RNA–Protein interactions for RNA: ENST00000512242.5

COPB2-209, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 5

Gene COPB2, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-209ENST00000512242 A6NJR5 290 aa12.68□□□□□ -0.38
COPB2-209ENST00000512242 CYTH3O43739 400 aa12.68□□□□□ -0.38
COPB2-209ENST00000512242 EIF3JO75822 258 aaKnown RBP12.68□□□□□ -0.38
COPB2-209ENST00000512242 GH1P01241 217 aa12.68□□□□□ -0.38
COPB2-209ENST00000512242 FGBP02675 491 aa12.68□□□□□ -0.38
COPB2-209ENST00000512242 SUPT20HL2P0C7V6 817 aa12.68□□□□□ -0.38
COPB2-209ENST00000512242 TROAPQ12815 778 aa12.68□□□□□ -0.38
COPB2-209ENST00000512242 CCDC62Q6P9F0 684 aa12.68□□□□□ -0.38
COPB2-209ENST00000512242 CASC1Q6TDU7 716 aa12.68□□□□□ -0.38
COPB2-209ENST00000512242 OTOP2Q7RTS6 562 aa12.68□□□□□ -0.38
COPB2-209ENST00000512242 MB21D2Q8IYB1 491 aaPredicted RBP12.68□□□□□ -0.38
COPB2-209ENST00000512242 MTMR8Q96EF0 704 aa12.68□□□□□ -0.38
COPB2-209ENST00000512242 ESYT1Q9BSJ8 1104 aa12.68□□□□□ -0.38
COPB2-209ENST00000512242 SEZ6LQ9BYH1 1024 aa12.68□□□□□ -0.38
COPB2-209ENST00000512242 LSG1Q9H089 658 aaKnown RBP12.68□□□□□ -0.38
COPB2-209ENST00000512242 RIOX1Q9H6W3 641 aa12.68□□□□□ -0.38
COPB2-209ENST00000512242 IL23AQ9NPF7 189 aa12.68□□□□□ -0.38
COPB2-209ENST00000512242 ANO2Q9NQ90 1003 aa12.68□□□□□ -0.38
COPB2-209ENST00000512242 PXMP2Q9NR77 195 aa12.68□□□□□ -0.38
COPB2-209ENST00000512242 MRVI1Q9Y6F6 885 aa12.68□□□□□ -0.38
COPB2-209ENST00000512242 PNMA6FA0A0J9YX94 578 aa12.67□□□□□ -0.38
COPB2-209ENST00000512242 GCOM1H8Y6P7 765 aaPredicted RBP12.67□□□□□ -0.38
COPB2-209ENST00000512242 PRC1O43663 620 aa12.67□□□□□ -0.38
COPB2-209ENST00000512242 KPNA6O60684 536 aa12.67□□□□□ -0.38
COPB2-209ENST00000512242 POLR2MP0CAP2 368 aa12.67□□□□□ -0.38
COPB2-209ENST00000512242 RXRAP19793 462 aa12.67□□□□□ -0.38
COPB2-209ENST00000512242 DNAJB2P25686 324 aa12.67□□□□□ -0.38
COPB2-209ENST00000512242 HSD17B4P51659 736 aa12.67□□□□□ -0.38
COPB2-209ENST00000512242 PSRC1Q6PGN9 363 aaPredicted RBP12.67□□□□□ -0.38
COPB2-209ENST00000512242 DEFB128Q7Z7B8 93 aa12.67□□□□□ -0.38
COPB2-209ENST00000512242 RAB11FIP4Q86YS3 637 aa12.67□□□□□ -0.38
COPB2-209ENST00000512242 CTCFLQ8NI51 663 aaPredicted RBP12.67□□□□□ -0.38
COPB2-209ENST00000512242 MYLIPQ8WY64 445 aa12.67□□□□□ -0.38
COPB2-209ENST00000512242 MAF1Q9H063 256 aa12.67□□□□□ -0.38
COPB2-209ENST00000512242 WNT8AQ9H1J5 351 aa12.67□□□□□ -0.38
COPB2-209ENST00000512242 DDX41Q9UJV9 622 aaKnown RBP12.67□□□□□ -0.38
COPB2-209ENST00000512242 NOD1Q9Y239 953 aa12.67□□□□□ -0.38
COPB2-209ENST00000512242 SCN10AQ9Y5Y9 1956 aa12.67□□□□□ -0.38
COPB2-209ENST00000512242 CCDC69A6NI79 296 aa12.66□□□□□ -0.38
COPB2-209ENST00000512242 SLC27A2O14975 620 aa12.66□□□□□ -0.38
COPB2-209ENST00000512242 MMP3P08254 477 aa12.66□□□□□ -0.38
COPB2-209ENST00000512242 CASTP20810 708 aaKnown RBP12.66□□□□□ -0.38
COPB2-209ENST00000512242 MCM5P33992 734 aa12.66□□□□□ -0.38
COPB2-209ENST00000512242 PBX2P40425 430 aa12.66□□□□□ -0.38
COPB2-209ENST00000512242 ARHGAP1Q07960 439 aa12.66□□□□□ -0.38
COPB2-209ENST00000512242 TRAF1Q13077 416 aa12.66□□□□□ -0.38
COPB2-209ENST00000512242 COL9A3Q14050 684 aaPredicted RBP12.66□□□□□ -0.38
COPB2-209ENST00000512242 CREB3L3Q68CJ9 461 aa12.66□□□□□ -0.38
COPB2-209ENST00000512242 DHX37Q8IY37 1157 aaKnown RBP12.66□□□□□ -0.38
COPB2-209ENST00000512242 RPUSD2Q8IZ73 545 aaKnown RBP12.66□□□□□ -0.38
COPB2-209ENST00000512242 ZNF654Q8IZM8 581 aa12.66□□□□□ -0.38
COPB2-209ENST00000512242 CMTR1Q8N1G2 835 aaKnown RBP12.66□□□□□ -0.38
COPB2-209ENST00000512242 PDCD2LQ9BRP1 358 aa12.66□□□□□ -0.38
COPB2-209ENST00000512242 ALG1Q9BT22 464 aa12.66□□□□□ -0.38
COPB2-209ENST00000512242 LRRC2Q9BYS8 371 aa12.66□□□□□ -0.38
COPB2-209ENST00000512242 LY9Q9HBG7 655 aa12.66□□□□□ -0.38
COPB2-209ENST00000512242 CXXC1Q9P0U4 656 aaPredicted RBP12.66□□□□□ -0.38
COPB2-209ENST00000512242 SCN5AQ14524 2016 aa12.66□□□□□ -0.38
COPB2-209ENST00000512242 ZBBXA8MT70 800 aa12.65□□□□□ -0.38
COPB2-209ENST00000512242 KIF5BP33176 963 aa12.65□□□□□ -0.38
COPB2-209ENST00000512242 GRIN2CQ14957 1233 aa12.65□□□□□ -0.38
COPB2-209ENST00000512242 PGM5Q15124 567 aa12.65□□□□□ -0.38
COPB2-209ENST00000512242 PTGISQ16647 500 aa12.65□□□□□ -0.38
COPB2-209ENST00000512242 NFRKBQ6P4R8 1299 aa12.65□□□□□ -0.38
COPB2-209ENST00000512242 CENPQQ7L2Z9 268 aaPredicted RBP12.65□□□□□ -0.38
COPB2-209ENST00000512242 VSIG10LQ86VR7 867 aa12.65□□□□□ -0.38
COPB2-209ENST00000512242 CCDC82Q8N4S0 544 aa12.65□□□□□ -0.38
COPB2-209ENST00000512242 RETREG2Q8NC44 543 aa12.65□□□□□ -0.38
COPB2-209ENST00000512242 IL31RAQ8NI17 732 aa12.65□□□□□ -0.38
COPB2-209ENST00000512242 HERVK_113Q902F9 699 aa12.65□□□□□ -0.38
COPB2-209ENST00000512242 TIFAQ96CG3 184 aa12.65□□□□□ -0.38
COPB2-209ENST00000512242 RRP36Q96EU6 259 aaKnown RBP12.65□□□□□ -0.38
COPB2-209ENST00000512242 PBX4Q9BYU1 374 aa12.65□□□□□ -0.38
COPB2-209ENST00000512242 MTIF3Q9H2K0 278 aaKnown RBP12.65□□□□□ -0.38
COPB2-209ENST00000512242 ZNF576Q9H609 170 aa12.65□□□□□ -0.38
COPB2-209ENST00000512242 MAP3K20Q9NYL2 800 aaKnown RBP12.65□□□□□ -0.38
COPB2-209ENST00000512242 TET1Q8NFU7 2136 aa12.64□□□□□ -0.39
COPB2-209ENST00000512242 hCG_1642624A0A1W2PR95 340 aa12.64□□□□□ -0.39
COPB2-209ENST00000512242 DLL1O00548 723 aa12.64□□□□□ -0.39
COPB2-209ENST00000512242 SH2B2O14492 632 aaPredicted RBP12.64□□□□□ -0.39
COPB2-209ENST00000512242 RGS20O76081 388 aa12.64□□□□□ -0.39
COPB2-209ENST00000512242 PLEKHA8P1O95397 391 aa12.64□□□□□ -0.39
COPB2-209ENST00000512242 FOSL2P15408 326 aa12.64□□□□□ -0.39
COPB2-209ENST00000512242 CCND2P30279 289 aa12.64□□□□□ -0.39
COPB2-209ENST00000512242 LAMC2Q13753 1193 aa12.64□□□□□ -0.39
COPB2-209ENST00000512242 NECTIN1Q15223 517 aa12.64□□□□□ -0.39
COPB2-209ENST00000512242 DGKDQ16760 1214 aa12.64□□□□□ -0.39
COPB2-209ENST00000512242 TMTC2Q8N394 836 aa12.64□□□□□ -0.39
COPB2-209ENST00000512242 SAMD3Q8N6K7 520 aa12.64□□□□□ -0.39
COPB2-209ENST00000512242 SMARCC2Q8TAQ2 1214 aa12.64□□□□□ -0.39
COPB2-209ENST00000512242 GPKOWQ92917 476 aaPredicted RBP eCLIP12.64□□□□□ -0.392e-8■■■■□ 20.3
COPB2-209ENST00000512242 TMEM87BQ96K49 555 aa12.64□□□□□ -0.39
COPB2-209ENST00000512242 FTOQ9C0B1 505 aaKnown RBP eCLIP12.64□□□□□ -0.391e-7■■■□□ 18.7
COPB2-209ENST00000512242 RTEL1Q9NZ71 1219 aa12.64□□□□□ -0.39
COPB2-209ENST00000512242 SEC63Q9UGP8 760 aaKnown RBP12.64□□□□□ -0.39
COPB2-209ENST00000512242 MSRAQ9UJ68 235 aa12.64□□□□□ -0.39
COPB2-209ENST00000512242 CUL9Q8IWT3 2517 aa12.63□□□□□ -0.39
COPB2-209ENST00000512242 DDAH1O94760 285 aa12.63□□□□□ -0.39
COPB2-209ENST00000512242 GGPS1O95749 300 aa12.63□□□□□ -0.39
COPB2-209ENST00000512242 ZNF286BP0CG31 522 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms