RNA–Protein interactions for RNA: ENST00000510951.5

NR1I3-227, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 774 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-227ENST00000510951 BRMS1Q9HCU9 246 aa11.9□□□□□ -0.5
NR1I3-227ENST00000510951 PDGFCQ9NRA1 345 aa11.9□□□□□ -0.5
NR1I3-227ENST00000510951 KIF3AQ9Y496 699 aa11.9□□□□□ -0.5
NR1I3-227ENST00000510951 LOC102724159A0A0B4J2E5 919 aa11.89□□□□□ -0.51
NR1I3-227ENST00000510951 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.89□□□□□ -0.51
NR1I3-227ENST00000510951 FAM205CA6NFA0 338 aa11.89□□□□□ -0.51
NR1I3-227ENST00000510951 ADCY6O43306 1168 aa11.89□□□□□ -0.51
NR1I3-227ENST00000510951 FOSP01100 380 aaPredicted RBP11.89□□□□□ -0.51
NR1I3-227ENST00000510951 SREBF1P36956 1147 aa11.89□□□□□ -0.51
NR1I3-227ENST00000510951 ADCYAP1R1P41586 468 aa11.89□□□□□ -0.51
NR1I3-227ENST00000510951 PWP2Q15269 919 aaKnown RBP11.89□□□□□ -0.51
NR1I3-227ENST00000510951 STXBP2Q15833 593 aa11.89□□□□□ -0.51
NR1I3-227ENST00000510951 CCDC144BQ3MJ40 725 aa11.89□□□□□ -0.51
NR1I3-227ENST00000510951 PCNX4Q63HM2 1172 aa11.89□□□□□ -0.51
NR1I3-227ENST00000510951 GALNT17Q6IS24 598 aa11.89□□□□□ -0.51
NR1I3-227ENST00000510951 DIS3L2Q8IYB7 885 aaKnown RBP11.89□□□□□ -0.51
NR1I3-227ENST00000510951 FAM177A1Q8N128 213 aaPredicted RBP11.89□□□□□ -0.51
NR1I3-227ENST00000510951 VTA1Q9NP79 307 aa11.89□□□□□ -0.51
NR1I3-227ENST00000510951 RTEL1Q9NZ71 1219 aa11.89□□□□□ -0.51
NR1I3-227ENST00000510951 BRCA2P51587 3418 aa11.89□□□□□ -0.51
NR1I3-227ENST00000510951 WDR81Q562E7 1941 aa11.88□□□□□ -0.51
NR1I3-227ENST00000510951 CCDC194A0A1B0GVG4 234 aa11.88□□□□□ -0.51
NR1I3-227ENST00000510951 BTBD18B2RXH4 712 aa11.88□□□□□ -0.51
NR1I3-227ENST00000510951 M0R2N6 131 aa11.88□□□□□ -0.51
NR1I3-227ENST00000510951 SEPT4O43236 478 aa11.88□□□□□ -0.51
NR1I3-227ENST00000510951 AKR1A1P14550 325 aa11.88□□□□□ -0.51
NR1I3-227ENST00000510951 MRPS9P82933 396 aaKnown RBP11.88□□□□□ -0.51
NR1I3-227ENST00000510951 ARHGAP4P98171 946 aa11.88□□□□□ -0.51
NR1I3-227ENST00000510951 TMEM63BQ5T3F8 832 aa11.88□□□□□ -0.51
NR1I3-227ENST00000510951 GJC2Q5T442 439 aaPredicted RBP11.88□□□□□ -0.51
NR1I3-227ENST00000510951 TAPT1Q6NXT6 567 aa11.88□□□□□ -0.51
NR1I3-227ENST00000510951 PIK3AP1Q6ZUJ8 805 aa11.88□□□□□ -0.51
NR1I3-227ENST00000510951 KRT25Q7Z3Z0 450 aa11.88□□□□□ -0.51
NR1I3-227ENST00000510951 VSIG10LQ86VR7 867 aa11.88□□□□□ -0.51
NR1I3-227ENST00000510951 DEFB118Q96PH6 123 aa11.88□□□□□ -0.51
NR1I3-227ENST00000510951 DDX20Q9UHI6 824 aaKnown RBP11.88□□□□□ -0.51
NR1I3-227ENST00000510951 NRBP1Q9UHY1 535 aa11.88□□□□□ -0.51
NR1I3-227ENST00000510951 CCDC85CA6NKD9 419 aa11.87□□□□□ -0.51
NR1I3-227ENST00000510951 H3BQV1 296 aa11.87□□□□□ -0.51
NR1I3-227ENST00000510951 SORBS3O60504 671 aa11.87□□□□□ -0.51
NR1I3-227ENST00000510951 EIF3JO75822 258 aaKnown RBP11.87□□□□□ -0.51
NR1I3-227ENST00000510951 RGS20O76081 388 aa11.87□□□□□ -0.51
NR1I3-227ENST00000510951 ARIH2O95376 493 aa11.87□□□□□ -0.51
NR1I3-227ENST00000510951 MYCNP04198 464 aaPredicted RBP11.87□□□□□ -0.51
NR1I3-227ENST00000510951 SOX10P56693 466 aa11.87□□□□□ -0.51
NR1I3-227ENST00000510951 GNL2Q13823 731 aaKnown RBP11.87□□□□□ -0.51
NR1I3-227ENST00000510951 BECN1Q14457 450 aa11.87□□□□□ -0.51
NR1I3-227ENST00000510951 NONOQ15233 471 aaKnown RBP eCLIP11.87□□□□□ -0.51
NR1I3-227ENST00000510951 SAFBQ15424 915 aaKnown RBP eCLIP11.87□□□□□ -0.51
NR1I3-227ENST00000510951 INF2Q27J81 1249 aa11.87□□□□□ -0.51
NR1I3-227ENST00000510951 EARS2Q5JPH6 523 aaKnown RBP11.87□□□□□ -0.51
NR1I3-227ENST00000510951 IFFO2Q5TF58 517 aa11.87□□□□□ -0.51
NR1I3-227ENST00000510951 TEX2Q8IWB9 1127 aa11.87□□□□□ -0.51
NR1I3-227ENST00000510951 FBXO18Q8NFZ0 1043 aa11.87□□□□□ -0.51
NR1I3-227ENST00000510951 TBCKQ8TEA7 893 aa11.87□□□□□ -0.51
NR1I3-227ENST00000510951 INTS4Q96HW7 963 aaKnown RBP11.87□□□□□ -0.51
NR1I3-227ENST00000510951 TMEM106CQ9BVX2 250 aa11.87□□□□□ -0.51
NR1I3-227ENST00000510951 WDR11Q9BZH6 1224 aa11.87□□□□□ -0.51
NR1I3-227ENST00000510951 PAK6Q9NQU5 681 aaPredicted RBP11.87□□□□□ -0.51
NR1I3-227ENST00000510951 PKD2L1Q9P0L9 805 aa11.87□□□□□ -0.51
NR1I3-227ENST00000510951 FAM184BQ9ULE4 1060 aa11.87□□□□□ -0.51
NR1I3-227ENST00000510951 MRVI1Q9Y6F6 885 aa11.87□□□□□ -0.51
NR1I3-227ENST00000510951 POTEFA5A3E0 1075 aa11.86□□□□□ -0.51
NR1I3-227ENST00000510951 VPS37CA5D8V6 355 aaPredicted RBP11.86□□□□□ -0.51
NR1I3-227ENST00000510951 KIF28PB7ZC32 967 aa11.86□□□□□ -0.51
NR1I3-227ENST00000510951 RARBP10826 455 aa11.86□□□□□ -0.51
NR1I3-227ENST00000510951 SMPD1P17405 629 aa11.86□□□□□ -0.51
NR1I3-227ENST00000510951 ITGB5P18084 799 aa11.86□□□□□ -0.51
NR1I3-227ENST00000510951 ZNF76P36508 570 aa11.86□□□□□ -0.51
NR1I3-227ENST00000510951 TNFAIP2Q03169 654 aa11.86□□□□□ -0.51
NR1I3-227ENST00000510951 LARP1BQ659C4 914 aaKnown RBP11.86□□□□□ -0.51
NR1I3-227ENST00000510951 MCTP2Q6DN12 878 aa11.86□□□□□ -0.51
NR1I3-227ENST00000510951 MCTP1Q6DN14 999 aa11.86□□□□□ -0.51
NR1I3-227ENST00000510951 CYP2W1Q8TAV3 490 aa11.86□□□□□ -0.51
NR1I3-227ENST00000510951 U2AF1L4Q8WU68 220 aaKnown RBP11.86□□□□□ -0.51
NR1I3-227ENST00000510951 SCFD2Q8WU76 684 aa11.86□□□□□ -0.51
NR1I3-227ENST00000510951 COPS5Q92905 334 aa11.86□□□□□ -0.51
NR1I3-227ENST00000510951 TNFRSF25Q93038 417 aa11.86□□□□□ -0.51
NR1I3-227ENST00000510951 UIMC1Q96RL1 719 aa11.86□□□□□ -0.51
NR1I3-227ENST00000510951 SYNRGQ9UMZ2 1314 aa11.86□□□□□ -0.51
NR1I3-227ENST00000510951 FAM86B1E9PN63 330 aa11.85□□□□□ -0.51
NR1I3-227ENST00000510951 MSCO60682 206 aa11.85□□□□□ -0.51
NR1I3-227ENST00000510951 STAM2O75886 525 aa11.85□□□□□ -0.51
NR1I3-227ENST00000510951 TDP2O95551 362 aa11.85□□□□□ -0.51
NR1I3-227ENST00000510951 PGK1P00558 417 aa11.85□□□□□ -0.51
NR1I3-227ENST00000510951 GJB1P08034 283 aa11.85□□□□□ -0.51
NR1I3-227ENST00000510951 FAM86B2P0C5J1 330 aa11.85□□□□□ -0.51
NR1I3-227ENST00000510951 TXNP10599 105 aaKnown RBP11.85□□□□□ -0.51
NR1I3-227ENST00000510951 UBA1P22314 1058 aaKnown RBP11.85□□□□□ -0.51
NR1I3-227ENST00000510951 IRX5P78411 483 aaPredicted RBP11.85□□□□□ -0.51
NR1I3-227ENST00000510951 SEMA3FQ13275 785 aa11.85□□□□□ -0.51
NR1I3-227ENST00000510951 MTMR1Q13613 665 aa11.85□□□□□ -0.51
NR1I3-227ENST00000510951 TTLL4Q14679 1199 aa11.85□□□□□ -0.51
NR1I3-227ENST00000510951 LY6KQ17RY6 165 aa11.85□□□□□ -0.51
NR1I3-227ENST00000510951 LETM2Q2VYF4 491 aa11.85□□□□□ -0.51
NR1I3-227ENST00000510951 GNPTABQ3T906 1256 aa11.85□□□□□ -0.51
NR1I3-227ENST00000510951 XRRA1Q6P2D8 792 aa11.85□□□□□ -0.51
NR1I3-227ENST00000510951 TLK2Q86UE8 772 aa11.85□□□□□ -0.51
NR1I3-227ENST00000510951 NLRX1Q86UT6 975 aa11.85□□□□□ -0.51
NR1I3-227ENST00000510951 CRYGNQ8WXF5 182 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms