RNA–Protein interactions for RNA: ENST00000511891.5

COPS4-211, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2

Gene COPS4, Length 558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-211ENST00000511891 LY6KQ17RY6 165 aa11.49□□□□□ -0.57
COPS4-211ENST00000511891 BMP2KLQ5H9B9 411 aa11.49□□□□□ -0.57
COPS4-211ENST00000511891 MFSD5Q6N075 450 aa11.49□□□□□ -0.57
COPS4-211ENST00000511891 CCDC62Q6P9F0 684 aa11.49□□□□□ -0.57
COPS4-211ENST00000511891 C16orf59Q7L2K0 433 aa11.49□□□□□ -0.57
COPS4-211ENST00000511891 RAB11FIP4Q86YS3 637 aa11.49□□□□□ -0.57
COPS4-211ENST00000511891 ZNF654Q8IZM8 581 aa11.49□□□□□ -0.57
COPS4-211ENST00000511891 ZFP91Q96JP5 570 aaPredicted RBP11.49□□□□□ -0.57
COPS4-211ENST00000511891 LRRC2Q9BYS8 371 aa11.49□□□□□ -0.57
COPS4-211ENST00000511891 PXMP2Q9NR77 195 aa11.49□□□□□ -0.57
COPS4-211ENST00000511891 POLR3EQ9NVU0 708 aa11.49□□□□□ -0.57
COPS4-211ENST00000511891 BAZ2BQ9UIF8 2168 aaKnown RBP11.49□□□□□ -0.57
COPS4-211ENST00000511891 LAMA3Q16787 3333 aa11.49□□□□□ -0.57
COPS4-211ENST00000511891 PNMA6FA0A0J9YX94 578 aa11.48□□□□□ -0.57
COPS4-211ENST00000511891 SH2B2O14492 632 aaPredicted RBP11.48□□□□□ -0.57
COPS4-211ENST00000511891 NKRFO15226 690 aaKnown RBP eCLIP11.48□□□□□ -0.57
COPS4-211ENST00000511891 NR3C2P08235 984 aa11.48□□□□□ -0.57
COPS4-211ENST00000511891 MYCLP12524 364 aaPredicted RBP11.48□□□□□ -0.57
COPS4-211ENST00000511891 RXRAP19793 462 aa11.48□□□□□ -0.57
COPS4-211ENST00000511891 NECTIN1Q15223 517 aa11.48□□□□□ -0.57
COPS4-211ENST00000511891 STXBP2Q15833 593 aa11.48□□□□□ -0.57
COPS4-211ENST00000511891 CASC1Q6TDU7 716 aa11.48□□□□□ -0.57
COPS4-211ENST00000511891 NFXL1Q6ZNB6 911 aa11.48□□□□□ -0.57
COPS4-211ENST00000511891 FCHSD1Q86WN1 690 aa11.48□□□□□ -0.57
COPS4-211ENST00000511891 IL31RAQ8NI17 732 aa11.48□□□□□ -0.57
COPS4-211ENST00000511891 AFG1LQ8WV93 481 aa11.48□□□□□ -0.57
COPS4-211ENST00000511891 IWS1Q96ST2 819 aa11.48□□□□□ -0.57
COPS4-211ENST00000511891 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.48□□□□□ -0.57
COPS4-211ENST00000511891 MTG1Q9BT17 334 aaPredicted RBP11.48□□□□□ -0.57
COPS4-211ENST00000511891 KRTAP3-3Q9BYR6 98 aa11.48□□□□□ -0.57
COPS4-211ENST00000511891 KRTAP3-2Q9BYR7 98 aa11.48□□□□□ -0.57
COPS4-211ENST00000511891 MAF1Q9H063 256 aa11.48□□□□□ -0.57
COPS4-211ENST00000511891 ALDH8A1Q9H2A2 487 aaPredicted RBP11.48□□□□□ -0.57
COPS4-211ENST00000511891 HIPK3Q9H422 1215 aa11.48□□□□□ -0.57
COPS4-211ENST00000511891 TRMT13Q9NUP7 481 aaKnown RBP11.48□□□□□ -0.57
COPS4-211ENST00000511891 POTEB3A0JP26 581 aa11.47□□□□□ -0.57
COPS4-211ENST00000511891 A6NJR5 290 aa11.47□□□□□ -0.57
COPS4-211ENST00000511891 SORBS3O60504 671 aa11.47□□□□□ -0.57
COPS4-211ENST00000511891 DDAH1O94760 285 aa11.47□□□□□ -0.57
COPS4-211ENST00000511891 PLEKHA8P1O95397 391 aa11.47□□□□□ -0.57
COPS4-211ENST00000511891 GH1P01241 217 aa11.47□□□□□ -0.57
COPS4-211ENST00000511891 CYP2C9P11712 490 aa11.47□□□□□ -0.57
COPS4-211ENST00000511891 MCM5P33992 734 aa11.47□□□□□ -0.57
COPS4-211ENST00000511891 CCL23P55773 120 aa11.47□□□□□ -0.57
COPS4-211ENST00000511891 CHMP4BP1P59074 171 aa11.47□□□□□ -0.57
COPS4-211ENST00000511891 GHRHRQ02643 423 aa11.47□□□□□ -0.57
COPS4-211ENST00000511891 PPIGQ13427 754 aaKnown RBP eCLIP11.47□□□□□ -0.57
COPS4-211ENST00000511891 NBPF20Q3BBV1 942 aa11.47□□□□□ -0.57
COPS4-211ENST00000511891 FAM47CQ5HY64 1035 aa11.47□□□□□ -0.57
COPS4-211ENST00000511891 TMEM240Q5SV17 173 aa11.47□□□□□ -0.57
COPS4-211ENST00000511891 FAM109BQ6ICB4 259 aaPredicted RBP11.47□□□□□ -0.57
COPS4-211ENST00000511891 POTEBQ6S5H4 581 aa11.47□□□□□ -0.57
COPS4-211ENST00000511891 CMTR1Q8N1G2 835 aaKnown RBP11.47□□□□□ -0.57
COPS4-211ENST00000511891 TMEM199Q8N511 208 aa11.47□□□□□ -0.57
COPS4-211ENST00000511891 GUCD1Q96NT3 240 aa11.47□□□□□ -0.57
COPS4-211ENST00000511891 PDCD2LQ9BRP1 358 aa11.47□□□□□ -0.57
COPS4-211ENST00000511891 NOC4LQ9BVI4 516 aaKnown RBP11.47□□□□□ -0.57
COPS4-211ENST00000511891 FAM205CA6NFA0 338 aa11.46□□□□□ -0.57
COPS4-211ENST00000511891 CCDC69A6NI79 296 aa11.46□□□□□ -0.57
COPS4-211ENST00000511891 GCOM1H8Y6P7 765 aaPredicted RBP11.46□□□□□ -0.57
COPS4-211ENST00000511891 EIF3JO75822 258 aaKnown RBP11.46□□□□□ -0.57
COPS4-211ENST00000511891 RGS20O76081 388 aa11.46□□□□□ -0.57
COPS4-211ENST00000511891 MMP3P08254 477 aa11.46□□□□□ -0.57
COPS4-211ENST00000511891 POLR2MP0CAP2 368 aa11.46□□□□□ -0.57
COPS4-211ENST00000511891 SMAD3P84022 425 aaKnown RBP11.46□□□□□ -0.57
COPS4-211ENST00000511891 ARHGAP1Q07960 439 aa11.46□□□□□ -0.57
COPS4-211ENST00000511891 PGM5Q15124 567 aa11.46□□□□□ -0.57
COPS4-211ENST00000511891 BRDTQ58F21 947 aaPredicted RBP11.46□□□□□ -0.57
COPS4-211ENST00000511891 ZNF697Q5TEC3 545 aa11.46□□□□□ -0.57
COPS4-211ENST00000511891 ZNF365Q70YC5 407 aa11.46□□□□□ -0.57
COPS4-211ENST00000511891 SRBD1Q8N5C6 995 aaKnown RBP11.46□□□□□ -0.57
COPS4-211ENST00000511891 CTCFLQ8NI51 663 aaPredicted RBP11.46□□□□□ -0.57
COPS4-211ENST00000511891 TMEM87BQ96K49 555 aa11.46□□□□□ -0.57
COPS4-211ENST00000511891 HS3ST6Q96QI5 342 aa11.46□□□□□ -0.57
COPS4-211ENST00000511891 WNT8AQ9H1J5 351 aa11.46□□□□□ -0.57
COPS4-211ENST00000511891 DDX41Q9UJV9 622 aaKnown RBP11.46□□□□□ -0.57
COPS4-211ENST00000511891 MRVI1Q9Y6F6 885 aa11.46□□□□□ -0.57
COPS4-211ENST00000511891 hCG_1642624A0A1W2PR95 340 aa11.45□□□□□ -0.58
COPS4-211ENST00000511891 KPNA6O60684 536 aa11.45□□□□□ -0.58
COPS4-211ENST00000511891 CDC45O75419 566 aa11.45□□□□□ -0.58
COPS4-211ENST00000511891 PYGBP11216 843 aa11.45□□□□□ -0.58
COPS4-211ENST00000511891 KIF5BP33176 963 aa11.45□□□□□ -0.58
COPS4-211ENST00000511891 GPKOWQ92917 476 aaPredicted RBP eCLIP11.45□□□□□ -0.58
COPS4-211ENST00000511891 RRP36Q96EU6 259 aaKnown RBP11.45□□□□□ -0.58
COPS4-211ENST00000511891 SCLYQ96I15 445 aa11.45□□□□□ -0.58
COPS4-211ENST00000511891 CCDC136Q96JN2 1154 aa11.45□□□□□ -0.58
COPS4-211ENST00000511891 TCEANC2Q96MN5 208 aa11.45□□□□□ -0.58
COPS4-211ENST00000511891 MAP3K14Q99558 947 aa11.45□□□□□ -0.58
COPS4-211ENST00000511891 MTA3Q9BTC8 594 aa11.45□□□□□ -0.58
COPS4-211ENST00000511891 SPZ1Q9BXG8 430 aa11.45□□□□□ -0.58
COPS4-211ENST00000511891 SEZ6LQ9BYH1 1024 aa11.45□□□□□ -0.58
COPS4-211ENST00000511891 TTYH1Q9H313 450 aaPredicted RBP11.45□□□□□ -0.58
COPS4-211ENST00000511891 SEMA6BQ9H3T3 888 aa11.45□□□□□ -0.58
COPS4-211ENST00000511891 IL23AQ9NPF7 189 aa11.45□□□□□ -0.58
COPS4-211ENST00000511891 STXBP5LQ9Y2K9 1186 aa11.45□□□□□ -0.58
COPS4-211ENST00000511891 SCN10AQ9Y5Y9 1956 aa11.45□□□□□ -0.58
COPS4-211ENST00000511891 GRXCR1A8MXD5 290 aa11.44□□□□□ -0.58
COPS4-211ENST00000511891 RBAK-RBAKDNI3L0D1 243 aa11.44□□□□□ -0.58
COPS4-211ENST00000511891 CCND2P30279 289 aa11.44□□□□□ -0.58
COPS4-211ENST00000511891 LIFRP42702 1097 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms