RNA–Protein interactions for RNA: ENST00000514439.1

CPNE4-211, Transcript of copine 4, humanhuman

TSL 1 (best)

Gene CPNE4, Length 2,312 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-211ENST00000514439 AMNQ9BXJ7 453 aa9.15□□□□□ -0.94
CPNE4-211ENST00000514439 SEMA6BQ9H3T3 888 aa9.15□□□□□ -0.94
CPNE4-211ENST00000514439 LZTFL1Q9NQ48 299 aa9.15□□□□□ -0.94
CPNE4-211ENST00000514439 A0A1W2PRG0 241 aa9.15□□□□□ -0.95
CPNE4-211ENST00000514439 CLRN2A0PK11 232 aa9.15□□□□□ -0.95
CPNE4-211ENST00000514439 TCP10L2B9ZVM9 353 aa9.15□□□□□ -0.95
CPNE4-211ENST00000514439 BMP3P12645 472 aa9.15□□□□□ -0.95
CPNE4-211ENST00000514439 IDEP14735 1019 aa9.15□□□□□ -0.95
CPNE4-211ENST00000514439 TAL1P17542 331 aaPredicted RBP9.15□□□□□ -0.95
CPNE4-211ENST00000514439 DNM2P50570 870 aa9.15□□□□□ -0.95
CPNE4-211ENST00000514439 USH1GQ495M9 461 aa9.15□□□□□ -0.95
CPNE4-211ENST00000514439 HYIQ5T013 277 aa9.15□□□□□ -0.95
CPNE4-211ENST00000514439 CENPPQ6IPU0 288 aa9.15□□□□□ -0.95
CPNE4-211ENST00000514439 RSBN1LQ6PCB5 846 aaPredicted RBP9.15□□□□□ -0.95
CPNE4-211ENST00000514439 FBXO11Q86XK2 927 aa9.15□□□□□ -0.95
CPNE4-211ENST00000514439 ACRBPQ8NEB7 543 aa9.15□□□□□ -0.95
CPNE4-211ENST00000514439 MBOAT7Q96N66 472 aa9.15□□□□□ -0.95
CPNE4-211ENST00000514439 IRX2Q9BZI1 471 aaPredicted RBP9.15□□□□□ -0.95
CPNE4-211ENST00000514439 LRRC27Q9C0I9 530 aa9.15□□□□□ -0.95
CPNE4-211ENST00000514439 PDGFDQ9GZP0 370 aaPredicted RBP9.15□□□□□ -0.95
CPNE4-211ENST00000514439 TMOD2Q9NZR1 351 aa9.15□□□□□ -0.95
CPNE4-211ENST00000514439 KDM3AQ9Y4C1 1321 aa9.14□□□□□ -0.95
CPNE4-211ENST00000514439 CYP3A7-CYP3A51PA0A087WV96 503 aa9.14□□□□□ -0.95
CPNE4-211ENST00000514439 NKRFO15226 690 aaKnown RBP eCLIP9.14□□□□□ -0.95
CPNE4-211ENST00000514439 RAD17O75943 681 aa9.14□□□□□ -0.95
CPNE4-211ENST00000514439 CYP3A7P24462 503 aa9.14□□□□□ -0.95
CPNE4-211ENST00000514439 MTIF2P46199 727 aaKnown RBP9.14□□□□□ -0.95
CPNE4-211ENST00000514439 ARHGAP4P98171 946 aa9.14□□□□□ -0.95
CPNE4-211ENST00000514439 EHHADHQ08426 723 aa9.14□□□□□ -0.95
CPNE4-211ENST00000514439 ERCC6LQ2NKX8 1250 aa9.14□□□□□ -0.95
CPNE4-211ENST00000514439 MIIPQ5JXC2 388 aa9.14□□□□□ -0.95
CPNE4-211ENST00000514439 SPICE1Q8N0Z3 855 aa9.14□□□□□ -0.95
CPNE4-211ENST00000514439 GUF1Q8N442 669 aaKnown RBP9.14□□□□□ -0.95
CPNE4-211ENST00000514439 CRYGNQ8WXF5 182 aa9.14□□□□□ -0.95
CPNE4-211ENST00000514439 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.14□□□□□ -0.95
CPNE4-211ENST00000514439 HERC5Q9UII4 1024 aaKnown RBP9.14□□□□□ -0.95
CPNE4-211ENST00000514439 LUC7L2Q9Y383 392 aaKnown RBP9.14□□□□□ -0.95
CPNE4-211ENST00000514439 ARFGEF1Q9Y6D6 1849 aa9.14□□□□□ -0.95
CPNE4-211ENST00000514439 PSMD14O00487 310 aa9.14□□□□□ -0.95
CPNE4-211ENST00000514439 TBC1D8BQ0IIM8 1120 aa9.14□□□□□ -0.95
CPNE4-211ENST00000514439 MOXD1Q6UVY6 613 aa9.14□□□□□ -0.95
CPNE4-211ENST00000514439 BTNL9Q6UXG8 535 aa9.14□□□□□ -0.95
CPNE4-211ENST00000514439 TTLL6Q8N841 843 aa9.14□□□□□ -0.95
CPNE4-211ENST00000514439 ZNF397Q8NF99 534 aaPredicted RBP9.14□□□□□ -0.95
CPNE4-211ENST00000514439 OR8K1Q8NGG5 319 aa9.14□□□□□ -0.95
CPNE4-211ENST00000514439 DNAJC19Q96DA6 116 aa9.14□□□□□ -0.95
CPNE4-211ENST00000514439 DNAJC7Q99615 494 aa9.14□□□□□ -0.95
CPNE4-211ENST00000514439 NOC4LQ9BVI4 516 aaKnown RBP9.14□□□□□ -0.95
CPNE4-211ENST00000514439 TTYH3Q9C0H2 523 aa9.14□□□□□ -0.95
CPNE4-211ENST00000514439 NT5C3AQ9H0P0 336 aa9.14□□□□□ -0.95
CPNE4-211ENST00000514439 CAPN11Q9UMQ6 739 aa9.14□□□□□ -0.95
CPNE4-211ENST00000514439 POTEB3A0JP26 581 aa9.13□□□□□ -0.95
CPNE4-211ENST00000514439 POTECB2RU33 542 aa9.13□□□□□ -0.95
CPNE4-211ENST00000514439 E9PMD0 336 aa9.13□□□□□ -0.95
CPNE4-211ENST00000514439 KIF5CO60282 957 aa9.13□□□□□ -0.95
CPNE4-211ENST00000514439 TADA3O75528 432 aa9.13□□□□□ -0.95
CPNE4-211ENST00000514439 SSBP05455 408 aaKnown RBP eCLIP9.13□□□□□ -0.95
CPNE4-211ENST00000514439 STAT3P40763 770 aa9.13□□□□□ -0.95
CPNE4-211ENST00000514439 ECE1P42892 770 aa9.13□□□□□ -0.95
CPNE4-211ENST00000514439 KLK7P49862 253 aa9.13□□□□□ -0.95
CPNE4-211ENST00000514439 MMP14P50281 582 aa9.13□□□□□ -0.95
CPNE4-211ENST00000514439 MAP3K9P80192 1104 aa9.13□□□□□ -0.95
CPNE4-211ENST00000514439 COASYQ13057 564 aa9.13□□□□□ -0.95
CPNE4-211ENST00000514439 PSMD2Q13200 908 aa9.13□□□□□ -0.95
CPNE4-211ENST00000514439 ARHGAP29Q52LW3 1261 aa9.13□□□□□ -0.95
CPNE4-211ENST00000514439 PRR16Q569H4 304 aa9.13□□□□□ -0.95
CPNE4-211ENST00000514439 MCTP2Q6DN12 878 aa9.13□□□□□ -0.95
CPNE4-211ENST00000514439 FBXO38Q6PIJ6 1188 aa9.13□□□□□ -0.95
CPNE4-211ENST00000514439 POTEBQ6S5H4 581 aa9.13□□□□□ -0.95
CPNE4-211ENST00000514439 SLFN12Q8IYM2 578 aa9.13□□□□□ -0.95
CPNE4-211ENST00000514439 RTKN2Q8IZC4 609 aa9.13□□□□□ -0.95
CPNE4-211ENST00000514439 LARGE2Q8N3Y3 721 aa9.13□□□□□ -0.95
CPNE4-211ENST00000514439 GLIS3Q8NEA6 775 aa9.13□□□□□ -0.95
CPNE4-211ENST00000514439 MNS1Q8NEH6 495 aa9.13□□□□□ -0.95
CPNE4-211ENST00000514439 ETNPPLQ8TBG4 499 aa9.13□□□□□ -0.95
CPNE4-211ENST00000514439 GMLQ99445 158 aa9.13□□□□□ -0.95
CPNE4-211ENST00000514439 PSMD1Q99460 953 aa9.13□□□□□ -0.95
CPNE4-211ENST00000514439 CHP1Q99653 195 aa9.13□□□□□ -0.95
CPNE4-211ENST00000514439 CARD6Q9BX69 1037 aa9.13□□□□□ -0.95
CPNE4-211ENST00000514439 ZNF70Q9UC06 446 aaPredicted RBP9.13□□□□□ -0.95
CPNE4-211ENST00000514439 KIAA1024Q9UPX6 916 aa9.13□□□□□ -0.95
CPNE4-211ENST00000514439 MRFAP1Q9Y605 127 aa9.13□□□□□ -0.95
CPNE4-211ENST00000514439 COL4A5P29400 1685 aa9.13□□□□□ -0.95
CPNE4-211ENST00000514439 RASSF10A6NK89 507 aa9.13□□□□□ -0.95
CPNE4-211ENST00000514439 SPDYE3A6NKU9 549 aa9.13□□□□□ -0.95
CPNE4-211ENST00000514439 OPLAHO14841 1288 aa9.13□□□□□ -0.95
CPNE4-211ENST00000514439 VIL1P09327 827 aaKnown RBP9.13□□□□□ -0.95
CPNE4-211ENST00000514439 TRIM21P19474 475 aaKnown RBP9.13□□□□□ -0.95
CPNE4-211ENST00000514439 HOXA7P31268 230 aaPredicted RBP9.13□□□□□ -0.95
CPNE4-211ENST00000514439 SREBF1P36956 1147 aa9.13□□□□□ -0.95
CPNE4-211ENST00000514439 LRRC63Q05C16 580 aa9.13□□□□□ -0.95
CPNE4-211ENST00000514439 SPIRE1Q08AE8 756 aa9.13□□□□□ -0.95
CPNE4-211ENST00000514439 LRRC41Q15345 812 aa9.13□□□□□ -0.95
CPNE4-211ENST00000514439 DLGAP5Q15398 846 aa9.13□□□□□ -0.95
CPNE4-211ENST00000514439 GRIPAP1Q4V328 841 aa9.13□□□□□ -0.95
CPNE4-211ENST00000514439 WDR59Q6PJI9 974 aa9.13□□□□□ -0.95
CPNE4-211ENST00000514439 FAM151AQ8WW52 585 aa9.13□□□□□ -0.95
CPNE4-211ENST00000514439 LENG9Q96B70 501 aa9.13□□□□□ -0.95
CPNE4-211ENST00000514439 SLF1Q9BQI6 1058 aa9.13□□□□□ -0.95
CPNE4-211ENST00000514439 ZNF277Q9NRM2 450 aaPredicted RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms