RNA–Protein interactions for RNA: ENST00000514642.1

CCDC30-214, Transcript of coiled-coil domain containing 30, humanhuman

TSL 1 (best)

Gene CCDC30, Length 6,827 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-214ENST00000514642 GBP1P32455 592 aa8.2□□□□□ -1.1
CCDC30-214ENST00000514642 MFAP3P55082 362 aa8.2□□□□□ -1.1
CCDC30-214ENST00000514642 PPP1R18Q6NYC8 613 aa8.2□□□□□ -1.1
CCDC30-214ENST00000514642 TBC1D22BQ9NU19 505 aa8.2□□□□□ -1.1
CCDC30-214ENST00000514642 PCDHB4Q9Y5E5 795 aa8.2□□□□□ -1.1
CCDC30-214ENST00000514642 NR2E3Q9Y5X4 410 aa8.2□□□□□ -1.1
CCDC30-214ENST00000514642 PFASO15067 1338 aa8.19□□□□□ -1.1
CCDC30-214ENST00000514642 GH1P01241 217 aa8.19□□□□□ -1.1
CCDC30-214ENST00000514642 SLC9C1Q4G0N8 1177 aa8.19□□□□□ -1.1
CCDC30-214ENST00000514642 SFMBT2Q5VUG0 894 aa8.19□□□□□ -1.1
CCDC30-214ENST00000514642 RINT1Q6NUQ1 792 aa8.19□□□□□ -1.1
CCDC30-214ENST00000514642 CCDC26Q8TAB7 109 aa8.19□□□□□ -1.1
CCDC30-214ENST00000514642 LPAR1Q92633 364 aa8.19□□□□□ -1.1
CCDC30-214ENST00000514642 EDC3Q96F86 508 aaKnown RBP8.19□□□□□ -1.1
CCDC30-214ENST00000514642 USP42Q9H9J4 1324 aaKnown RBP8.19□□□□□ -1.1
CCDC30-214ENST00000514642 A0A1B0GVL5 298 aa8.19□□□□□ -1.1
CCDC30-214ENST00000514642 GTPBP6O43824 516 aaPredicted RBP8.19□□□□□ -1.1
CCDC30-214ENST00000514642 NOP9Q86U38 636 aaKnown RBP8.19□□□□□ -1.1
CCDC30-214ENST00000514642 NOSTRINQ8IVI9 506 aa8.19□□□□□ -1.1
CCDC30-214ENST00000514642 BEST2Q8NFU1 509 aa8.19□□□□□ -1.1
CCDC30-214ENST00000514642 TTC1Q99614 292 aa8.19□□□□□ -1.1
CCDC30-214ENST00000514642 LRRC4Q9HBW1 653 aa8.19□□□□□ -1.1
CCDC30-214ENST00000514642 TRMT1Q9NXH9 659 aaKnown RBP8.19□□□□□ -1.1
CCDC30-214ENST00000514642 KIAA1024Q9UPX6 916 aa8.19□□□□□ -1.1
CCDC30-214ENST00000514642 WDR46O15213 610 aaKnown RBP8.19□□□□□ -1.1
CCDC30-214ENST00000514642 SLC12A2P55011 1212 aa8.19□□□□□ -1.1
CCDC30-214ENST00000514642 MYL7Q01449 175 aa8.19□□□□□ -1.1
CCDC30-214ENST00000514642 MYL5Q02045 173 aa8.19□□□□□ -1.1
CCDC30-214ENST00000514642 CYP4A11Q02928 519 aa8.19□□□□□ -1.1
CCDC30-214ENST00000514642 SEPT2Q15019 361 aa8.19□□□□□ -1.1
CCDC30-214ENST00000514642 PAIP2Q9BPZ3 127 aaKnown RBP8.19□□□□□ -1.1
CCDC30-214ENST00000514642 FAM184BQ9ULE4 1060 aa8.19□□□□□ -1.1
CCDC30-214ENST00000514642 A0A0D9SFI3 127 aa8.19□□□□□ -1.1
CCDC30-214ENST00000514642 LDHAP00338 332 aaKnown RBP8.19□□□□□ -1.1
CCDC30-214ENST00000514642 CPA1P15085 419 aa8.19□□□□□ -1.1
CCDC30-214ENST00000514642 SFNP31947 248 aa8.19□□□□□ -1.1
CCDC30-214ENST00000514642 TRAPPC10P48553 1259 aa8.19□□□□□ -1.1
CCDC30-214ENST00000514642 ADALQ6DHV7 355 aa8.19□□□□□ -1.1
CCDC30-214ENST00000514642 CCDC89Q8N998 374 aa8.19□□□□□ -1.1
CCDC30-214ENST00000514642 MLKLQ8NB16 471 aa8.19□□□□□ -1.1
CCDC30-214ENST00000514642 MTRQ99707 1265 aa8.19□□□□□ -1.1
CCDC30-214ENST00000514642 VPS33BQ9H267 617 aa8.19□□□□□ -1.1
CCDC30-214ENST00000514642 CUEDC2Q9H467 287 aa8.19□□□□□ -1.1
CCDC30-214ENST00000514642 PIH1D3Q9NQM4 214 aaKnown RBP8.19□□□□□ -1.1
CCDC30-214ENST00000514642 PCDHB7Q9Y5E2 793 aa8.19□□□□□ -1.1
CCDC30-214ENST00000514642 CTAGE9A4FU28 777 aa8.19□□□□□ -1.1
CCDC30-214ENST00000514642 SYT1P21579 422 aa8.19□□□□□ -1.1
CCDC30-214ENST00000514642 NNMTP40261 264 aa8.19□□□□□ -1.1
CCDC30-214ENST00000514642 GNG11P61952 73 aa8.19□□□□□ -1.1
CCDC30-214ENST00000514642 GBP6Q6ZN66 633 aa8.19□□□□□ -1.1
CCDC30-214ENST00000514642 ZNF365Q70YC5 407 aa8.19□□□□□ -1.1
CCDC30-214ENST00000514642 AK8Q96MA6 479 aa8.19□□□□□ -1.1
CCDC30-214ENST00000514642 LSM14BQ9BX40 385 aaKnown RBP8.19□□□□□ -1.1
CCDC30-214ENST00000514642 RNF26Q9BY78 433 aaPredicted RBP8.19□□□□□ -1.1
CCDC30-214ENST00000514642 NSRP1Q9H0G5 558 aaKnown RBP8.19□□□□□ -1.1
CCDC30-214ENST00000514642 SH3GLB2Q9NR46 395 aa8.19□□□□□ -1.1
CCDC30-214ENST00000514642 POLR3EQ9NVU0 708 aa8.19□□□□□ -1.1
CCDC30-214ENST00000514642 SEPT10Q9P0V9 454 aa8.19□□□□□ -1.1
CCDC30-214ENST00000514642 ANAPC5Q9UJX4 755 aa8.19□□□□□ -1.1
CCDC30-214ENST00000514642 UBN2Q6ZU65 1347 aa8.18□□□□□ -1.1
CCDC30-214ENST00000514642 CCDC85CA6NKD9 419 aa8.18□□□□□ -1.1
CCDC30-214ENST00000514642 IGSF3O75054 1194 aa8.18□□□□□ -1.1
CCDC30-214ENST00000514642 HOXA13P31271 388 aaPredicted RBP8.18□□□□□ -1.1
CCDC30-214ENST00000514642 KRT76Q01546 638 aa8.18□□□□□ -1.1
CCDC30-214ENST00000514642 SPECC1LQ69YQ0 1117 aa8.18□□□□□ -1.1
CCDC30-214ENST00000514642 PFDN4Q9NQP4 134 aa8.18□□□□□ -1.1
CCDC30-214ENST00000514642 SYNJ2BP-COX16A0A087WUM0 186 aa8.18□□□□□ -1.1
CCDC30-214ENST00000514642 ADCY5O95622 1261 aa8.18□□□□□ -1.1
CCDC30-214ENST00000514642 S100BP04271 92 aaPredicted RBP8.18□□□□□ -1.1
CCDC30-214ENST00000514642 RASSF7Q02833 373 aa8.18□□□□□ -1.1
CCDC30-214ENST00000514642 KRT33BQ14525 404 aa8.18□□□□□ -1.1
CCDC30-214ENST00000514642 PPP2R5DQ14738 602 aa8.18□□□□□ -1.1
CCDC30-214ENST00000514642 NME8Q8N427 588 aa8.18□□□□□ -1.1
CCDC30-214ENST00000514642 DNAJC25Q9H1X3 360 aa8.18□□□□□ -1.1
CCDC30-214ENST00000514642 COX16Q9P0S2 106 aa8.18□□□□□ -1.1
CCDC30-214ENST00000514642 MYO1AQ9UBC5 1043 aa8.18□□□□□ -1.1
CCDC30-214ENST00000514642 DBNLQ9UJU6 430 aaKnown RBP8.18□□□□□ -1.1
CCDC30-214ENST00000514642 FARP1Q9Y4F1 1045 aaPredicted RBP8.18□□□□□ -1.1
CCDC30-214ENST00000514642 NEXMIFQ5QGS0 1516 aa8.18□□□□□ -1.1
CCDC30-214ENST00000514642 PREX1Q8TCU6 1659 aa8.18□□□□□ -1.1
CCDC30-214ENST00000514642 CTNND1O60716 968 aaKnown RBP8.18□□□□□ -1.1
CCDC30-214ENST00000514642 CAMTA2O94983 1202 aa8.18□□□□□ -1.1
CCDC30-214ENST00000514642 RECQLP46063 649 aaPredicted RBP8.18□□□□□ -1.1
CCDC30-214ENST00000514642 USP50Q70EL3 339 aaPredicted RBP8.18□□□□□ -1.1
CCDC30-214ENST00000514642 ISCA1Q9BUE6 129 aa8.18□□□□□ -1.1
CCDC30-214ENST00000514642 TM6SF1Q9BZW5 370 aa8.18□□□□□ -1.1
CCDC30-214ENST00000514642 AKR1B15C9JRZ8 316 aaPredicted RBP8.18□□□□□ -1.1
CCDC30-214ENST00000514642 ZBTB5O15062 677 aa8.18□□□□□ -1.1
CCDC30-214ENST00000514642 PRKAB2O43741 272 aa8.18□□□□□ -1.1
CCDC30-214ENST00000514642 C6orf222P0C671 652 aaPredicted RBP8.18□□□□□ -1.1
CCDC30-214ENST00000514642 ARHGAP4P98171 946 aa8.18□□□□□ -1.1
CCDC30-214ENST00000514642 TFAMQ00059 246 aaKnown RBP8.18□□□□□ -1.1
CCDC30-214ENST00000514642 KRT17Q04695 432 aa8.18□□□□□ -1.1
CCDC30-214ENST00000514642 PALM2Q8IXS6 379 aa8.18□□□□□ -1.1
CCDC30-214ENST00000514642 OTUD7AQ8TE49 926 aaPredicted RBP8.18□□□□□ -1.1
CCDC30-214ENST00000514642 SLC38A10Q9HBR0 1119 aa8.18□□□□□ -1.1
CCDC30-214ENST00000514642 PCDHA6Q9UN73 950 aa8.18□□□□□ -1.1
CCDC30-214ENST00000514642 PCDHA8Q9Y5H6 950 aa8.18□□□□□ -1.1
CCDC30-214ENST00000514642 GCLCP48506 637 aaPredicted RBP8.18□□□□□ -1.1
CCDC30-214ENST00000514642 HHIPL2Q6UWX4 724 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms