RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 RIPK3Q9Y572 518 aa10.15□□□□□ -0.78
PDPN-209ENST00000510906 NR2E3Q9Y5X4 410 aa10.15□□□□□ -0.78
PDPN-209ENST00000510906 ZNF236Q9UL36 1845 aa10.14□□□□□ -0.79
PDPN-209ENST00000510906 ATP2A1O14983 1001 aa10.14□□□□□ -0.79
PDPN-209ENST00000510906 COL6A1P12109 1028 aa10.14□□□□□ -0.79
PDPN-209ENST00000510906 GSPT1P15170 499 aaKnown RBP10.14□□□□□ -0.79
PDPN-209ENST00000510906 COPB2P35606 906 aa10.14□□□□□ -0.79
PDPN-209ENST00000510906 SLC1A4P43007 532 aa10.14□□□□□ -0.79
PDPN-209ENST00000510906 NOVP48745 357 aa10.14□□□□□ -0.79
PDPN-209ENST00000510906 MFAP1P55081 439 aaKnown RBP10.14□□□□□ -0.79
PDPN-209ENST00000510906 OCLNQ16625 522 aa10.14□□□□□ -0.79
PDPN-209ENST00000510906 ANO1Q5XXA6 986 aa10.14□□□□□ -0.79
PDPN-209ENST00000510906 KCTD1Q719H9 257 aa10.14□□□□□ -0.79
PDPN-209ENST00000510906 IL25Q9H293 177 aa10.14□□□□□ -0.79
PDPN-209ENST00000510906 MTMR7Q9Y216 660 aa10.14□□□□□ -0.79
PDPN-209ENST00000510906 CTDP1Q9Y5B0 961 aaPredicted RBP10.14□□□□□ -0.79
PDPN-209ENST00000510906 PARP14Q460N5 1801 aa10.13□□□□□ -0.79
PDPN-209ENST00000510906 M0R2N6 131 aa10.13□□□□□ -0.79
PDPN-209ENST00000510906 HIP1O00291 1037 aa10.13□□□□□ -0.79
PDPN-209ENST00000510906 MSCO60682 206 aa10.13□□□□□ -0.79
PDPN-209ENST00000510906 FSHRP23945 695 aa10.13□□□□□ -0.79
PDPN-209ENST00000510906 STAT2P52630 851 aa10.13□□□□□ -0.79
PDPN-209ENST00000510906 SNAP25P60880 206 aa10.13□□□□□ -0.79
PDPN-209ENST00000510906 IKQ13123 557 aaPredicted RBP10.13□□□□□ -0.79
PDPN-209ENST00000510906 ZNF792Q3KQV3 632 aa10.13□□□□□ -0.79
PDPN-209ENST00000510906 AKNAD1Q5T1N1 836 aa10.13□□□□□ -0.79
PDPN-209ENST00000510906 SND1Q7KZF4 910 aaKnown RBP eCLIP10.13□□□□□ -0.79
PDPN-209ENST00000510906 C7orf61Q8IZ16 206 aa10.13□□□□□ -0.79
PDPN-209ENST00000510906 STAG1Q8WVM7 1258 aa10.13□□□□□ -0.79
PDPN-209ENST00000510906 ZNF536O15090 1300 aa10.12□□□□□ -0.79
PDPN-209ENST00000510906 NEDD4P46934 1319 aa10.12□□□□□ -0.79
PDPN-209ENST00000510906 WNT7AO00755 349 aa10.12□□□□□ -0.79
PDPN-209ENST00000510906 SEPT4O43236 478 aa10.12□□□□□ -0.79
PDPN-209ENST00000510906 ADH1CP00326 375 aa10.12□□□□□ -0.79
PDPN-209ENST00000510906 TOP1P11387 765 aaKnown RBP10.12□□□□□ -0.79
PDPN-209ENST00000510906 TAL1P17542 331 aaPredicted RBP10.12□□□□□ -0.79
PDPN-209ENST00000510906 OAZ1P54368 228 aa10.12□□□□□ -0.79
PDPN-209ENST00000510906 RAB15P59190 212 aa10.12□□□□□ -0.79
PDPN-209ENST00000510906 CCDC96Q2M329 555 aa10.12□□□□□ -0.79
PDPN-209ENST00000510906 TTC22Q5TAA0 569 aa10.12□□□□□ -0.79
PDPN-209ENST00000510906 RCSD1Q6JBY9 416 aa10.12□□□□□ -0.79
PDPN-209ENST00000510906 MFSD6Q6ZSS7 791 aa10.12□□□□□ -0.79
PDPN-209ENST00000510906 FAM160B2Q86V87 743 aa10.12□□□□□ -0.79
PDPN-209ENST00000510906 CHURC1Q8WUH1 139 aa10.12□□□□□ -0.79
PDPN-209ENST00000510906 DDX11Q96FC9 970 aa10.12□□□□□ -0.79
PDPN-209ENST00000510906 AGBL1Q96MI9 1066 aa10.12□□□□□ -0.79
PDPN-209ENST00000510906 TMEM47Q9BQJ4 181 aa10.12□□□□□ -0.79
PDPN-209ENST00000510906 TINF2Q9BSI4 451 aa10.12□□□□□ -0.79
PDPN-209ENST00000510906 HOMER2Q9NSB8 354 aa10.12□□□□□ -0.79
PDPN-209ENST00000510906 TCP11L1Q9NUJ3 509 aa10.12□□□□□ -0.79
PDPN-209ENST00000510906 PRR12Q9ULL5 1215 aa10.12□□□□□ -0.79
PDPN-209ENST00000510906 ZMYND8Q9ULU4 1186 aaPredicted RBP10.12□□□□□ -0.79
PDPN-209ENST00000510906 DIS3Q9Y2L1 958 aaKnown RBP10.12□□□□□ -0.79
PDPN-209ENST00000510906 FRMPD2Q68DX3 1309 aaPredicted RBP10.11□□□□□ -0.79
PDPN-209ENST00000510906 DNAJC25-GNG10A0A024R161 153 aa10.11□□□□□ -0.79
PDPN-209ENST00000510906 SFI1A8K8P3 1242 aa10.11□□□□□ -0.79
PDPN-209ENST00000510906 ZNF213O14771 459 aa10.11□□□□□ -0.79
PDPN-209ENST00000510906 PLA2G6O60733 806 aa10.11□□□□□ -0.79
PDPN-209ENST00000510906 SLC16A2P36021 539 aa10.11□□□□□ -0.79
PDPN-209ENST00000510906 DHX9Q08211 1270 aaKnown RBP10.11□□□□□ -0.79
PDPN-209ENST00000510906 LRRC26Q2I0M4 334 aa10.11□□□□□ -0.79
PDPN-209ENST00000510906 GJC2Q5T442 439 aaPredicted RBP10.11□□□□□ -0.79
PDPN-209ENST00000510906 TTBK2Q6IQ55 1244 aa10.11□□□□□ -0.79
PDPN-209ENST00000510906 CCDC174Q6PII3 467 aa10.11□□□□□ -0.79
PDPN-209ENST00000510906 ANKRD35Q8N283 1001 aa10.11□□□□□ -0.79
PDPN-209ENST00000510906 RGS22Q8NE09 1264 aa10.11□□□□□ -0.79
PDPN-209ENST00000510906 CHST13Q8NET6 341 aa10.11□□□□□ -0.79
PDPN-209ENST00000510906 DCAF4Q8WV16 495 aa10.11□□□□□ -0.79
PDPN-209ENST00000510906 ZKSCAN3Q9BRR0 538 aa10.11□□□□□ -0.79
PDPN-209ENST00000510906 DSCC1Q9BVC3 393 aa10.11□□□□□ -0.79
PDPN-209ENST00000510906 COL25A1Q9BXS0 654 aaPredicted RBP10.11□□□□□ -0.79
PDPN-209ENST00000510906 SENP6Q9GZR1 1112 aaPredicted RBP10.11□□□□□ -0.79
PDPN-209ENST00000510906 PRO3102Q9H379 93 aa10.11□□□□□ -0.79
PDPN-209ENST00000510906 RNF41Q9H4P4 317 aaPredicted RBP10.11□□□□□ -0.79
PDPN-209ENST00000510906 FBXO40Q9UH90 709 aa10.11□□□□□ -0.79
PDPN-209ENST00000510906 COL11A1P12107 1806 aaPredicted RBP10.11□□□□□ -0.79
PDPN-209ENST00000510906 MYH4Q9Y623 1939 aa10.1□□□□□ -0.79
PDPN-209ENST00000510906 DNM1LO00429 736 aa10.1□□□□□ -0.79
PDPN-209ENST00000510906 ZNF865P0CJ78 1059 aaPredicted RBP10.1□□□□□ -0.79
PDPN-209ENST00000510906 PDHBP11177 359 aa10.1□□□□□ -0.79
PDPN-209ENST00000510906 PCP11498 1178 aaKnown RBP10.1□□□□□ -0.79
PDPN-209ENST00000510906 ALAS1P13196 640 aa10.1□□□□□ -0.79
PDPN-209ENST00000510906 SYN1P17600 705 aa10.1□□□□□ -0.79
PDPN-209ENST00000510906 MMRN1Q13201 1228 aa10.1□□□□□ -0.79
PDPN-209ENST00000510906 ESR2Q92731 530 aa10.1□□□□□ -0.79
PDPN-209ENST00000510906 LENG1Q96BZ8 264 aaPredicted RBP10.1□□□□□ -0.79
PDPN-209ENST00000510906 FGD4Q96M96 766 aa10.1□□□□□ -0.79
PDPN-209ENST00000510906 ACAD9Q9H845 621 aa10.1□□□□□ -0.79
PDPN-209ENST00000510906 RNF146Q9NTX7 359 aa10.1□□□□□ -0.79
PDPN-209ENST00000510906 CXXC1Q9P0U4 656 aaPredicted RBP10.1□□□□□ -0.79
PDPN-209ENST00000510906 NRBP1Q9UHY1 535 aa10.1□□□□□ -0.79
PDPN-209ENST00000510906 RBM19Q9Y4C8 960 aaKnown RBP10.1□□□□□ -0.79
PDPN-209ENST00000510906 B4E1Z4 1266 aa10.09□□□□□ -0.79
PDPN-209ENST00000510906 SNAI1O95863 264 aaPredicted RBP10.09□□□□□ -0.79
PDPN-209ENST00000510906 CHMLP26374 656 aa10.09□□□□□ -0.79
PDPN-209ENST00000510906 SLC19A1P41440 591 aa10.09□□□□□ -0.79
PDPN-209ENST00000510906 CNTN2Q02246 1040 aa10.09□□□□□ -0.79
PDPN-209ENST00000510906 NR5A1Q13285 461 aa10.09□□□□□ -0.79
PDPN-209ENST00000510906 ARID5BQ14865 1188 aa10.09□□□□□ -0.79
PDPN-209ENST00000510906 LRRC41Q15345 812 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms