RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 CCDC82Q8N4S0 544 aa28.28■■■□□ 2.12
SNF8-213ENST00000514929 DDX41Q9UJV9 622 aaKnown RBP28.28■■■□□ 2.12
SNF8-213ENST00000514929 CCND2P30279 289 aa28.27■■■□□ 2.12
SNF8-213ENST00000514929 ARHGAP1Q07960 439 aa28.27■■■□□ 2.12
SNF8-213ENST00000514929 APOA5Q6Q788 366 aa28.27■■■□□ 2.12
SNF8-213ENST00000514929 TMTC3Q6ZXV5 915 aa28.27■■■□□ 2.12
SNF8-213ENST00000514929 VSIG10LQ86VR7 867 aa28.27■■■□□ 2.12
SNF8-213ENST00000514929 IL31RAQ8NI17 732 aa28.27■■■□□ 2.12
SNF8-213ENST00000514929 AFG1LQ8WV93 481 aa28.27■■■□□ 2.12
SNF8-213ENST00000514929 CUL5Q93034 780 aa28.27■■■□□ 2.12
SNF8-213ENST00000514929 TRPV6Q9H1D0 765 aa28.27■■■□□ 2.12
SNF8-213ENST00000514929 B4GALT4O60513 344 aa28.26■■■□□ 2.11
SNF8-213ENST00000514929 REC8O95072 547 aa28.26■■■□□ 2.11
SNF8-213ENST00000514929 EPHB4P54760 987 aa28.26■■■□□ 2.11
SNF8-213ENST00000514929 FAM47CQ5HY64 1035 aa28.26■■■□□ 2.11
SNF8-213ENST00000514929 SMARCC2Q8TAQ2 1214 aa28.26■■■□□ 2.11
SNF8-213ENST00000514929 ALDH8A1Q9H2A2 487 aaPredicted RBP28.26■■■□□ 2.11
SNF8-213ENST00000514929 FGD1P98174 961 aa28.25■■■□□ 2.11
SNF8-213ENST00000514929 KCNV1Q6PIU1 500 aa28.25■■■□□ 2.11
SNF8-213ENST00000514929 TMEM199Q8N511 208 aa28.25■■■□□ 2.11
SNF8-213ENST00000514929 HIPK3Q9H422 1215 aa28.25■■■□□ 2.11
SNF8-213ENST00000514929 RBM28Q9NW13 759 aaKnown RBP28.25■■■□□ 2.11
SNF8-213ENST00000514929 PPP4R2Q9NY27 417 aa28.25■■■□□ 2.11
SNF8-213ENST00000514929 hCG_1642624A0A1W2PR95 340 aa28.24■■■□□ 2.11
SNF8-213ENST00000514929 ZBTB43O43298 467 aa28.24■■■□□ 2.11
SNF8-213ENST00000514929 MMP3P08254 477 aa28.24■■■□□ 2.11
SNF8-213ENST00000514929 HSPA4P34932 840 aa28.24■■■□□ 2.11
SNF8-213ENST00000514929 PPIGQ13427 754 aaKnown RBP eCLIP28.24■■■□□ 2.115e-7■■□□□ 11.4
SNF8-213ENST00000514929 NBPF20Q3BBV1 942 aa28.24■■■□□ 2.11
SNF8-213ENST00000514929 DHX37Q8IY37 1157 aaKnown RBP28.24■■■□□ 2.11
SNF8-213ENST00000514929 KCNB2Q92953 911 aa28.24■■■□□ 2.11
SNF8-213ENST00000514929 RNPC3Q96LT9 517 aaKnown RBP28.24■■■□□ 2.11
SNF8-213ENST00000514929 JAKMIP1Q96N16 626 aaKnown RBP28.24■■■□□ 2.11
SNF8-213ENST00000514929 BRPF3Q9ULD4 1205 aa28.24■■■□□ 2.11
SNF8-213ENST00000514929 RGS20O76081 388 aa28.23■■■□□ 2.11
SNF8-213ENST00000514929 SUPT20HL2P0C7V6 817 aa28.23■■■□□ 2.11
SNF8-213ENST00000514929 CYP2C18P33260 490 aa28.23■■■□□ 2.11
SNF8-213ENST00000514929 CHMP4BP1P59074 171 aa28.23■■■□□ 2.11
SNF8-213ENST00000514929 LAMC2Q13753 1193 aa28.23■■■□□ 2.11
SNF8-213ENST00000514929 RTN1Q16799 776 aa28.23■■■□□ 2.11
SNF8-213ENST00000514929 USP17L6PQ6QN14 398 aa28.23■■■□□ 2.11
SNF8-213ENST00000514929 ZFP91Q96JP5 570 aaPredicted RBP28.23■■■□□ 2.11
SNF8-213ENST00000514929 SNX14Q9Y5W7 946 aa28.23■■■□□ 2.11
SNF8-213ENST00000514929 KLF18A0A0U1RQI7 1052 aa28.22■■■□□ 2.11
SNF8-213ENST00000514929 CSF2RAP15509 400 aa28.22■■■□□ 2.11
SNF8-213ENST00000514929 CASTP20810 708 aaKnown RBP28.22■■■□□ 2.11
SNF8-213ENST00000514929 DEFB123Q8N688 67 aa28.22■■■□□ 2.11
SNF8-213ENST00000514929 EMID1Q96A84 441 aaPredicted RBP28.22■■■□□ 2.11
SNF8-213ENST00000514929 TRMT13Q9NUP7 481 aaKnown RBP28.22■■■□□ 2.11
SNF8-213ENST00000514929 NAP1L2Q9ULW6 460 aaPredicted RBP28.22■■■□□ 2.11
SNF8-213ENST00000514929 FRMPD4Q14CM0 1322 aa28.21■■■□□ 2.11
SNF8-213ENST00000514929 SCN10AQ9Y5Y9 1956 aa28.21■■■□□ 2.11
SNF8-213ENST00000514929 GOLGA8AA7E2F4 631 aa28.21■■■□□ 2.11
SNF8-213ENST00000514929 GOLGA8BA8MQT2 603 aa28.21■■■□□ 2.11
SNF8-213ENST00000514929 PIK3CDO00329 1044 aa28.21■■■□□ 2.11
SNF8-213ENST00000514929 CPA1P15085 419 aa28.21■■■□□ 2.11
SNF8-213ENST00000514929 DGKDQ16760 1214 aa28.21■■■□□ 2.11
SNF8-213ENST00000514929 GNPTABQ3T906 1256 aa28.21■■■□□ 2.11
SNF8-213ENST00000514929 ERICH6BQ5W0A0 696 aa28.21■■■□□ 2.11
SNF8-213ENST00000514929 NFRKBQ6P4R8 1299 aa28.21■■■□□ 2.11
SNF8-213ENST00000514929 BLOC1S2Q6QNY1 142 aa28.21■■■□□ 2.11
SNF8-213ENST00000514929 HEATR3Q7Z4Q2 680 aa28.21■■■□□ 2.11
SNF8-213ENST00000514929 PPP1R13LQ8WUF5 828 aa28.21■■■□□ 2.11
SNF8-213ENST00000514929 PSTPIP2Q9H939 334 aa28.21■■■□□ 2.11
SNF8-213ENST00000514929 MEIS2O14770 477 aa28.2■■■□□ 2.1
SNF8-213ENST00000514929 STAM2O75886 525 aa28.2■■■□□ 2.1
SNF8-213ENST00000514929 TGFB3P10600 412 aa28.2■■■□□ 2.1
SNF8-213ENST00000514929 NOC4LQ9BVI4 516 aaKnown RBP28.2■■■□□ 2.1
SNF8-213ENST00000514929 UMODL1Q5DID0 1318 aa28.19■■■□□ 2.1
SNF8-213ENST00000514929 CNTNAP5Q8WYK1 1306 aa28.19■■■□□ 2.1
SNF8-213ENST00000514929 GGPS1O95749 300 aa28.19■■■□□ 2.1
SNF8-213ENST00000514929 CENPBP07199 599 aaPredicted RBP28.19■■■□□ 2.1
SNF8-213ENST00000514929 PTPN11Q06124 597 aaPredicted RBP28.19■■■□□ 2.1
SNF8-213ENST00000514929 Q6ZUG5 572 aa28.19■■■□□ 2.1
SNF8-213ENST00000514929 Q7L0L9 218 aa28.19■■■□□ 2.1
SNF8-213ENST00000514929 PPTC7Q8NI37 304 aa28.19■■■□□ 2.1
SNF8-213ENST00000514929 BUD13Q9BRD0 619 aaKnown RBP eCLIP28.19■■■□□ 2.1
SNF8-213ENST00000514929 SORBS3O60504 671 aa28.18■■■□□ 2.1
SNF8-213ENST00000514929 CYP2C9P11712 490 aa28.18■■■□□ 2.1
SNF8-213ENST00000514929 UBA1P22314 1058 aaKnown RBP28.18■■■□□ 2.1
SNF8-213ENST00000514929 CCL23P55773 120 aa28.18■■■□□ 2.1
SNF8-213ENST00000514929 MRPS9P82933 396 aaKnown RBP28.18■■■□□ 2.1
SNF8-213ENST00000514929 CELF3Q5SZQ8 465 aaKnown RBP28.18■■■□□ 2.1
SNF8-213ENST00000514929 MYSM1Q5VVJ2 828 aa28.18■■■□□ 2.1
SNF8-213ENST00000514929 GPKOWQ92917 476 aaPredicted RBP eCLIP28.18■■■□□ 2.1
SNF8-213ENST00000514929 SPATA33Q96N06 139 aa28.17■■■□□ 2.1
SNF8-213ENST00000514929 MLXIPQ9HAP2 919 aa28.17■■■□□ 2.1
SNF8-213ENST00000514929 RTEL1Q9NZ71 1219 aa28.17■■■□□ 2.1
SNF8-213ENST00000514929 NOD1Q9Y239 953 aa28.17■■■□□ 2.1
SNF8-213ENST00000514929 MYH7BA7E2Y1 1941 aa28.16■■■□□ 2.1
SNF8-213ENST00000514929 ACRP10323 421 aa28.16■■■□□ 2.1
SNF8-213ENST00000514929 PSMA5P28066 241 aa28.16■■■□□ 2.1
SNF8-213ENST00000514929 RCAN1P53805 252 aa28.16■■■□□ 2.1
SNF8-213ENST00000514929 SP2Q02086 613 aa28.16■■■□□ 2.1
SNF8-213ENST00000514929 APOBRQ0VD83 1088 aa28.16■■■□□ 2.1
SNF8-213ENST00000514929 PCNX4Q63HM2 1172 aa28.16■■■□□ 2.1
SNF8-213ENST00000514929 PSRC1Q6PGN9 363 aaPredicted RBP28.16■■■□□ 2.1
SNF8-213ENST00000514929 C16orf59Q7L2K0 433 aa28.16■■■□□ 2.1
SNF8-213ENST00000514929 KAT2BQ92831 832 aa28.16■■■□□ 2.1
SNF8-213ENST00000514929 BRF1Q92994 677 aa28.16■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms