RNA–Protein interactions for RNA: ENST00000512853.5

SNX25-205, Transcript of sorting nexin 25, humanhuman

TSL 1 (best)

Gene SNX25, Length 1,937 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-205ENST00000512853 HSF2BPO75031 334 aa12.81□□□□□ -0.36
SNX25-205ENST00000512853 RASA1P20936 1047 aa12.81□□□□□ -0.36
SNX25-205ENST00000512853 RPS8P62241 208 aaKnown RBP12.81□□□□□ -0.36
SNX25-205ENST00000512853 TTMPQ5BVD1 217 aa12.81□□□□□ -0.36
SNX25-205ENST00000512853 KLHDC7AQ5VTJ3 777 aa12.81□□□□□ -0.36
SNX25-205ENST00000512853 ICE2Q659A1 982 aa12.81□□□□□ -0.36
SNX25-205ENST00000512853 HGSNATQ68CP4 663 aa12.81□□□□□ -0.36
SNX25-205ENST00000512853 C8orf74Q6P047 294 aa12.81□□□□□ -0.36
SNX25-205ENST00000512853 RRAGAQ7L523 313 aa12.81□□□□□ -0.36
SNX25-205ENST00000512853 MREGQ8N565 214 aa12.81□□□□□ -0.36
SNX25-205ENST00000512853 SYN2Q92777 582 aaPredicted RBP12.81□□□□□ -0.36
SNX25-205ENST00000512853 NOX5Q96PH1 765 aa12.81□□□□□ -0.36
SNX25-205ENST00000512853 MTMR9Q96QG7 549 aa12.81□□□□□ -0.36
SNX25-205ENST00000512853 MMRN2Q9H8L6 949 aa12.81□□□□□ -0.36
SNX25-205ENST00000512853 MKNK2Q9HBH9 465 aa12.81□□□□□ -0.36
SNX25-205ENST00000512853 GDF3Q9NR23 364 aa12.81□□□□□ -0.36
SNX25-205ENST00000512853 SALL4Q9UJQ4 1053 aa12.81□□□□□ -0.36
SNX25-205ENST00000512853 KIF13BQ9NQT8 1826 aa12.8□□□□□ -0.36
SNX25-205ENST00000512853 SMCO2A6NFE2 343 aa12.8□□□□□ -0.36
SNX25-205ENST00000512853 NCK2O43639 380 aa12.8□□□□□ -0.36
SNX25-205ENST00000512853 TECP42680 631 aa12.8□□□□□ -0.36
SNX25-205ENST00000512853 CCT5P48643 541 aa12.8□□□□□ -0.36
SNX25-205ENST00000512853 PPP4CP60510 307 aa12.8□□□□□ -0.36
SNX25-205ENST00000512853 GNGT1P63211 74 aa12.8□□□□□ -0.36
SNX25-205ENST00000512853 TMEM119Q4V9L6 283 aa12.8□□□□□ -0.36
SNX25-205ENST00000512853 POTEDQ86YR6 584 aa12.8□□□□□ -0.36
SNX25-205ENST00000512853 PROM2Q8N271 834 aa12.8□□□□□ -0.36
SNX25-205ENST00000512853 SH3RF3Q8TEJ3 882 aaPredicted RBP12.8□□□□□ -0.36
SNX25-205ENST00000512853 MTMR8Q96EF0 704 aa12.8□□□□□ -0.36
SNX25-205ENST00000512853 RBM12Q9NTZ6 932 aaKnown RBP12.8□□□□□ -0.36
SNX25-205ENST00000512853 SMARCAL1Q9NZC9 954 aa12.8□□□□□ -0.36
SNX25-205ENST00000512853 SHTN1A0MZ66 631 aa12.8□□□□□ -0.36
SNX25-205ENST00000512853 hCG_1984214I3L0E3 225 aa12.8□□□□□ -0.36
SNX25-205ENST00000512853 EBAG9O00559 213 aa12.8□□□□□ -0.36
SNX25-205ENST00000512853 SLC1A4P43007 532 aa12.8□□□□□ -0.36
SNX25-205ENST00000512853 SLC7A5Q01650 507 aa12.8□□□□□ -0.36
SNX25-205ENST00000512853 PSMD2Q13200 908 aa12.8□□□□□ -0.36
SNX25-205ENST00000512853 SLC4A8Q2Y0W8 1093 aa12.8□□□□□ -0.36
SNX25-205ENST00000512853 ZNF444Q8N0Y2 327 aaPredicted RBP12.8□□□□□ -0.36
SNX25-205ENST00000512853 ZNF713Q8N859 430 aaPredicted RBP12.8□□□□□ -0.36
SNX25-205ENST00000512853 TBCKQ8TEA7 893 aa12.8□□□□□ -0.36
SNX25-205ENST00000512853 LARP4BQ92615 738 aaKnown RBP12.8□□□□□ -0.36
SNX25-205ENST00000512853 RAD54LQ92698 747 aa12.8□□□□□ -0.36
SNX25-205ENST00000512853 ARL8AQ96BM9 186 aa12.8□□□□□ -0.36
SNX25-205ENST00000512853 NUCKS1Q9H1E3 243 aaKnown RBP12.8□□□□□ -0.36
SNX25-205ENST00000512853 RIC8AQ9NPQ8 531 aa12.8□□□□□ -0.36
SNX25-205ENST00000512853 EHD2Q9NZN4 543 aa12.8□□□□□ -0.36
SNX25-205ENST00000512853 CEP72Q9P209 647 aa12.8□□□□□ -0.36
SNX25-205ENST00000512853 ZNF335Q9H4Z2 1342 aaPredicted RBP12.79□□□□□ -0.36
SNX25-205ENST00000512853 GRID2IPA4D2P6 1211 aa12.79□□□□□ -0.36
SNX25-205ENST00000512853 ANKRD65E5RJM6 399 aa12.79□□□□□ -0.36
SNX25-205ENST00000512853 GSTO1P78417 241 aa12.79□□□□□ -0.36
SNX25-205ENST00000512853 PAK2Q13177 524 aa12.79□□□□□ -0.36
SNX25-205ENST00000512853 CFAP221Q4G0U5 840 aa12.79□□□□□ -0.36
SNX25-205ENST00000512853 ZCWPW2Q504Y3 356 aa12.79□□□□□ -0.36
SNX25-205ENST00000512853 SOGA3Q5TF21 947 aa12.79□□□□□ -0.36
SNX25-205ENST00000512853 EMC10Q5UCC4 262 aa12.79□□□□□ -0.36
SNX25-205ENST00000512853 SUGP1Q8IWZ8 645 aaKnown RBP12.79□□□□□ -0.36
SNX25-205ENST00000512853 CD302Q8IX05 232 aa12.79□□□□□ -0.36
SNX25-205ENST00000512853 IFT20Q8IY31 132 aa12.79□□□□□ -0.36
SNX25-205ENST00000512853 SLC44A5Q8NCS7 719 aa12.79□□□□□ -0.36
SNX25-205ENST00000512853 C1orf131Q8NDD1 294 aaKnown RBP12.79□□□□□ -0.36
SNX25-205ENST00000512853 ACSBG1Q96GR2 724 aa12.79□□□□□ -0.36
SNX25-205ENST00000512853 RUFY1Q96T51 708 aa12.79□□□□□ -0.36
SNX25-205ENST00000512853 TSG101Q99816 390 aa12.79□□□□□ -0.36
SNX25-205ENST00000512853 LRRC27Q9C0I9 530 aa12.79□□□□□ -0.36
SNX25-205ENST00000512853 EHD4Q9H223 541 aa12.79□□□□□ -0.36
SNX25-205ENST00000512853 FAM169AQ9Y6X4 670 aa12.79□□□□□ -0.36
SNX25-205ENST00000512853 ZEB2O60315 1214 aa12.78□□□□□ -0.36
SNX25-205ENST00000512853 GOLGA8HP0CJ92 632 aa12.78□□□□□ -0.36
SNX25-205ENST00000512853 CXCR5P32302 372 aa12.78□□□□□ -0.36
SNX25-205ENST00000512853 MATR3P43243 847 aaKnown RBP eCLIP12.78□□□□□ -0.36
SNX25-205ENST00000512853 GFPT1Q06210 699 aaPredicted RBP12.78□□□□□ -0.36
SNX25-205ENST00000512853 KCNMA1Q12791 1236 aa12.78□□□□□ -0.36
SNX25-205ENST00000512853 DDB1Q16531 1140 aa12.78□□□□□ -0.36
SNX25-205ENST00000512853 CALCRLQ16602 461 aa12.78□□□□□ -0.36
SNX25-205ENST00000512853 REXO1Q8N1G1 1221 aaKnown RBP12.78□□□□□ -0.36
SNX25-205ENST00000512853 NEDD1Q8NHV4 660 aa12.78□□□□□ -0.36
SNX25-205ENST00000512853 WDR66Q8TBY9 1149 aa12.78□□□□□ -0.36
SNX25-205ENST00000512853 BCAS4Q8TDM0 211 aa12.78□□□□□ -0.36
SNX25-205ENST00000512853 ZIM3Q96PE6 472 aa12.78□□□□□ -0.36
SNX25-205ENST00000512853 MYH7BA7E2Y1 1941 aa12.78□□□□□ -0.36
SNX25-205ENST00000512853 SERPING1P05155 500 aa12.78□□□□□ -0.36
SNX25-205ENST00000512853 LDHBP07195 334 aaKnown RBP12.78□□□□□ -0.36
SNX25-205ENST00000512853 NOVP48745 357 aa12.78□□□□□ -0.36
SNX25-205ENST00000512853 RASSF7Q02833 373 aa12.78□□□□□ -0.36
SNX25-205ENST00000512853 TMEM266Q2M3C6 531 aa12.78□□□□□ -0.36
SNX25-205ENST00000512853 KDM7AQ6ZMT4 941 aa12.78□□□□□ -0.36
SNX25-205ENST00000512853 C16orf86Q6ZW13 317 aa12.78□□□□□ -0.36
SNX25-205ENST00000512853 TXNRD3Q86VQ6 643 aa12.78□□□□□ -0.36
SNX25-205ENST00000512853 IQCKQ8N0W5 287 aa12.78□□□□□ -0.36
SNX25-205ENST00000512853 MARCH10Q8NA82 808 aaPredicted RBP12.78□□□□□ -0.36
SNX25-205ENST00000512853 INPP4AQ96PE3 977 aaPredicted RBP12.78□□□□□ -0.36
SNX25-205ENST00000512853 PAGR1Q9BTK6 254 aa12.78□□□□□ -0.36
SNX25-205ENST00000512853 NYXQ9GZU5 481 aa12.78□□□□□ -0.36
SNX25-205ENST00000512853 ZNF287Q9HBT7 754 aa12.78□□□□□ -0.36
SNX25-205ENST00000512853 LUC7LQ9NQ29 371 aaKnown RBP12.78□□□□□ -0.36
SNX25-205ENST00000512853 SEC63Q9UGP8 760 aaKnown RBP12.78□□□□□ -0.36
SNX25-205ENST00000512853 STX8Q9UNK0 236 aa12.78□□□□□ -0.36
SNX25-205ENST00000512853 THRAP3Q9Y2W1 955 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms