RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 SIRT2Q8IXJ6 389 aa12.41□□□□□ -0.42
CLDND1-227ENST00000513452 SP7Q8TDD2 431 aaPredicted RBP12.41□□□□□ -0.42
CLDND1-227ENST00000513452 KAT2BQ92831 832 aa12.41□□□□□ -0.42
CLDND1-227ENST00000513452 MPHOSPH6Q99547 160 aaKnown RBP12.41□□□□□ -0.42
CLDND1-227ENST00000513452 NSUN3Q9H649 340 aaKnown RBP12.41□□□□□ -0.42
CLDND1-227ENST00000513452 H3BNC9 293 aa12.4□□□□□ -0.42
CLDND1-227ENST00000513452 RNF113AO15541 343 aaKnown RBP12.4□□□□□ -0.42
CLDND1-227ENST00000513452 SLC3A2P08195 630 aaKnown RBP12.4□□□□□ -0.42
CLDND1-227ENST00000513452 RPS6P62753 249 aaKnown RBP12.4□□□□□ -0.42
CLDND1-227ENST00000513452 PPARAQ07869 468 aa12.4□□□□□ -0.42
CLDND1-227ENST00000513452 GPM6BQ13491 265 aa12.4□□□□□ -0.42
CLDND1-227ENST00000513452 COL19A1Q14993 1142 aa12.4□□□□□ -0.42
CLDND1-227ENST00000513452 HERC4Q5GLZ8 1057 aaPredicted RBP12.4□□□□□ -0.42
CLDND1-227ENST00000513452 PPP4R3BQ5MIZ7 849 aa12.4□□□□□ -0.42
CLDND1-227ENST00000513452 ZNF618Q5T7W0 954 aa12.4□□□□□ -0.42
CLDND1-227ENST00000513452 SYDE2Q5VT97 1194 aa12.4□□□□□ -0.42
CLDND1-227ENST00000513452 TRAF7Q6Q0C0 670 aa12.4□□□□□ -0.42
CLDND1-227ENST00000513452 CHST3Q7LGC8 479 aa12.4□□□□□ -0.42
CLDND1-227ENST00000513452 IFNL3Q8IZI9 196 aa12.4□□□□□ -0.42
CLDND1-227ENST00000513452 C7orf31Q8N865 590 aa12.4□□□□□ -0.42
CLDND1-227ENST00000513452 KBTBD3Q8NAB2 608 aa12.4□□□□□ -0.42
CLDND1-227ENST00000513452 CLEC4DQ8WXI8 215 aa12.4□□□□□ -0.42
CLDND1-227ENST00000513452 WNT8BQ93098 351 aa12.4□□□□□ -0.42
CLDND1-227ENST00000513452 SAMD11Q96NU1 681 aa12.4□□□□□ -0.42
CLDND1-227ENST00000513452 POP1Q99575 1024 aaKnown RBP12.4□□□□□ -0.42
CLDND1-227ENST00000513452 ALG1Q9BT22 464 aa12.4□□□□□ -0.42
CLDND1-227ENST00000513452 HDAC6Q9UBN7 1215 aa12.4□□□□□ -0.42
CLDND1-227ENST00000513452 GTF2IRD1Q9UHL9 959 aa12.4□□□□□ -0.42
CLDND1-227ENST00000513452 TSPY2A6NKD2 308 aa12.39□□□□□ -0.43
CLDND1-227ENST00000513452 LGR5O75473 907 aa12.39□□□□□ -0.43
CLDND1-227ENST00000513452 GH1P01241 217 aa12.39□□□□□ -0.43
CLDND1-227ENST00000513452 HTRA4P83105 476 aaPredicted RBP12.39□□□□□ -0.43
CLDND1-227ENST00000513452 ARHGAP1Q07960 439 aa12.39□□□□□ -0.43
CLDND1-227ENST00000513452 PTK7Q13308 1070 aa12.39□□□□□ -0.43
CLDND1-227ENST00000513452 SMAD2Q15796 467 aaKnown RBP12.39□□□□□ -0.43
CLDND1-227ENST00000513452 LY6KQ17RY6 165 aa12.39□□□□□ -0.43
CLDND1-227ENST00000513452 TRIM71Q2Q1W2 868 aaKnown RBP12.39□□□□□ -0.43
CLDND1-227ENST00000513452 IER5LQ5T953 404 aa12.39□□□□□ -0.43
CLDND1-227ENST00000513452 FBXO11Q86XK2 927 aa12.39□□□□□ -0.43
CLDND1-227ENST00000513452 RNF135Q8IUD6 432 aa12.39□□□□□ -0.43
CLDND1-227ENST00000513452 DNERQ8NFT8 737 aa12.39□□□□□ -0.43
CLDND1-227ENST00000513452 DCAF4Q8WV16 495 aa12.39□□□□□ -0.43
CLDND1-227ENST00000513452 YME1L1Q96TA2 773 aa12.39□□□□□ -0.43
CLDND1-227ENST00000513452 NACAP1Q9BZK3 213 aa12.39□□□□□ -0.43
CLDND1-227ENST00000513452 IL17RBQ9NRM6 502 aa12.39□□□□□ -0.43
CLDND1-227ENST00000513452 FRMPD2Q68DX3 1309 aaPredicted RBP12.38□□□□□ -0.43
CLDND1-227ENST00000513452 TECTAO75443 2155 aa12.38□□□□□ -0.43
CLDND1-227ENST00000513452 PATL2C9JE40 543 aaKnown RBP12.38□□□□□ -0.43
CLDND1-227ENST00000513452 GFRA3O60609 400 aa12.38□□□□□ -0.43
CLDND1-227ENST00000513452 ZNF286BP0CG31 522 aa12.38□□□□□ -0.43
CLDND1-227ENST00000513452 CASTP20810 708 aaKnown RBP12.38□□□□□ -0.43
CLDND1-227ENST00000513452 LTBRP36941 435 aa12.38□□□□□ -0.43
CLDND1-227ENST00000513452 PSEN2P49810 448 aa12.38□□□□□ -0.43
CLDND1-227ENST00000513452 MKRN4PQ13434 485 aaPredicted RBP12.38□□□□□ -0.43
CLDND1-227ENST00000513452 CCDC62Q6P9F0 684 aa12.38□□□□□ -0.43
CLDND1-227ENST00000513452 SEPT14Q6ZU15 432 aa12.38□□□□□ -0.43
CLDND1-227ENST00000513452 TMEM192Q8IY95 271 aa12.38□□□□□ -0.43
CLDND1-227ENST00000513452 DBF4BQ8NFT6 615 aa12.38□□□□□ -0.43
CLDND1-227ENST00000513452 NAPBQ9H115 298 aa12.38□□□□□ -0.43
CLDND1-227ENST00000513452 GPCPD1Q9NPB8 672 aa12.38□□□□□ -0.43
CLDND1-227ENST00000513452 FAM86C1Q9NVL1 165 aa12.38□□□□□ -0.43
CLDND1-227ENST00000513452 EMSYQ7Z589 1322 aa12.37□□□□□ -0.43
CLDND1-227ENST00000513452 ZDBF2Q9HCK1 2354 aa12.37□□□□□ -0.43
CLDND1-227ENST00000513452 TMEM221A6NGB7 291 aa12.37□□□□□ -0.43
CLDND1-227ENST00000513452 B4DLN1 442 aa12.37□□□□□ -0.43
CLDND1-227ENST00000513452 M0R296 226 aa12.37□□□□□ -0.43
CLDND1-227ENST00000513452 MBTPS2O43462 519 aa12.37□□□□□ -0.43
CLDND1-227ENST00000513452 SMARCA5O60264 1052 aaPredicted RBP12.37□□□□□ -0.43
CLDND1-227ENST00000513452 ZFYP08048 801 aaPredicted RBP12.37□□□□□ -0.43
CLDND1-227ENST00000513452 MRPL12P52815 198 aaKnown RBP12.37□□□□□ -0.43
CLDND1-227ENST00000513452 ZNF200P98182 395 aaPredicted RBP12.37□□□□□ -0.43
CLDND1-227ENST00000513452 DLX2Q07687 328 aaPredicted RBP12.37□□□□□ -0.43
CLDND1-227ENST00000513452 TCF15Q12870 199 aa12.37□□□□□ -0.43
CLDND1-227ENST00000513452 MFSD10Q14728 455 aa12.37□□□□□ -0.43
CLDND1-227ENST00000513452 DGKDQ16760 1214 aa12.37□□□□□ -0.43
CLDND1-227ENST00000513452 TSHZ3Q63HK5 1081 aa12.37□□□□□ -0.43
CLDND1-227ENST00000513452 BTNL9Q6UXG8 535 aa12.37□□□□□ -0.43
CLDND1-227ENST00000513452 SUGP1Q8IWZ8 645 aaKnown RBP12.37□□□□□ -0.43
CLDND1-227ENST00000513452 EDAQ92838 391 aa12.37□□□□□ -0.43
CLDND1-227ENST00000513452 PBXIP1Q96AQ6 731 aa12.37□□□□□ -0.43
CLDND1-227ENST00000513452 KATNAL1Q9BW62 490 aa12.37□□□□□ -0.43
CLDND1-227ENST00000513452 LRRCC1Q9C099 1032 aa12.37□□□□□ -0.43
CLDND1-227ENST00000513452 INCENPQ9NQS7 918 aa12.37□□□□□ -0.43
CLDND1-227ENST00000513452 ECHDC1Q9NTX5 307 aa12.37□□□□□ -0.43
CLDND1-227ENST00000513452 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.37□□□□□ -0.43
CLDND1-227ENST00000513452 MICAL3Q7RTP6 2002 aa12.37□□□□□ -0.43
CLDND1-227ENST00000513452 USP34Q70CQ2 3546 aa12.36□□□□□ -0.43
CLDND1-227ENST00000513452 COL4A6Q14031 1691 aa12.36□□□□□ -0.43
CLDND1-227ENST00000513452 CACNA1AO00555 2505 aa12.36□□□□□ -0.43
CLDND1-227ENST00000513452 STXBP3O00186 592 aa12.36□□□□□ -0.43
CLDND1-227ENST00000513452 NCK2O43639 380 aa12.36□□□□□ -0.43
CLDND1-227ENST00000513452 RANBP6O60518 1105 aaKnown RBP12.36□□□□□ -0.43
CLDND1-227ENST00000513452 TBX10O75333 385 aa12.36□□□□□ -0.43
CLDND1-227ENST00000513452 UPP2O95045 317 aa12.36□□□□□ -0.43
CLDND1-227ENST00000513452 CSPG5O95196 566 aa12.36□□□□□ -0.43
CLDND1-227ENST00000513452 CTDSPL2Q05D32 466 aa12.36□□□□□ -0.43
CLDND1-227ENST00000513452 SMAD4Q13485 552 aaKnown RBP12.36□□□□□ -0.43
CLDND1-227ENST00000513452 KIAA0753Q2KHM9 967 aa12.36□□□□□ -0.43
CLDND1-227ENST00000513452 TRIM67Q6ZTA4 783 aa12.36□□□□□ -0.43
CLDND1-227ENST00000513452 BMP8AQ7Z5Y6 402 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 473.2 ms