-211ENST00000514934 DHX32Q7L7V1 743 aaKnown RBP16.93■□□□□ 0.3
SGCA-211ENST00000514934 FCHSD1Q86WN1 690 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms