RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 NIPA1Q7RTP0 329 aa13.65□□□□□ -0.22
PDLIM5-220ENST00000514830 NEK8Q86SG6 692 aa13.65□□□□□ -0.22
PDLIM5-220ENST00000514830 DPP9Q86TI2 863 aa13.65□□□□□ -0.22
PDLIM5-220ENST00000514830 VSIG10LQ86VR7 867 aa13.65□□□□□ -0.22
PDLIM5-220ENST00000514830 CD99L2Q8TCZ2 262 aa13.65□□□□□ -0.22
PDLIM5-220ENST00000514830 TBCKQ8TEA7 893 aa13.65□□□□□ -0.22
PDLIM5-220ENST00000514830 MAML3Q96JK9 1138 aa13.65□□□□□ -0.22
PDLIM5-220ENST00000514830 ARHGAP39Q9C0H5 1083 aa13.65□□□□□ -0.22
PDLIM5-220ENST00000514830 NOL7Q9UMY1 257 aaKnown RBP13.65□□□□□ -0.22
PDLIM5-220ENST00000514830 MORC2Q9Y6X9 1032 aaPredicted RBP13.65□□□□□ -0.22
PDLIM5-220ENST00000514830 SYNGAP1Q96PV0 1343 aa13.64□□□□□ -0.23
PDLIM5-220ENST00000514830 PGK2P07205 417 aa13.64□□□□□ -0.23
PDLIM5-220ENST00000514830 NR3C2P08235 984 aa13.64□□□□□ -0.23
PDLIM5-220ENST00000514830 CCND2P30279 289 aa13.64□□□□□ -0.23
PDLIM5-220ENST00000514830 TOB1P50616 345 aaPredicted RBP13.64□□□□□ -0.23
PDLIM5-220ENST00000514830 INF2Q27J81 1249 aa13.64□□□□□ -0.23
PDLIM5-220ENST00000514830 FERMT3Q86UX7 667 aa13.64□□□□□ -0.23
PDLIM5-220ENST00000514830 SRRDQ9UH36 339 aa13.64□□□□□ -0.23
PDLIM5-220ENST00000514830 FAM205CA6NFA0 338 aa13.63□□□□□ -0.23
PDLIM5-220ENST00000514830 EIF3JO75822 258 aaKnown RBP13.63□□□□□ -0.23
PDLIM5-220ENST00000514830 MRPS9P82933 396 aaKnown RBP13.63□□□□□ -0.23
PDLIM5-220ENST00000514830 Q4G0T1 1027 aa13.63□□□□□ -0.23
PDLIM5-220ENST00000514830 IL31RAQ8NI17 732 aa13.63□□□□□ -0.23
PDLIM5-220ENST00000514830 NPLOC4Q8TAT6 608 aa13.63□□□□□ -0.23
PDLIM5-220ENST00000514830 PGBD1Q96JS3 809 aa13.63□□□□□ -0.23
PDLIM5-220ENST00000514830 INPP4AQ96PE3 977 aaPredicted RBP13.63□□□□□ -0.23
PDLIM5-220ENST00000514830 PURBQ96QR8 312 aaKnown RBP13.63□□□□□ -0.23
PDLIM5-220ENST00000514830 NRBP1Q9UHY1 535 aa13.63□□□□□ -0.23
PDLIM5-220ENST00000514830 UBIAD1Q9Y5Z9 338 aa13.63□□□□□ -0.23
PDLIM5-220ENST00000514830 IGLV3-22A0A075B6J6 115 aa13.62□□□□□ -0.23
PDLIM5-220ENST00000514830 MEIS1O00470 390 aa13.62□□□□□ -0.23
PDLIM5-220ENST00000514830 MAFGO15525 162 aa13.62□□□□□ -0.23
PDLIM5-220ENST00000514830 BMP15O95972 392 aa13.62□□□□□ -0.23
PDLIM5-220ENST00000514830 EIF2AK2P19525 551 aaKnown RBP13.62□□□□□ -0.23
PDLIM5-220ENST00000514830 FLT3LGP49771 235 aa13.62□□□□□ -0.23
PDLIM5-220ENST00000514830 SETQ01105 290 aaPredicted RBP13.62□□□□□ -0.23
PDLIM5-220ENST00000514830 STXBP2Q15833 593 aa13.62□□□□□ -0.23
PDLIM5-220ENST00000514830 CEP55Q53EZ4 464 aa13.62□□□□□ -0.23
PDLIM5-220ENST00000514830 CLEC17AQ6ZS10 378 aa13.62□□□□□ -0.23
PDLIM5-220ENST00000514830 PXYLP1Q8TE99 480 aa13.62□□□□□ -0.23
PDLIM5-220ENST00000514830 GPRASP2Q96D09 838 aa13.62□□□□□ -0.23
PDLIM5-220ENST00000514830 TINF2Q9BSI4 451 aa13.62□□□□□ -0.23
PDLIM5-220ENST00000514830 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.62□□□□□ -0.23
PDLIM5-220ENST00000514830 POLR3EQ9NVU0 708 aa13.62□□□□□ -0.23
PDLIM5-220ENST00000514830 RBM47A0AV96 593 aaKnown RBP13.61□□□□□ -0.23
PDLIM5-220ENST00000514830 LAD1O00515 517 aa13.61□□□□□ -0.23
PDLIM5-220ENST00000514830 TBX3O15119 743 aa13.61□□□□□ -0.23
PDLIM5-220ENST00000514830 ICAM3P32942 547 aa13.61□□□□□ -0.23
PDLIM5-220ENST00000514830 PRKCZQ05513 592 aa13.61□□□□□ -0.23
PDLIM5-220ENST00000514830 PDE4DQ08499 809 aa13.61□□□□□ -0.23
PDLIM5-220ENST00000514830 TTC38Q5R3I4 469 aa13.61□□□□□ -0.23
PDLIM5-220ENST00000514830 ARMCX2Q7L311 632 aa13.61□□□□□ -0.23
PDLIM5-220ENST00000514830 LENG9Q96B70 501 aa13.61□□□□□ -0.23
PDLIM5-220ENST00000514830 ZNF396Q96N95 335 aaPredicted RBP13.61□□□□□ -0.23
PDLIM5-220ENST00000514830 MXRA8Q9BRK3 442 aa13.61□□□□□ -0.23
PDLIM5-220ENST00000514830 KATNBL1Q9H079 304 aa13.61□□□□□ -0.23
PDLIM5-220ENST00000514830 VTA1Q9NP79 307 aa13.61□□□□□ -0.23
PDLIM5-220ENST00000514830 GABRQQ9UN88 632 aa13.61□□□□□ -0.23
PDLIM5-220ENST00000514830 FAM86B1E9PN63 330 aa13.6□□□□□ -0.23
PDLIM5-220ENST00000514830 RGS20O76081 388 aa13.6□□□□□ -0.23
PDLIM5-220ENST00000514830 FAM86B2P0C5J1 330 aa13.6□□□□□ -0.23
PDLIM5-220ENST00000514830 TGFB3P10600 412 aa13.6□□□□□ -0.23
PDLIM5-220ENST00000514830 ITGB5P18084 799 aa13.6□□□□□ -0.23
PDLIM5-220ENST00000514830 NASPP49321 788 aaPredicted RBP13.6□□□□□ -0.23
PDLIM5-220ENST00000514830 CACNB1Q02641 598 aaPredicted RBP13.6□□□□□ -0.23
PDLIM5-220ENST00000514830 LETM2Q2VYF4 491 aa13.6□□□□□ -0.23
PDLIM5-220ENST00000514830 GNPTABQ3T906 1256 aa13.6□□□□□ -0.23
PDLIM5-220ENST00000514830 KCNV1Q6PIU1 500 aa13.6□□□□□ -0.23
PDLIM5-220ENST00000514830 FBXO46Q6PJ61 603 aaPredicted RBP13.6□□□□□ -0.23
PDLIM5-220ENST00000514830 OTOP1Q7RTM1 612 aa13.6□□□□□ -0.23
PDLIM5-220ENST00000514830 CDHR1Q96JP9 859 aa13.6□□□□□ -0.23
PDLIM5-220ENST00000514830 ABHD16BQ9H3Z7 469 aa13.6□□□□□ -0.23
PDLIM5-220ENST00000514830 JADE2Q9NQC1 790 aa13.6□□□□□ -0.23
PDLIM5-220ENST00000514830 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.6□□□□□ -0.23
PDLIM5-220ENST00000514830 RTEL1Q9NZ71 1219 aa13.6□□□□□ -0.23
PDLIM5-220ENST00000514830 CFAP45Q9UL16 551 aa13.6□□□□□ -0.23
PDLIM5-220ENST00000514830 CEP131Q9UPN4 1083 aa13.6□□□□□ -0.23
PDLIM5-220ENST00000514830 WDR81Q562E7 1941 aa13.59□□□□□ -0.23
PDLIM5-220ENST00000514830 WNT7AO00755 349 aa13.59□□□□□ -0.23
PDLIM5-220ENST00000514830 CCNT1O60563 726 aaKnown RBP13.59□□□□□ -0.23
PDLIM5-220ENST00000514830 TDP2O95551 362 aa13.59□□□□□ -0.23
PDLIM5-220ENST00000514830 YEATS4O95619 227 aa13.59□□□□□ -0.23
PDLIM5-220ENST00000514830 SNAI1O95863 264 aaPredicted RBP13.59□□□□□ -0.23
PDLIM5-220ENST00000514830 CYP2B6P20813 491 aa13.59□□□□□ -0.23
PDLIM5-220ENST00000514830 PRPHP41219 470 aa13.59□□□□□ -0.23
PDLIM5-220ENST00000514830 UBXN2AP68543 259 aa13.59□□□□□ -0.23
PDLIM5-220ENST00000514830 ANO1Q5XXA6 986 aa13.59□□□□□ -0.23
PDLIM5-220ENST00000514830 ARL6IP4Q66PJ3 421 aaKnown RBP13.59□□□□□ -0.23
PDLIM5-220ENST00000514830 NLRX1Q86UT6 975 aa13.59□□□□□ -0.23
PDLIM5-220ENST00000514830 C4orf32Q8N8J7 132 aa13.59□□□□□ -0.23
PDLIM5-220ENST00000514830 FAM20AQ96MK3 541 aa13.59□□□□□ -0.23
PDLIM5-220ENST00000514830 MTMR9Q96QG7 549 aa13.59□□□□□ -0.23
PDLIM5-220ENST00000514830 KCNMB3Q9NPA1 279 aa13.59□□□□□ -0.23
PDLIM5-220ENST00000514830 FLRT1Q9NZU1 646 aa13.59□□□□□ -0.23
PDLIM5-220ENST00000514830 DDX25Q9UHL0 483 aaKnown RBP13.59□□□□□ -0.23
PDLIM5-220ENST00000514830 PCDHB6Q9Y5E3 794 aa13.59□□□□□ -0.23
PDLIM5-220ENST00000514830 SPATA31C2B4DYI2 1134 aa13.58□□□□□ -0.24
PDLIM5-220ENST00000514830 FIBPO43427 364 aa13.58□□□□□ -0.24
PDLIM5-220ENST00000514830 NEMFO60524 1076 aa13.58□□□□□ -0.24
PDLIM5-220ENST00000514830 MYCLP12524 364 aaPredicted RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms