RNA–Protein interactions for RNA: ENST00000511732.1

COL1A1-213, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-213ENST00000511732 FGBP02675 491 aa17.76■□□□□ 0.43
COL1A1-213ENST00000511732 SUPT20HL2P0C7V6 817 aa17.76■□□□□ 0.43
COL1A1-213ENST00000511732 NFRKBQ6P4R8 1299 aa17.76■□□□□ 0.43
COL1A1-213ENST00000511732 OTOP2Q7RTS6 562 aa17.76■□□□□ 0.43
COL1A1-213ENST00000511732 CATIPQ7Z7H3 387 aa17.76■□□□□ 0.43
COL1A1-213ENST00000511732 IL31RAQ8NI17 732 aa17.76■□□□□ 0.43
COL1A1-213ENST00000511732 KAT2BQ92831 832 aa17.76■□□□□ 0.43
COL1A1-213ENST00000511732 ZFP91Q96JP5 570 aaPredicted RBP17.76■□□□□ 0.43
COL1A1-213ENST00000511732 SLC27A2O14975 620 aa17.75■□□□□ 0.43
COL1A1-213ENST00000511732 MYCLP12524 364 aaPredicted RBP17.75■□□□□ 0.43
COL1A1-213ENST00000511732 GRIN2CQ14957 1233 aa17.75■□□□□ 0.43
COL1A1-213ENST00000511732 PGM5Q15124 567 aa17.75■□□□□ 0.43
COL1A1-213ENST00000511732 NECTIN1Q15223 517 aa17.75■□□□□ 0.43
COL1A1-213ENST00000511732 VSIG10LQ86VR7 867 aa17.75■□□□□ 0.43
COL1A1-213ENST00000511732 ZNF654Q8IZM8 581 aa17.75■□□□□ 0.43
COL1A1-213ENST00000511732 SAMD3Q8N6K7 520 aa17.75■□□□□ 0.43
COL1A1-213ENST00000511732 PIBF1Q8WXW3 757 aa17.75■□□□□ 0.43
COL1A1-213ENST00000511732 TIFAQ96CG3 184 aa17.75■□□□□ 0.43
COL1A1-213ENST00000511732 MRVI1Q9Y6F6 885 aa17.75■□□□□ 0.43
COL1A1-213ENST00000511732 EYSQ5T1H1 3165 aa17.74■□□□□ 0.43
COL1A1-213ENST00000511732 TANC1Q9C0D5 1861 aa17.74■□□□□ 0.43
COL1A1-213ENST00000511732 GCOM1H8Y6P7 765 aaPredicted RBP17.74■□□□□ 0.43
COL1A1-213ENST00000511732 PRC1O43663 620 aa17.74■□□□□ 0.43
COL1A1-213ENST00000511732 POLR2MP0CAP2 368 aa17.74■□□□□ 0.43
COL1A1-213ENST00000511732 CHMP4BP1P59074 171 aa17.74■□□□□ 0.43
COL1A1-213ENST00000511732 PTPN11Q06124 597 aaPredicted RBP17.74■□□□□ 0.43
COL1A1-213ENST00000511732 FCHSD1Q86WN1 690 aa17.74■□□□□ 0.43
COL1A1-213ENST00000511732 EMID1Q96A84 441 aaPredicted RBP17.74■□□□□ 0.43
COL1A1-213ENST00000511732 CTAGE1Q96RT6 745 aa17.74■□□□□ 0.43
COL1A1-213ENST00000511732 MAP3K14Q99558 947 aa17.74■□□□□ 0.43
COL1A1-213ENST00000511732 ZNF576Q9H609 170 aa17.74■□□□□ 0.43
COL1A1-213ENST00000511732 DLL1O00548 723 aa17.73■□□□□ 0.43
COL1A1-213ENST00000511732 SH2B2O14492 632 aaPredicted RBP17.73■□□□□ 0.43
COL1A1-213ENST00000511732 SP2Q02086 613 aa17.73■□□□□ 0.43
COL1A1-213ENST00000511732 CREB3L3Q68CJ9 461 aa17.73■□□□□ 0.43
COL1A1-213ENST00000511732 CASC1Q6TDU7 716 aa17.73■□□□□ 0.43
COL1A1-213ENST00000511732 GPKOWQ92917 476 aaPredicted RBP eCLIP17.73■□□□□ 0.43
COL1A1-213ENST00000511732 MTA3Q9BTC8 594 aa17.73■□□□□ 0.43
COL1A1-213ENST00000511732 TRIP12Q14669 1992 aaPredicted RBP17.73■□□□□ 0.43
COL1A1-213ENST00000511732 SORBS3O60504 671 aa17.72■□□□□ 0.43
COL1A1-213ENST00000511732 DDAH1O94760 285 aa17.72■□□□□ 0.43
COL1A1-213ENST00000511732 PLEKHA8P1O95397 391 aa17.72■□□□□ 0.43
COL1A1-213ENST00000511732 IQCF3P0C7M6 154 aa17.72■□□□□ 0.43
COL1A1-213ENST00000511732 RXRAP19793 462 aa17.72■□□□□ 0.43
COL1A1-213ENST00000511732 CASTP20810 708 aaKnown RBP17.72■□□□□ 0.43
COL1A1-213ENST00000511732 MCM5P33992 734 aa17.72■□□□□ 0.43
COL1A1-213ENST00000511732 LAMC2Q13753 1193 aa17.72■□□□□ 0.43
COL1A1-213ENST00000511732 DGKDQ16760 1214 aa17.72■□□□□ 0.43
COL1A1-213ENST00000511732 BMP2KLQ5H9B9 411 aa17.72■□□□□ 0.43
COL1A1-213ENST00000511732 MYSM1Q5VVJ2 828 aa17.72■□□□□ 0.43
COL1A1-213ENST00000511732 GDF6Q6KF10 455 aaPredicted RBP17.72■□□□□ 0.43
COL1A1-213ENST00000511732 DEFB128Q7Z7B8 93 aa17.72■□□□□ 0.43
COL1A1-213ENST00000511732 SESTD1Q86VW0 696 aa17.72■□□□□ 0.43
COL1A1-213ENST00000511732 RPUSD2Q8IZ73 545 aaKnown RBP17.72■□□□□ 0.43
COL1A1-213ENST00000511732 CMTR1Q8N1G2 835 aaKnown RBP17.72■□□□□ 0.43
COL1A1-213ENST00000511732 MAFAQ8NHW3 353 aaPredicted RBP17.72■□□□□ 0.43
COL1A1-213ENST00000511732 SPZ1Q9BXG8 430 aa17.72■□□□□ 0.43
COL1A1-213ENST00000511732 ANO2Q9NQ90 1003 aa17.72■□□□□ 0.43
COL1A1-213ENST00000511732 RBAK-RBAKDNI3L0D1 243 aa17.71■□□□□ 0.43
COL1A1-213ENST00000511732 FOSL2P15408 326 aa17.71■□□□□ 0.43
COL1A1-213ENST00000511732 TRAF1Q13077 416 aa17.71■□□□□ 0.43
COL1A1-213ENST00000511732 PTGISQ16647 500 aa17.71■□□□□ 0.43
COL1A1-213ENST00000511732 HSDL1Q3SXM5 330 aa17.71■□□□□ 0.43
COL1A1-213ENST00000511732 CENPQQ7L2Z9 268 aaPredicted RBP17.71■□□□□ 0.43
COL1A1-213ENST00000511732 RAB11FIP4Q86YS3 637 aa17.71■□□□□ 0.43
COL1A1-213ENST00000511732 DHX37Q8IY37 1157 aaKnown RBP17.71■□□□□ 0.43
COL1A1-213ENST00000511732 SRBD1Q8N5C6 995 aaKnown RBP17.71■□□□□ 0.43
COL1A1-213ENST00000511732 PPTC7Q8NI37 304 aa17.71■□□□□ 0.43
COL1A1-213ENST00000511732 CTCFLQ8NI51 663 aaPredicted RBP17.71■□□□□ 0.43
COL1A1-213ENST00000511732 TMEM87BQ96K49 555 aa17.71■□□□□ 0.43
COL1A1-213ENST00000511732 LRRC2Q9BYS8 371 aa17.71■□□□□ 0.43
COL1A1-213ENST00000511732 BCAS3Q9H6U6 928 aa17.71■□□□□ 0.43
COL1A1-213ENST00000511732 YBX2Q9Y2T7 364 aaKnown RBP17.71■□□□□ 0.43
COL1A1-213ENST00000511732 DOCK5Q9H7D0 1870 aa17.7■□□□□ 0.42
COL1A1-213ENST00000511732 HAS3O00219 553 aa17.7■□□□□ 0.42
COL1A1-213ENST00000511732 PITPNM1O00562 1244 aa17.7■□□□□ 0.42
COL1A1-213ENST00000511732 GGPS1O95749 300 aa17.7■□□□□ 0.42
COL1A1-213ENST00000511732 F2P00734 622 aa17.7■□□□□ 0.42
COL1A1-213ENST00000511732 ZNF286BP0CG31 522 aa17.7■□□□□ 0.42
COL1A1-213ENST00000511732 HOXD8P13378 290 aaPredicted RBP17.7■□□□□ 0.42
COL1A1-213ENST00000511732 UBA1P22314 1058 aaKnown RBP17.7■□□□□ 0.42
COL1A1-213ENST00000511732 SMARCA1P28370 1054 aa17.7■□□□□ 0.42
COL1A1-213ENST00000511732 CCND2P30279 289 aa17.7■□□□□ 0.42
COL1A1-213ENST00000511732 PSEN2P49810 448 aa17.7■□□□□ 0.42
COL1A1-213ENST00000511732 RABGGTBP53611 331 aa17.7■□□□□ 0.42
COL1A1-213ENST00000511732 MRPS9P82933 396 aaKnown RBP17.7■□□□□ 0.42
COL1A1-213ENST00000511732 CELF3Q5SZQ8 465 aaKnown RBP17.7■□□□□ 0.42
COL1A1-213ENST00000511732 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.7■□□□□ 0.42
COL1A1-213ENST00000511732 MTIF3Q9H2K0 278 aaKnown RBP17.7■□□□□ 0.42
COL1A1-213ENST00000511732 HDAC6Q9UBN7 1215 aa17.7■□□□□ 0.42
COL1A1-213ENST00000511732 FRMPD4Q14CM0 1322 aa17.7■□□□□ 0.42
COL1A1-213ENST00000511732 UNC80Q8N2C7 3258 aa17.69■□□□□ 0.42
COL1A1-213ENST00000511732 TET1Q8NFU7 2136 aa17.69■□□□□ 0.42
COL1A1-213ENST00000511732 CCDC69A6NI79 296 aa17.69■□□□□ 0.42
COL1A1-213ENST00000511732 KIF5BP33176 963 aa17.69■□□□□ 0.42
COL1A1-213ENST00000511732 LIFRP42702 1097 aa17.69■□□□□ 0.42
COL1A1-213ENST00000511732 HIC1Q14526 733 aa17.69■□□□□ 0.42
COL1A1-213ENST00000511732 GPNMBQ14956 572 aa17.69■□□□□ 0.42
COL1A1-213ENST00000511732 KCNV1Q6PIU1 500 aa17.69■□□□□ 0.42
COL1A1-213ENST00000511732 USP17L6PQ6QN14 398 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms